LOC118964903


Basic Information

Item Value
gene id LOC118964903
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 49302665 ~ 49303356 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052148.1
ccatcctgttagaaggtaacagattattttattacaatggtTCAATTGGATTTTCATTGTGTTCAATGGTGTTATTTGCCCCCTAGTGGATGTTTCTGGTACTTAGAAAGACTACGCAAACAGGAAGGAGAGAATTTGTTCTGCACGCATAGAAGCAGCTACAAACAACGCTACGGTGCAGGTCTTTCAATGTAGTTATTTCTTGTCACGCTTCAGccttggaaaatatttgttttttcacaacataaacgttttcaatatattcattcaagaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052148.1 True 276 mRNA 0.36 2 49302665 49303356

Neighbor

gene id symbol gene type direction distance location
LOC110526066 LOC106584148 coding upstream 56165 49233579 ~ 49260632 (+)
LOC118964897 NA coding upstream 112858 49188175 ~ 49189807 (+)
edf1 edf1 coding upstream 115331 49183291 ~ 49187334 (+)
LOC110526069 LOC106586970 coding upstream 146663 49146127 ~ 49156002 (+)
qsox2 qsox2 coding upstream 168360 49076657 ~ 49134305 (+)
LOC118964898 LOC106585477 coding downstream 58674 49347319 ~ 49387212 (+)
LOC118936463 LOC106585477 coding downstream 215236 49518592 ~ 49522715 (+)
LOC118965033 LOC106585477 coding downstream 249673 49553029 ~ 49566639 (+)
cfap77 cfap77 coding downstream 370785 49674141 ~ 49747277 (+)
barhl1a barhl1 coding downstream 445432 49748788 ~ 49753260 (+)
G516006 NA non-coding upstream 12191 49270614 ~ 49290474 (+)
G515986 NA non-coding upstream 69670 49232511 ~ 49232995 (+)
G515985 NA non-coding upstream 72595 49229169 ~ 49230070 (+)
G515897 NA non-coding upstream 140205 49161794 ~ 49162460 (+)
G516038 LOC106585477 non-coding downstream 29684 49333040 ~ 49333982 (+)
G516047 NA non-coding downstream 54405 49357761 ~ 49359016 (+)
G516050 NA non-coding downstream 63463 49366819 ~ 49411934 (+)
G516029 NA non-coding downstream 200176 49503532 ~ 49506083 (+)
LOC110526072 LOC106587002 other upstream 348374 48948617 ~ 49037542 (+)
G515189 LOC100135962 other upstream 714777 48532377 ~ 48587888 (+)
G515069 NA other upstream 1350411 47950006 ~ 47952254 (+)
G516011 NA other downstream 1769 49305125 ~ 49307140 (+)
LOC118964907 NA other downstream 1417045 50719208 ~ 50743120 (+)
LOC110526128 NA other downstream 1608472 50911697 ~ 50922106 (+)

Expression


Co-expression Network