LOC110525032


Basic Information

Item Value
gene id LOC110525032
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45958430 ~ 45959299 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002473699.2
ctgttctgaggccaAAAGGAGGAGCAactgaatattaggaagTGTGGACCATCTACGCCCTAGCTGCACTCCTGACTCTGACAGTCATAGCCATGGTGGCTAAACTACTACTGCATATTACAGTGAAAAGTgatgtaacatggagatatggccgtgtgggaacacaAACCCTAACCAGCCTGGTCACCTGTGAGCTGCAAGTCAATATTCAACGTCCATCCATTTCTGATGTCAGGAGATGATGTAAAAACCGTCCACTAGGGGTAAATGAGCGTTGTTATCTTCAAGAAGTTTTCAGTTTTGCTCGAGCGTTCTGAACAGGGATGGCGGATGGCGTAAGCgactgcctctgattccaaaggttgtaaattcaaatccagcgatagaaagttgtttttgagaatAAAAAAATTAagcctaacccaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002473699.2 True 427 mRNA 0.44 3 45958430 45959299

Neighbor

gene id symbol gene type direction distance location
LOC118964875 NA coding upstream 57310 45899919 ~ 45901120 (+)
LOC110526902 NA coding upstream 84721 45872819 ~ 45873709 (+)
LOC110526036 LOC106584896 coding upstream 120691 45813398 ~ 45837739 (+)
si:dkey-174n20.1 LOC106584900 coding upstream 304363 45647734 ~ 45654067 (+)
LOC110526028 ccdc60 coding upstream 721486 45187119 ~ 45236944 (+)
LOC110526904 NA coding downstream 9165 45968464 ~ 45972013 (+)
LOC110526042 LOC106584891 coding downstream 116785 46076084 ~ 46190292 (+)
LOC110526905 LOC106584888 coding downstream 240220 46199519 ~ 46263098 (+)
ascc2 ascc2 coding downstream 486657 46445956 ~ 46461957 (+)
LOC110526048 sec14l2 coding downstream 512185 46471484 ~ 46514756 (+)
G513043 LOC100136024 non-coding upstream 51867 45904093 ~ 45906563 (+)
G513033 NA non-coding upstream 95247 45851233 ~ 45863183 (+)
G513030 NA non-coding upstream 150191 45808015 ~ 45808239 (+)
G513024 NA non-coding upstream 160622 45797501 ~ 45797808 (+)
G513021 NA non-coding upstream 164645 45790666 ~ 45793785 (+)
G513363 NA non-coding downstream 173899 46133198 ~ 46141623 (+)
G513377 NA non-coding downstream 234129 46193428 ~ 46193656 (+)
G513379 NA non-coding downstream 235939 46195238 ~ 46195439 (+)
G513380 NA non-coding downstream 236477 46195776 ~ 46196008 (+)
G512912 NA other upstream 322180 45635589 ~ 45636250 (+)
G512192 LOC106584908 other upstream 772561 45184439 ~ 45185869 (+)
G510416 NA other upstream 2299937 43657468 ~ 43658493 (+)
G509160 NA other upstream 3388261 42567105 ~ 42570169 (+)
G513501 NA other downstream 400657 46359956 ~ 46360585 (+)
G513745 NA other downstream 941262 46900561 ~ 46901123 (+)
G514464 NA other downstream 967543 46926842 ~ 46927714 (+)
G514499 NA other downstream 1062995 47022294 ~ 47023092 (+)

Expression


Co-expression Network