Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110526037 |
| gene name | LOC106584895 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 45851230 ~ 45863241 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0006334 | nucleosome assembly | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0000786 | nucleosome | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| id | description |
|---|---|
| K11251 | H2A; histone H2A |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021606628.2 | True | 1950 | mRNA | 0.40 | 5 | 45851230 | 45863241 |
45,848,000
45,850,000
45,852,000
45,854,000
45,856,000
45,858,000
45,860,000
45,862,000
45,864,000
45,866,000
45,868,000
45,870,000
45,872,000
45,874,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965028 | NA | coding | downstream | 76302 | 45765669 ~ 45774928 (-) |
| LOC110526035 | LOC105889509 | coding | downstream | 108135 | 45655985 ~ 45743095 (-) |
| kremen1 | kremen1 | coding | downstream | 297856 | 45437334 ~ 45553374 (-) |
| coq5 | coq5 | coding | downstream | 432386 | 45414975 ~ 45418844 (-) |
| znrf3 | LOC106584905 | coding | downstream | 466380 | 45270568 ~ 45384850 (-) |
| LOC100136024 | LOC100136024 | coding | upstream | 40810 | 45904051 ~ 45907159 (-) |
| LOC110526038 | LOC106584879 | coding | upstream | 52531 | 45915772 ~ 45954751 (-) |
| LOC110526039 | NA | coding | upstream | 110532 | 45973773 ~ 45995386 (-) |
| apba1a | apba1 | coding | upstream | 399880 | 46263121 ~ 46360886 (-) |
| LOC110526044 | LOC107699739 | coding | upstream | 504460 | 46367701 ~ 46430607 (-) |
| G513169 | NA | non-coding | downstream | 45264 | 45805734 ~ 45805966 (-) |
| G513163 | NA | non-coding | downstream | 51501 | 45799460 ~ 45799729 (-) |
| G513161 | NA | non-coding | downstream | 53818 | 45797178 ~ 45797412 (-) |
| G513159 | NA | non-coding | downstream | 55086 | 45795802 ~ 45796144 (-) |
| G513123 | NA | non-coding | downstream | 98335 | 45752667 ~ 45752895 (-) |
| G513773 | NA | non-coding | upstream | 84801 | 45948042 ~ 45979860 (-) |
| G513925 | NA | non-coding | upstream | 274917 | 46138158 ~ 46140055 (-) |
| G513940 | NA | non-coding | upstream | 303349 | 46166590 ~ 46166796 (-) |
| G513941 | NA | non-coding | upstream | 304541 | 46167782 ~ 46167986 (-) |
| G513942 | NA | non-coding | upstream | 305549 | 46168790 ~ 46169001 (-) |
| nf2a | nf2 | other | downstream | 1639407 | 44209338 ~ 44272386 (-) |
| prodhb | LOC100194675 | other | downstream | 1902841 | 43940790 ~ 43955257 (-) |
| G510310 | NA | other | downstream | 2327122 | 43523714 ~ 43524108 (-) |
| G509952 | NA | other | downstream | 2725843 | 43124581 ~ 43125387 (-) |
| G514434 | NA | other | upstream | 1047417 | 46910658 ~ 46910950 (-) |
| G514777 | NA | other | upstream | 1152921 | 47016162 ~ 47016496 (-) |
| G515094 | LOC106585477 | other | upstream | 2111552 | 47974793 ~ 47976975 (-) |
