LOC118965027 (LOC106585243)


Basic Information

Item Value
gene id LOC118965027
gene name LOC106585243
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 44643847 ~ 44717089 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981751.1
CATTGTACACGGTTGACTTAAATTGTGGCCCCCCTGCCAGTTTCCCCTAGGCAAAGGCAAAATTGGGTATATCGTGACCATGAATGCAAACAAAGTATGTTGGTGCGGTTAAGTTTCAAAACTATTTGTATGAGATATTGTGGACCACAATGTGTACTGCCATATGGATTGTACAGACAGGTATGCTAATCAACCATTTGGGAATAAATTTGACTGACTGAAATACATGCAAATGTAGCCTAGTAGTACTTAGATGTGCTCTTATCAAAAAGTGATTGACAATCTTTTAATCTGGCAGTTGAATCAAAGTATTTAATTCAAGAGACAAAATAGGGTGCTTAAATCATTAACCCAAATAATCTTGTTTTGTTGGAGGCTCAGACAGCCTACAATAAACTATTTTGATTGCCTGTTTGTGCTTGATGAGCTGTATTTCtgatcacatactgtacattaggcACAACACAGACATTCTAGAATTCACTAGAAACTGGGCAACAATGTAGTGTAGCCTTGGAAGCCAAGTATCACTTTTTAATTGTGTGATGAGGGATTTCCAGCAGGCAGCACAACACACAGCACCATGCCTGTTCAGTCCAGCAGTGAGACACaatgctgtctgtctctgcaggTGATGGAGGAAATGTCATAATCACTGGTTCCCCACTACCTGCCTCATTCAAGATGACACTCACTTGTAATGCTCTATATCGCCCCCCTGTTTATTTCCCCCCACCCACAGAAGAGAAAGAGCTGTCATAAAGTATAATTCAGTAAGAGATGTTGGCCTGGCCTACTCAGGCTCACTCAGAGTTCTGTGATTTAATTTGGACAGACAGGCAATAACTGTTGCAGTTCATTTGGAGTATACAAGTGTAACATAAAATGTatggttattgtgtgtgtgtgcagtggagggtaaacacaagTACTTTTTTTGCACAACAGCTTGCTCACCTTttgttaaaaaaatgtattgaaagtATAAAGTTTTTCACTGCAAGCAGTGATCAGTTATTTTTTACTaacacatctgtgtgtgtgtgtgtgtgtggattgacCAAGATACAAGTAGCCTTAAAAGGGCAGATGTAGAAAAGCCTAGTTAAAAAAATTATCCCAATTTGGTTTGGTgaaaaatgacaatacattacaattaTAATGTGGAGCTGATGATGGAAACTACCTACTGGTATGAAGTTAAAACTGAGTCCACGCTCACTGCACGGATATAATCTCGCGATAACTCCTCCTACTACATGCAGCATCACTCGTTGATGGTGCCTCAAACGGTGCCCCCCCTTCTCCCGCAGCTTCCATGGGCAATGCTGTTGCTGTGGATTTGATTGACGTGAAACATGTCGGTGTGGTGGTGGGAGCGAACCGGGATGCAGCTGCTGGCATGTGTGACGGTAGAACCTGTACCCAATCCACACAGCATCACGTGTAAAATTATTATAAGAAGCTGCTTTAGTGTTATTGATCAGCTATGATTTTTATTTGAAATGAACAAACAGAACGCTGACTGGATTTATTAGATAAGGCTTGATCGGTTGTGTTCTGACTTGTATTTCTGTTGAGGAGGTATAGCCTAGGCTATCTGCATCATGTGTTTGACGATATAGCCCTCAGCATCAGTACCAGGCTCAATCAGAAACACCTTGATGAACCACCACCTGGAATACAAGGACAATTACAATGAAGTCGACTTTCACATAGATCACATCTCGTTTCTAAACCAGTGTATATAATAGATTATAACACCACGTTGGCTGGCGTTTTGCAGGGTACTTTATTACATGGAGCTATTTCCACCTTTTTGTCCCCGAGTAGAGTATTTTTTGTTGAAGTACACATAAAAACGACCACTGCTCGCAAACTATGGACGAGGAGAATATGACAAAAAGCGACGAGCAGCATTTGAGTTTGCAAAAAGCTTTGCAGCAGTGCGAGTTGGTTCAAAATATGATAGACATAAGCATTTCCAGCTTGGAGGGTTTGAGGACCAAATGTGCCACATCCAACGACTTGACACAAAAAGAAATACGAACGCTAGAGGGAAAGCTGGTGAAGTACTTCAGTCGCCAGCTGTCCTGTAAGGTGAGAGTGGCCTCACAGGAGGACAGCACTGAGCTACAGGACTTCCCCAGACTGGGACACTGGTTCCGCATCGTCAACCTGAGGAAGGAGGTCACTGAGgagATGGATCCGGGCGACGTGACTCTGGAGGGGCTGCTGGAGATGAGTGATGAGCAGGTGTGTGAGGCCATGGAGAAGTTTGGAGCCAACGACGAGGAGTGTGCTCGGCTCAACGCCTCTCTGTCCTGCCTCAGGAAGGCCCACCAGTCCGAACAACTCGAGGATGACTCATTGCCCAATAACGGAGcaGGCAGCCATGCCAAGCAGGACTGGTCCATCCAGTGGCCCACCTCTGAGTCTGGCAAGGAGAacactcccttcccctctccagaACCCAGCCAGTGGGTCCGCTTCCAGCTCTCCCAAAGCCCCATGGTCCAGGCCAAGTACAACCAGCAGCACCACAGCCAGTGCCACAGCCCCCAGTCATTGCTACCCTATCCGTATGGCCCCTATGTCCAGCCAGACCGCCTCACCGTGGACAGCCACCTGGGACTGGGGGCCTTCCCCCCCATGGACACGGGTCATCGATCCCTGCCCCCCTCGCCCCGTCAGAGGCACTTTGCCCACACCCCTCCCCGGACTCCACTGGTGGTGAACACCATGACCCCCCCGGGCACGCCCCCCATGAGGCGCAGAAACAAGGTGAAGGCCCCCGGGACGCCCCCACCGCCCAGCCGAAAGCTCATCCACCTGCTGCCGGGCTTCACGGCGCTACACCGCTCCAAGTCACACGAGTTCCAGCAGGGCAACCGCATAGTTCTGGAGGCAGCTGACATGCAGACACTCAAagtgaAGCAGAAGAAGTCCAAGCCTCAGCACCTGAAGATCAACAGCAGTGTGGGGAGCTGTGAGAACCTCCCTACCCAACGctcacccctccactcctctgacCATCGCTCACTCCGTTCCTTCTTCTTCCCCACCTTCATCCCCTCCACTCCCCCCGTCCACTCCGATGCAAacGAAGACTAA

