LOC118965028


Basic Information

Item Value
gene id LOC118965028
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45765669 ~ 45774928 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118965028
ATGGGTTATTACGATGATGATCTGATGAAGAAGCAGCTGGGAGCGACAGAGAGGCAGATCAGGGGGGAGCTTGAGAAGCTTCACCAGTtcctcagagaggaagaggaggccagACTGACTGcacggagggaggaagagaaggagaagggtaaGATGATCACCAGAGAGAAAGAACATTCAGGACCAGATCACCTCTCTTACAGAAATCATCCCTGCTGTGAAACAGAACCTGCGGAAACAGAATGTGTCATTTCTCAAGAGCTACAAACACACCCAGACAAGCTCCAGAGCCCAGTTCACACTGCCAGATCCACAGCTGGTCTCAGGAGCACTGGTAGATGTGGTAAAACACCTGGGAAATCTGCAGTTCATAGTCTGGAAGAAGATACAAAGGATTGTCAAGTACACTCCTGTGATTCTGGACTCCAATACTGCTGAATGTAGGCTCTCTCCGTCTGATGATCTGACCACTGTGAGACATTTAGAAAAAAGGCAGCAGCTCCCTGACAACCCAGAGAGGAACAAAATTTACGGCAATGTTCTGGGCTCTGAAGGGTTTAGGTCAAGAAAAGACAGCTGGGAGCTGGAGGTAGGGGACCACTCTCACTGGTATATAGGTGTGGCCAAGGAGTCAATCAACAGGAAGAAGGAAATATTTGCAACCACGGTGTATAGATACTAATCCATATATTTGAGGAGAGGTAAATATTGTGCAGGAGATAAGTCTCACACTAAAGAGGAGACTCCAGAGGACCAGTGTGCAGCTGGACTATGACAAGAGGGAGGTGTCTTTCTACGACCTGAAAGACATGACACACATCTACAAATACAAAGACACGTTTACTGAGAGAATGTACCCATACCTCTCTAATGGAAAGCTTGGTGATGCTGACCATCCTGATATACATATCTGCCAATCAGAGGTCTCTCTGACAGTGATGTAG

Function

NR:

description
zinc-binding protein A33-like

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118965028 True 944 mRNA 0.47 2 45765669 45774928
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110526035 LOC105889509 coding downstream 22574 45655985 ~ 45743095 (-)
kremen1 kremen1 coding downstream 212295 45437334 ~ 45553374 (-)
coq5 coq5 coding downstream 346825 45414975 ~ 45418844 (-)
znrf3 LOC106584905 coding downstream 380819 45270568 ~ 45384850 (-)
xbp1 xbp1 coding downstream 510835 45251886 ~ 45254834 (-)
LOC110526037 LOC106584895 coding upstream 76302 45851230 ~ 45863241 (-)
LOC100136024 LOC100136024 coding upstream 129123 45904051 ~ 45907159 (-)
LOC110526038 LOC106584879 coding upstream 140844 45915772 ~ 45954751 (-)
LOC110526039 NA coding upstream 198845 45973773 ~ 45995386 (-)
apba1a apba1 coding upstream 488193 46263121 ~ 46360886 (-)
G513123 NA non-coding downstream 12774 45752667 ~ 45752895 (-)
G513122 NA non-coding downstream 13297 45751909 ~ 45752372 (-)
G513114 NA non-coding downstream 20265 45745202 ~ 45745404 (-)
G512925 NA non-coding downstream 116608 45648684 ~ 45649061 (-)
G513159 NA non-coding upstream 20874 45795802 ~ 45796144 (-)
G513161 NA non-coding upstream 22250 45797178 ~ 45797412 (-)
G513163 NA non-coding upstream 24532 45799460 ~ 45799729 (-)
G513169 NA non-coding upstream 30806 45805734 ~ 45805966 (-)
G513773 NA non-coding upstream 173114 45948042 ~ 45979860 (-)
nf2a nf2 other downstream 1553846 44209338 ~ 44272386 (-)
prodhb LOC100194675 other downstream 1817280 43940790 ~ 43955257 (-)
G510310 NA other downstream 2241561 43523714 ~ 43524108 (-)
G509952 NA other downstream 2640282 43124581 ~ 43125387 (-)
LOC110526044 LOC107699739 other upstream 595762 46367701 ~ 46430607 (-)
G514434 NA other upstream 1135730 46910658 ~ 46910950 (-)
G514777 NA other upstream 1241234 47016162 ~ 47016496 (-)
G515094 LOC106585477 other upstream 2199865 47974793 ~ 47976975 (-)

Expression

LOC118965028 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.8.
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LOC118965028 Expression in each Bioproject

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LOC118965028 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 3.
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Co-expression Network