lrrc74b (lrrc74b)


Basic Information

Item Value
gene id lrrc74b
gene name lrrc74b
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 44411696 ~ 44435774 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606593.2
CTGAGCCAAGGTATGTTGCGGCAGCAGCCAAAAAGTTTACTGCACTGATTTCTAACACACTTAGATTTACATCAGCACATTCAAACTAGCAAAACTACCTGTGAAAGCTTACAAGCAACAACATATATTGGGTGGAAGACATTGTGTTGGAACCATGGTCGTTGGGAAGAAGTTGGCCAAAGAGTCCCTGCTGCCGTCTGTGCTGGAGGATGATGACGCggagacggagagcgagagagcgcagCTGGGTGGGATAGGGAGCCGACCACCCAGCAGACCCAGGAAAGCTTTCAGTAGGGGAAGTGTTGACAGACAGACAGTGACCCGGTCAGGGTCCGGCCGCCACTCTAGCCCTGAGGGGGAGGTGTCAGTCAGGGGTGAGAGAAaggaggatgagggggaggaggaggaagaagagggcaGTGGCGTTGGCGATGGAGACTcacaggagagggggaaggaatgtGTCATCACAGCTTCAGATGAGGACTATGACACAGACTTGGAGCTGGGAGATGTGAAGGAGGCGTATGACCCGACGGGCCAGACTCGATACAAGGAGGCGTGTAGAATGTTCAACGTAGTCCCTGTATCCTATTTCCTGAAACACATGGGCAATACTGAGCTAACCATGATGCACCATGGCCTCGGGCCTCAGGGCACCAAAGCACTGGCGGTTTCCTTGGTAACCAACACTTCCCTCCTGAAGCTGAACCTCAGGGATAATTGCATGGAAGGGACTGGCGGGGCTGCCATGGCCGAGATGTTAAAGGAGAACTGTTACATCACAGAGGTGGACCTGGGGGAGAACAGGCTGGGGGATTGTGGTGCCCAGACCCTGTCCAGTATGCTGCAGGAGAACACCACACTGGTCTCACTCAGCATGTCTGGGAACGAGCTGGCTGACCGGGCCGCACAACACCTGGCCCAGACCCTGACCTCCAACACCAAGCTGGAGACCCTAGACCTCAGTCACAACACCATAGGAGATGCAGCAGGTCAGGTCCTGGGACATGCTATCGCTGAGAACACAGGGCTGAGATCATTGAGTCTGGCCTGGAACTGTATACGTGGGAAAGGAGCGGTGGCTTTGGCTAAAGGCCTTGGGGCCAACATATTCCTCAGAACACTGGATCTGTCTTACAACGGCCTGGGTAAGGATGGAGCCGTAGCTTTAGGAGAGGCTCTCAAAGACAACAACACTCTAGAGGACCTCAATATAAGTAACAATCGAATACCCCCTGAAGGTGCGATCCGCTTCACCATGGGCCTCAAAGTAAACAAGACAATAAAAAAACTCAATATGGGGAGGAATCCTATACAGACTGCCGGGTGTTACGGAGTCCTGAAAGCAATCCAGGGAAACGCAGAATCAGCAATGGAGTGCCTGGACTTTTCTGACATAACAGTGAATCAGGACTTTGAGGATTTGTACGTTGCCTTAAAAGACATATTCCCAAACATCAGAGTCAAACATGGAGGAAGAATCAACACATTCAGAAAACCAAAGGCCTAATGGCCTGGTTTGAACCATCAAGAGGAAATACTTTCTTCAAGACAGCAAAGCATCTGGAATATCAGATGTTTATGAATTCTAGGTGAATTGAATGCACAATGCATTGACAACCTTTCTCACCTACAGCACCAAGACAACTTGTCAATTGTATTGAAGAACTACAGTACTTGTACTTTTACATCTTAGCTTGTGGAAATGGGTATTGCATTTTTGGAAACATCATGATCTGTATAAATGATATATTGCTTTCACATCCTATCTGTACTGTGTACATTTCTATATGGTCTGTGTTGGAAAATGTGTACAGATAATAGGGCCTACCCATCAGACCATCACACTCATATtttcaacctggactcaggggtagacgttaTATAGTAAACAAAATCCTGGGCACTCCAATTAGGGTGTGAATGTTATTTGCAATTAGATAGAGAAAATCGGACCTCTCTGAGATGAAAATGGATGGCCATCCCCTCAGCGAAGTTTATTTGACCTAAACCCTCCCTAGACGTTTGAAAAATAACAAgtgacccccccctccccctatacTCAAAAGAATAATGAAAACCTAAAGTGGATAGCAAAGAACATCCTTacctcacttcttggacagaccagagccttatgccattttagaaactgttcttagtcctgtaagcattacatggcaacACATGGCTTGGGGTCCAGAAGATTGTGGGTTCACAGACCACTATGGACCACAGTAGGGGTGGGAAAAGTTTTGAATTGATCTATCATTGTATTTCCAGGTCTGAGAGAAAAAAAAGCCTTTTGTAAAAATGTCATGCAATTCTGCATAattttacatactgtatttacaaaatattttttaataccacacaaattactgaaattacaggctaagaatggacagagagataggcctatctatgtgttcatcttatcatattcctccaatgccaaatcagtgtgtcttATTTGCAACGAAACTCTCCCTGTTTGcaaataatgaaatcagaaatgTCGTAAGGAATCTGAGCATGGTAGTTTCAAAAGttaggtctacctttccaccccagacagtaggcctacctttccaccccagacagtaggcctacctttccaccccagacagtaggcctgcctttccaccccagacagtaggccGACCGACACAGACAAATGTAAGttttaactgctggctactcttcttccTTGGCTTAACCCAACAGAGGTAACAAGTGTTTTCTAAAAGCTGTCTGAGGTTAAACATCTTCTATTGTACAGAATGTAaatagcttaatcaattgatagtgacagaattagattacttcccaagcaacCATGTTCTGTCTCCTCGGCTATAAAAGATTGTAGCTcagtctctgaatgtcaaagaaatTAAACAATGATATCCCCCATATGCATTCATGTCTTTCCAGtgtattttacagcttgtttctaaCATAAAGCATTGCGGACCAAAGTGCTGTTATTGATCACTTTATAACATTTTTGCAAAATCTTAAACTAACAATGTGCCTGTGCTTTTTGCATTTTCTTTAATAAAAGGTAGGCCTATGGCATACCCTCTCATACCCCGTCAATTTGAGTCCTGGTTTTAACTTAACAGCCCGTCACTGACATGGAATTTAGGCTATTTGAAGAGTGCATGGAGGGTGGAGGAATTGGCCAACAAATCTACGTATGTCAAAAAGAAAGGAAGACCAAGGCTCTCTCTTCATACAgttaattaaaatgtatttgtatggcatgttcaatggaaacaaagaTTAAAAACTCAGATGCATTTT
>TU580724
AAGTTTTGAATTGATCTATCATTGTATTTCCAGGTCTGAGAGAAAAAAAAGCCTTTTGTAAAAATGTCATGCAATTCTGCATAattttacatactgtatttacaaaatattttttaataccacacaaattactgaaattacaggctaagaatggacagagagataggcctatctatgtgttcatcttatcatattcctccaatgccaaatcagtgtgtcttATTTGCAACGAAACTCTCCCTGTTTGcaaataatgaaatcagaaatgTCGTAAGGAATCTGAGCATGGTAGTTTCAAAAGttaggtctacctttccaccccagacagtaggcctacctttccaccccagacagtaggcctgcctttccaccccagacagtaggccGACCGACACAGACAAATGTAAGttttaactgctggctactcttcttccTTGGCTTAACCCAACAGAGGTAACAAGTGTTTTCTAAAAGCTGTCTGAGGTTAAACATCTTCTATTGTACAGAATGTAaatagcttaatcaattgatagtgacagaattagattacttcccaagcaacCATGTTCTGTCTCCTCGGCTATAAAAGATTGTAGCTcagtctctgaatgtcaaagaaatTAAACAATGATATCCCCCATATGCATTCATGTCTTTCCAGtgtattttacagcttgtttctaaCATAAAGCATTGCGGACCAAAGTGCTGTTATTGATCACTTTATAACATTTTTGCAAAATCTTAAACTAACAATGTGCCTGTGCTTTTTGCATTTTCTTTAATAAAAGGTAGGCCTATGGCATACCCTCTCATACCCC
>TU580726
GGCCAACATATTCCTCAGAACACTGGATCTGTCTTACAACGGCCTGGGTAAGGATGGAGCCGTAGCTTTAGGAGAGGCTCTCAAAGACAACAACACTCTAGAGGACCTCAATATAAGTAACAATCGAATACCCCCTGAAGGTGCGATCCGCTTCACCATGGGCCTCAAAGTAAACAAGACAATAAAAAAACTCAATGTAAGTCAGAAAAAAAGAGATTGGCTGTAGTATGGAAAGCATTGGGGGATATGCGTGAG

