LOC110526901


Basic Information

Item Value
gene id LOC110526901
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 44402811 ~ 44409947 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110526901
ATGTCCACCCACTTAGAGGGTGATACAGACATATCCCGCTATCTGTGGATATTGTGTCTTTTTACCTTTTCCTGTGAACTCAGGGCTGAGGTGCAGAGCAAGCTCCACTTAGACCAGGACTATTCCTGTGAGGTGGTGGGGAGCTGGAATACCTGGTACGGGGACCAAGACCAAGCGGTGCACCTATGCGGTATTCAGCAGGCTACCCTGCATTGGACGCTTAACCAAATTGAACAATAATCAAGAGTATCTGGAGTTCCAGAAGGAGAGGATAATTTGCTGGTCTCATGCAGAACCAGCTTCTCTTAGAGTTCTGTTTCTGGAATGAGCCATCACCCAGACCGGGACAGAACATTTTAAACATACATTCATACAAACTCAAGCCTGGATCAATGATCGAATGAGGGAATCACTGGGCACGGGCGATCAAATACAGACAGGAGAATGACGAGGCAGTTGGAGGGTTCTTCTCACAGGTAGGAGACCTGTATGAAGTTCATCATCTGTGGGTTTATAAAGACCTCCAGTCCAGAGATGATACCAAAAACTTTCTTGCTGAAGGAGGGATGGGATTCTAGTGTGTATTTCACAGactga

Function

NR:

description
PREDICTED: protein NipSnap homolog 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110526901 True 597 mRNA 0.47 8 44402811 44409947

Neighbor

gene id symbol gene type direction distance location
LOC110526015 gatsl3 coding downstream 8792 44365856 ~ 44394019 (-)
fbxw8 fbxw8 coding downstream 57362 44309894 ~ 44345449 (-)
nf2a nf2 coding downstream 130425 44209338 ~ 44272386 (-)
LOC110526006 LOC106584969 coding downstream 303680 44045046 ~ 44099131 (-)
prodhb LOC100194675 coding downstream 447554 43940790 ~ 43955257 (-)
lrrc74b lrrc74b coding upstream 1749 44411696 ~ 44435774 (-)
nos1 LOC106585241 coding upstream 26345 44436292 ~ 44501179 (-)
LOC110526017 LOC106585243 coding upstream 126062 44536009 ~ 44592618 (-)
LOC118965027 LOC106585243 coding upstream 233900 44643847 ~ 44717089 (-)
LOC110526019 cirbp coding upstream 307569 44717516 ~ 44718429 (-)
G511379 NA non-coding downstream 47559 44354935 ~ 44355252 (-)
G511376 NA non-coding downstream 50821 44350427 ~ 44351990 (-)
G511375 NA non-coding downstream 52648 44349657 ~ 44350163 (-)
G511345 NA non-coding downstream 118231 44284274 ~ 44284580 (-)
G511885 NA non-coding upstream 113956 44523903 ~ 44550277 (-)
G511957 NA non-coding upstream 232452 44642399 ~ 44642599 (-)
G511958 NA non-coding upstream 233338 44643285 ~ 44643534 (-)
G510310 NA other downstream 878703 43523714 ~ 43524108 (-)
G509952 NA other downstream 1277424 43124581 ~ 43125387 (-)
G509949 LOC106578716 other downstream 1279719 43122546 ~ 43123092 (-)
znrf3 LOC106584905 other upstream 864691 45270568 ~ 45384850 (-)
apba1a apba1 other upstream 1949941 46263121 ~ 46360886 (-)
LOC110526044 LOC107699739 other upstream 1960743 46367701 ~ 46430607 (-)
G514434 NA other upstream 2500711 46910658 ~ 46910950 (-)
G514777 NA other upstream 2606215 47016162 ~ 47016496 (-)

Expression


Co-expression Network