wsb2 (wsb2)


Basic Information

Item Value
gene id wsb2
gene name wsb2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 44740939 ~ 44748610 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606595.2
GTAGCCAATCATATCGCATTGGAGGGATGGAATTTTACTGTACAGGAAATCAGATGAATTCTTCTTTGACTTACATTTCTCTACCGAAATCTTAAAAAAACACTATTTGGCTATATCACGTCATTTAGCGTTCCGAATATACAGTATGCGCTCTATTTTTCTCTCGGAATATGGCATTTTAACATGGGATTATTGACTAGACGTCATTGTTAGATAATCAGGAAGTATAGACAGTAACCCGATCAAGAATGTGATAACCTGCTTCCGTCAACATctaaaatttgcaaaaatgtgttCATTGAAAGACAACATTCGGCGCATACGGCCAGCTTCCGATGGGCTGATATTGGAATTGAAATCCGCCCACCCTCCATCGCTGGAGGGGCGCGCTGGCTGCGAGACGTGGAGCGTTGATTTCTCTCCAGATGGATCCTGGTTTGCATGGTCCATGGGACACGGGATTGTGTGGGTGATTGCCTGGCCGCTTCGGCATGATAAGGTCAATAGGGTTGAGATTGCCCTAGAGAGCAACAGACAGGACAAGACCCTGAACTGTGGTCAGACAGTGTGGGGGCTGGCGTTTGGACCACGTCCATCAAAGACACCAGCACCTGGAGAAAAAGCAGCATCCCGTGAGAGAGAATCATCCAGACTGCTTCTGGCAACTGGCTTAGAGAATGGAGTGATCAAGATATGGGATGTTGAAACTGGTCAGCCTCGGTTTGACCTCAAAGGACATGAGGGTATTGCAAGGGACCTGGTCTTCACTCCCAATGAAAAGCTCACCCTTGTATCATCCTCTCGAGACAAAACCTTAAGGATATGGGATCTAACCCAGAAAGGTGAAAAGGAGCCACATGTCTTCTCTGGCCACAAGGACTGGGTCAGCTGCTGTAGTGTCTCACCAGACTGCAGCATGATCGCATCGGTCGGCAGGTTTGACAGAatgGTGTGTCTATGGAGCCTGCGGTCATACACTTTCATCAGGAACTTAACGGGGATCAACCACAAGACATTCTACCTGTTAGCTTCCTGTGACTTCTCTCCCGATGGGGCACTGCTTGCCACTGCAGCCTTCAGTGGTTCCCGTTGGTGGATCGATCTGTGGGATCCCTACACTGCACAGAAATTGTCTTCTCTAATGGATTGCTCTGAGATGTATGGACAGAACCAAATCTCATCATTGAGATTCTCCCCCGAGGGTTTGCAACTGGCCATTGTTACTGAAGACAGAGCCCTCCAGATGTGGGAGCCAGGACAGAGGGGTATGGTGATGCAGACCAAGGAGGACCGTACCTCCAATGGGCTGTGCTGCAACTTCCATCCACAAGGGGGAGTCGTAGCCACAGGGACCAGAGATGGCCACGTGAGGTTTTGGATGGTTCCCAGGTCAGTGCCCAGTCTGTGCCACCTGTGCCGCTCCGTCCTGCGCCACTCAGTCTCCACACACCAGGTGGAGGCCCTCCCCATACCACGCAGGATCCTGGAGTTCCTCACCTACAGAGACATCCCGGACCACTCAGAAGCACGATCTGACCGCTCCTCGGATGAGGAGGAATAGTGACTTTTGGAATGGGTGGAGGGAATGTTTCTGGACTCCATTTGTAATGCATTTGAGTTGATGGATGCATTGACTGGCTAATGATGGAACAGTCAAAGGAGGAGAGCTTATTATTTGCCTCGTTTACAAATGCATAAAGAGTTGGTGGGAATGTTGTCAGACTGAAATGATGGGActttttaggaccttgagtggaGTGGATACTTTGTGGTTTACACAAAATCAGTCATGTCTGATCAGCTATTTGTCCAAGGAAATCTCTCAGGATGTCAAAATGGAAATTCACCTGGATGCAATTAGCTAGTGATTATACAGATGAACTTAACAAATTTACATAAATTGCACCAAAAAAATGGAAGTTACTAGATCTATATTTTGTGCTACGGATATATTATAGTATGTAAAGTGACATTTGTGTAATTTTGCTGAGAGTAAATATACATTTTGTAGTGTAAATTGGTCTATTAAATCATAATTCCATGACAGTCTAAAAAAATACACTAATTACAATTTTATTAAACACAAATTAAACTTAATGGACATAAAGGAATATTGAGCAAACGGGGACAACACAAGTGTGTCTTTATGACGTTAGTCTCAAGAGTTCTCTCCCCTGTCGCTTTCGTTGATAAATGTTATATTTTAGTGAACAGGGTACGCAGGCCTTTTGTCCCAGCtcaacactaacacacctgactcaagTAACCATGGTCTCGAACAGCAATGTATTAATTGTATCAGGTGTGTTAAAGATGGGCTGGAACAAAATCATGCGTAGCTCTCCAAGAACTTGGTAGGTGACCAATGTGTACTAGATCAGGGGTTCCTAAACTTTTTCACTCAGGCCCCCCTTCCAGCAATGGGGAACATCCGCCCCCTCCCGCGTTTCCGCCACGACTAGTTCtgtgggcacaagcactgttcatgacacaaactgttcacacccctcttgttggagAGAACATGTGGCAAGTTTAAAGCTTTTTTTCCTGCAATTCAAACTTTTTGTGAAGGGGtgcagagaaaatgttgctgttttcaaTGATTTTCTTGGAATTCAATAAAAtgttgccatgtc