Function

symbol description
lrrc74b Orthologous to human LRRC74B (leucine rich repeat containing 74B).

NR:

description
leucine-rich repeat-containing protein 74B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606593.2 False 3315 mRNA 0.45 11 44411696 44435774
TU580724 False 821 lncRNA 0.37 2 44411908 44412754
TU580726 True 255 lncRNA 0.45 2 44414221 44414769

Neighbor

gene id symbol gene type direction distance location
LOC110526901 NA coding downstream 1749 44402811 ~ 44409947 (-)
LOC110526015 gatsl3 coding downstream 17677 44365856 ~ 44394019 (-)
fbxw8 fbxw8 coding downstream 66247 44309894 ~ 44345449 (-)
nf2a nf2 coding downstream 139310 44209338 ~ 44272386 (-)
LOC110526006 LOC106584969 coding downstream 312565 44045046 ~ 44099131 (-)
nos1 LOC106585241 coding upstream 518 44436292 ~ 44501179 (-)
LOC110526017 LOC106585243 coding upstream 100235 44536009 ~ 44592618 (-)
LOC118965027 LOC106585243 coding upstream 208073 44643847 ~ 44717089 (-)
LOC110526019 cirbp coding upstream 281742 44717516 ~ 44718429 (-)
wsb2 wsb2 coding upstream 305165 44740939 ~ 44748610 (-)
G511379 NA non-coding downstream 56444 44354935 ~ 44355252 (-)
G511376 NA non-coding downstream 59706 44350427 ~ 44351990 (-)
G511375 NA non-coding downstream 61533 44349657 ~ 44350163 (-)
G511345 NA non-coding downstream 127116 44284274 ~ 44284580 (-)
G511885 NA non-coding upstream 88129 44523903 ~ 44550277 (-)
G511957 NA non-coding upstream 206625 44642399 ~ 44642599 (-)
G511958 NA non-coding upstream 207511 44643285 ~ 44643534 (-)
G511967 NA non-coding upstream 223119 44658893 ~ 44659487 (-)
prodhb LOC100194675 other downstream 463307 43940790 ~ 43955257 (-)
G510310 NA other downstream 887588 43523714 ~ 43524108 (-)
G509952 NA other downstream 1286309 43124581 ~ 43125387 (-)
G509949 LOC106578716 other downstream 1288604 43122546 ~ 43123092 (-)
znrf3 LOC106584905 other upstream 838864 45270568 ~ 45384850 (-)
apba1a apba1 other upstream 1924114 46263121 ~ 46360886 (-)
LOC110526044 LOC107699739 other upstream 1934916 46367701 ~ 46430607 (-)
G514434 NA other upstream 2474884 46910658 ~ 46910950 (-)
G514777 NA other upstream 2580388 47016162 ~ 47016496 (-)

Expression


Co-expression Network