Function

NR:

description
kinase suppressor of Ras 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981751.1 True 3114 mRNA 0.48 7 44643847 44717089

Neighbor

gene id symbol gene type direction distance location
LOC110526017 LOC106585243 coding downstream 51229 44536009 ~ 44592618 (-)
nos1 LOC106585241 coding downstream 142668 44436292 ~ 44501179 (-)
lrrc74b lrrc74b coding downstream 208073 44411696 ~ 44435774 (-)
LOC110526901 NA coding downstream 233900 44402811 ~ 44409947 (-)
LOC110526015 gatsl3 coding downstream 249828 44365856 ~ 44394019 (-)
LOC110526019 cirbp coding upstream 427 44717516 ~ 44718429 (-)
wsb2 wsb2 coding upstream 23850 44740939 ~ 44748610 (-)
LOC110526021 vsig10 coding upstream 32512 44749601 ~ 44756143 (-)
taok3a taok3 coding upstream 45802 44762891 ~ 44855594 (-)
LOC110526026 LOC106584908 coding upstream 462151 45179240 ~ 45185652 (-)
G511958 NA non-coding downstream 313 44643285 ~ 44643534 (-)
G511957 NA non-coding downstream 1248 44642399 ~ 44642599 (-)
G511885 NA non-coding downstream 93570 44523903 ~ 44550277 (-)
G512008 NA non-coding upstream 10733 44727822 ~ 44728825 (-)
G512009 NA non-coding upstream 11804 44728893 ~ 44729483 (-)
G512084 NA non-coding upstream 159536 44876625 ~ 44878344 (-)
G512599 NA non-coding upstream 434195 45151284 ~ 45152892 (-)
G512650 NA non-coding upstream 500151 45217240 ~ 45217441 (-)
nf2a nf2 other downstream 432024 44209338 ~ 44272386 (-)
prodhb LOC100194675 other downstream 695458 43940790 ~ 43955257 (-)
G510310 NA other downstream 1119739 43523714 ~ 43524108 (-)
G509952 NA other downstream 1518460 43124581 ~ 43125387 (-)
G509949 LOC106578716 other downstream 1520755 43122546 ~ 43123092 (-)
znrf3 LOC106584905 other upstream 557549 45270568 ~ 45384850 (-)
apba1a apba1 other upstream 1642799 46263121 ~ 46360886 (-)
LOC110526044 LOC107699739 other upstream 1653601 46367701 ~ 46430607 (-)
G514434 NA other upstream 2193569 46910658 ~ 46910950 (-)
G514777 NA other upstream 2299073 47016162 ~ 47016496 (-)

Expression


Co-expression Network