Function

symbol description
wsb2 Predicted to be involved in protein ubiquitination. Predicted to act upstream of or within intracellular signal transduction. Orthologous to human WSB2 (WD repeat and SOCS box containing 2).

NR:

description
WD repeat and SOCS box-containing protein 2-like

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0016567 protein ubiquitination biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606595.2 True 2639 mRNA 0.46 9 44740939 44748610

Neighbor

gene id symbol gene type direction distance location
LOC110526019 cirbp coding downstream 22510 44717516 ~ 44718429 (-)
LOC118965027 LOC106585243 coding downstream 23850 44643847 ~ 44717089 (-)
LOC110526017 LOC106585243 coding downstream 148321 44536009 ~ 44592618 (-)
nos1 LOC106585241 coding downstream 239760 44436292 ~ 44501179 (-)
lrrc74b lrrc74b coding downstream 305165 44411696 ~ 44435774 (-)
LOC110526021 vsig10 coding upstream 991 44749601 ~ 44756143 (-)
taok3a taok3 coding upstream 14281 44762891 ~ 44855594 (-)
LOC110526026 LOC106584908 coding upstream 430630 45179240 ~ 45185652 (-)
trnaw-cca NA coding upstream 479797 45228407 ~ 45228478 (-)
xbp1 xbp1 coding upstream 503276 45251886 ~ 45254834 (-)
G512009 NA non-coding downstream 11456 44728893 ~ 44729483 (-)
G512008 NA non-coding downstream 12114 44727822 ~ 44728825 (-)
G511967 NA non-coding downstream 81452 44658893 ~ 44659487 (-)
G511958 NA non-coding downstream 97405 44643285 ~ 44643534 (-)
G511957 NA non-coding downstream 98340 44642399 ~ 44642599 (-)
G512084 NA non-coding upstream 128015 44876625 ~ 44878344 (-)
G512599 NA non-coding upstream 402674 45151284 ~ 45152892 (-)
G512650 NA non-coding upstream 468630 45217240 ~ 45217441 (-)
G512655 NA non-coding upstream 474267 45222877 ~ 45223103 (-)
G512657 NA non-coding upstream 476944 45225554 ~ 45226243 (-)
nf2a nf2 other downstream 529116 44209338 ~ 44272386 (-)
prodhb LOC100194675 other downstream 792550 43940790 ~ 43955257 (-)
G510310 NA other downstream 1216831 43523714 ~ 43524108 (-)
G509952 NA other downstream 1615552 43124581 ~ 43125387 (-)
G509949 LOC106578716 other downstream 1617847 43122546 ~ 43123092 (-)
znrf3 LOC106584905 other upstream 526028 45270568 ~ 45384850 (-)
apba1a apba1 other upstream 1611278 46263121 ~ 46360886 (-)
LOC110526044 LOC107699739 other upstream 1622080 46367701 ~ 46430607 (-)
G514434 NA other upstream 2162048 46910658 ~ 46910950 (-)
G514777 NA other upstream 2267552 47016162 ~ 47016496 (-)

Expression


Co-expression Network