fam160b2 (LOC106587022)


Basic Information

Item Value
gene id fam160b2
gene name LOC106587022
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 50300082 ~ 50312773 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606712.2
ATGCCTCatatttatacatccggtgaaacatCTGGCTAGTTCTATCTGTGGCAATATCGTATTTGGAGCTAGCAAACGGAAAAATGTTTACCATGTTTTGTAAAACGTTTTATTAATTCGACGAAAATAATGGATATGTTCAGTAAACTGACACACCTCTTTCAACAGGCGTTGGAGACCAGGGAGCCGCCAGTAAATTTATTGGACTCTTTTGTGGACCACTGGAAAGGGATAACCAATTATTACATTGAAACTACTGGTCAAACGAGGCCTGTAAAGCAGACAGACATTCCATGGCGATTGAAGCAGATGCTGGATATCTTAGTTTTCGAAGAGGCCCAACAGGGGCAGGAGGAGATGGGCCCTTGTATGGAGTACCTCCTACAGCACAAACTGCTGGAGACCCTCTGCACCCTAGGCAAAGCacagTACCCCCCAGGAATGAACCAGCAGGTCCTGGTGTTCTTCTCCAAGATCCTGGTACAAATCCAAAAGCCAATGCTTCACATCCTCAATGTGTATAGGCCAGTCCAGAAGCTGGTTCGTCTGTGTGGTCTTCCGGGATCGCAGACTGAGAAGGAGGAGGCTCAGTTTATGTTTGTTGTTTGCTCCAGGGTGAAACAAGATCCGTATGTTCTCAACTACATTTTAGAGATTAAAAAGGATAATCACTCCAAGAGGTCTATTTCTACCTCTGAGGATACAGAAAAAGGGAGAAGTGGAGAAACTGTGTCTTCCAATTACCTCACAGCTTCCAACCCTGCCTCCACCTCTAGTCCTCAACAGCACTCACCCACTGACTCTCCCTCAACTATTTTCCCAGCCAATGCAGGCCTCATCCATGTCTTGGTCCACTTGAGCAGAAGCCAGAAAAGCAGAGTTGCACTGAAAGCATTTGAGAGCTTGCTGCTCCTTGTCAGCATACCAAAGGAAGATACTGCTGTGTGCCTGGCTGAAAGCACCCCACTGTGTCAGCTACTAGCTGAGAGGTTGTGTGAGCTCTTCAGCCAGCTCCCGGCTACGCTGGAGCCTGCAGACATCCACAGTTTCCCCCAGACCCACTGGAATAATGGACCTGATGTTTTGTGCAGTGTTGCGTTCTCTCAGAGCGGTAAGCAGGAAAGCCAGTCGTTTCCTGGTAGTGAGCACATGGAGAGCTTTTTCGCTTGGCTGGACTTccttgaccatctgatgagggaGGCACCAAagAGCCTCGCTGTGAAATTAGCCAAAGAAATTCACCATTGCTGGCTTGTCGGTGTTCTACAGCATGAGCTGCTCCAAATGTCTGAGATGGGCGTGCTGGTGAACACTGCGCTGCTGTGCTGCTCGGTGCGTCACATCCAATCCCCTGCCATGGTGGAAGAGCTGGTCTCGTTCCTCCTAGGCAGACAAACACAGAGCGAGCAGCGCTTCGACACAGAGAGTCATGTGCTGCGTTATCAACTTATAGAGCACTGTGACCACATCTCCGATGAGATCAGTATCACTACTCTGCTCCTGTTTGAAGCGCTTCTACAGAAGCCTCACAGGGACATTCTCTTCAACCTGGTCCTGAGGAACCTGGAGAACCGCTGCTACTTGACACGCACTCTGGGGGGAGGGGATGATTGCAGGCATTTCACTGACACTGATCCCGTGGAGGAGAACGAAGAACTAGAGGAGGACCCTTTCTTCACTGACATGTACGGCGAGGATGAATTCAACAGCTCAGAGCAGCTTCTGCATCGACCACAGCTCATCAGAGAACATCGCTGCAGTGGGCAAACTCAAGCATTGGACATtgtaaacagTTTTCTGTGTTTGGTCCCTCAGGAAGCAAAAACCTCTCAACATGTCCAAGGTGCCCGATATGAAACTTATGTCCATGATGCTCATGAGCAGTTTAAAGAGTGCACTGCATTCTCGCTCGATTGGGATTGGCCGGAGTCCCTCAAACCAACCGAGTTGTCTGTATCCAGTTCTGACTTTTTCGAAGGTCACTTCCTCAAAGTCCTGTTTGACAGAATAGGCCGGATCCTTGAGCAGcccTATGAGCTGAACCTCCAGGTGACATCTGTGTTGTCCAGGCTGGCCGTGTTCCCTCACCCCCACCTCCATGAGTACCTGCTGGACCCCTACATCATCCTGGCCCCTGGAGCCCGCTCCCTGTTCTCTGTGCTCATCAGGGTGATAGGAGAACTGATGCAGAGGATCGAGGTGATCCCAAACTTCACAGAGAAGCTTGTGCATGTCCGAAGGCAGCTGATGGGCCTGGATGGGGAGTCTGGAGTGGATCACATGCCCCTGCTTAAGGGAGTGATCATCCTGGAGGAGTTTTGTAAGGAGCTGGCAGCCATTGCCTTTGTCAAACTTCCTGCCAACAACACAAACTTGCAGAACACTGACACCTTGTGAATCCTTGAACGGAACACTCAGTCAGACGGACGACACCAGTCACAGCTGCTTACTTCTGTTGGTTGCACGAGTAAACAAAGCCATAGATGACCGGAGGTACAAGGGCATTTAATTGTTCTCCAAAGATGGAGAATAGCAAATGTGTAAGATTCATCTCCATTTTTAAGTTTATTGTAAATGCTGACATGTTTTGCTTTGAGTTTAGCTTATGTTATATAATGACTATCTTAAGCAAATTATCACACCTGGAAGTAATGTATGCAGTCGGTCAAATCAATGTAAAAGGTTGCGTTCCATCTCGTCTTTGTAACAGTTGCGTATATAAGATTGCTGTAGGCTATCCCTGGTTCCTGAGATATTGAAACATGTATTAGAATGAGGATTGAGCCGGTATTCATAGTGCTTATGTAGGATCATGTTCATTATGGACTAAACTGATCCTGGGTCAGCACTTTTAATGAAGCTTGATACATGATCATCTGGGCTGTGAGACTGGTTGGAACAACCTAAAACTGTGCGTCATCCAGTTTAACTATTGATACTTTCTGTTTGCATGGCGATGAGTCCATCCTGGAGGCAGAACAGAGCGGTTTCCGCTAGATGGGCCAGGTACAAAGTCTAAATAAATTAATaccaaaaagcaaatgttttAATACAAGGTTAGGTTTAAAAGACTTGTACTtcgtggctgtgccagctagcaACCACTCTGGAGTTGCTTCCAGAACAAGATTCACGACAAAAAACACTAACCTGTGCTTGCCTTTTCTCACGTTTTATTTCTGTGTTGAGGTGATGTCTGGTGTCTTATGTGGACCAGGGTCACAACACATCGGTCTTAATACATTGTTTTAAACATCA
>XM_021606713.2
TGCCTCatatttatacatccggtgaaacatCTGGCTAGTTCTATCTGTGGCAATATCGTATTTGGAGCTAGCAAACGGAAAAATGTTTACCATGTTTTGTAAAACGTTTTATTAATTCGACGAAAATAATGGATATGTTCAGTAAACTGACACACCTCTTTCAACAGGCGTTGGAGACCAGGGAGCCGCCAGTAAATTTATTGGACTCTTTTGTGGACCACTGGAAAGGGATAACCAATTATTACATTGAAACTACTGGTCAAACGAGGCCTGTAAAGCAGACAGACATTCCATGGCGATTGAAGCAGATGCTGGATATCTTAGTTTTCGAAGAGGCCCAACAGGGGCAGGAGGAGATGGGCCCTTGTATGGAGTACCTCCTACAGCACAAACTGCTGGAGACCCTCTGCACCCTAGGCAAAGCacagTACCCCCCAGGAATGAACCAGCAGGTCCTGGTGTTCTTCTCCAAGATCCTGGTACAAATCCAAAAGCCAATGCTTCACATCCTCAATGTGTATAGGCCAGTCCAGAAGCTGGTTCGTCTGTGTGGTCTTCCGGGATCGCAGACTGAGAAGGAGGAGGCTCAGTTTATGTTTGTTGTTTGCTCCAGGGTGAAACAAGATCCGTATGTTCTCAACTACATTTTAGAGATTAAAAAGGATAATCACTCCAAGAGGTCTATTTCTACCTCTGAGGATACAGAAAAAGGGAGAAGTGGAGAAACTGTGTCTTCCAATTACCTCACAGCTTCCAACCCTGCCTCCACCTCTAGTCCTCAACAGCACTCACCCACTGACTCTCCCTCAACTATTTTCCCAGCCAATGCAGGCCTCATCCATGTCTTGGTCCACTTGAGCAGAAGCCAGAAAAGCAGAGTTGCACTGAAAGCATTTGAGAGCTTGCTGCTCCTTGTCAGCATACCAAAGGAAGATACTGCTGTGTGCCTGGCTGAAAGCACCCCACTGTGTCAGCTACTAGCTGAGAGGTTGTGTGAGCTCTTCAGCCAGCTCCCGGCTACGCTGGAGCCTGCAGACATCCACAGTTTCCCCCAGACCCACTGGAATGTTGCGTTCTCTCAGAGCGGTAAGCAGGAAAGCCAGTCGTTTCCTGGTAGTGAGCACATGGAGAGCTTTTTCGCTTGGCTGGACTTccttgaccatctgatgagggaGGCACCAAagAGCCTCGCTGTGAAATTAGCCAAAGAAATTCACCATTGCTGGCTTGTCGGTGTTCTACAGCATGAGCTGCTCCAAATGTCTGAGATGGGCGTGCTGGTGAACACTGCGCTGCTGTGCTGCTCGGTGCGTCACATCCAATCCCCTGCCATGGTGGAAGAGCTGGTCTCGTTCCTCCTAGGCAGACAAACACAGAGCGAGCAGCGCTTCGACACAGAGAGTCATGTGCTGCGTTATCAACTTATAGAGCACTGTGACCACATCTCCGATGAGATCAGTATCACTACTCTGCTCCTGTTTGAAGCGCTTCTACAGAAGCCTCACAGGGACATTCTCTTCAACCTGGTCCTGAGGAACCTGGAGAACCGCTGCTACTTGACACGCACTCTGGGGGGAGGGGATGATTGCAGGCATTTCACTGACACTGATCCCGTGGAGGAGAACGAAGAACTAGAGGAGGACCCTTTCTTCACTGACATGTACGGCGAGGATGAATTCAACAGCTCAGAGCAGCTTCTGCATCGACCACAGCTCATCAGAGAACATCGCTGCAGTGGGCAAACTCAAGCATTGGACATtgtaaacagTTTTCTGTGTTTGGTCCCTCAGGAAGCAAAAACCTCTCAACATGTCCAAGGTGCCCGATATGAAACTTATGTCCATGATGCTCATGAGCAGTTTAAAGAGTGCACTGCATTCTCGCTCGATTGGGATTGGCCGGAGTCCCTCAAACCAACCGAGTTGTCTGTATCCAGTTCTGACTTTTTCGAAGGTCACTTCCTCAAAGTCCTGTTTGACAGAATAGGCCGGATCCTTGAGCAGcccTATGAGCTGAACCTCCAGGTGACATCTGTGTTGTCCAGGCTGGCCGTGTTCCCTCACCCCCACCTCCATGAGTACCTGCTGGACCCCTACATCATCCTGGCCCCTGGAGCCCGCTCCCTGTTCTCTGTGCTCATCAGGGTGATAGGAGAACTGATGCAGAGGATCGAGGTGATCCCAAACTTCACAGAGAAGCTTGTGCATGTCCGAAGGCAGCTGATGGGCCTGGATGGGGAGTCTGGAGTGGATCACATGCCCCTGCTTAAGGGAGTGATCATCCTGGAGGAGTTTTGTAAGGAGCTGGCAGCCATTGCCTTTGTCAAACTTCCTGCCAACAACACAAACTTGCAGAACACTGACACCTTGTGAATCCTTGAACGGAACACTCAGTCAGACGGACGACACCAGTCACAGCTGCTTACTTCTGTTGGTTGCACGAGTAAACAAAGCCATAGATGACCGGAGGTACAAGGGCATTTAATTGTTCTCCAAAGATGGAGAATAGCAAATGTGTAAGATTCATCTCCATTTTTAAGTTTATTGTAAATGCTGACATGTTTTGCTTTGAGTTTAGCTTATGTTATATAATGACTATCTTAAGCAAATTATCACACCTGGAAGTAATGTATGCAGTCGGTCAAATCAATGTAAAAGGTTGCGTTCCATCTCGTCTTTGTAACAGTTGCGTATATAAGATTGCTGTAGGCTATCCCTGGTTCCTGAGATATTGAAACATGTATTAGAATGAGGATTGAGCCGGTATTCATAGTGCTTATGTAGGATCATGTTCATTATGGACTAAACTGATCCTGGGTCAGCACTTTTAATGAAGCTTGATACATGATCATCTGGGCTGTGAGACTGGTTGGAACAACCTAAAACTGTGCGTCATCCAGTTTAACTATTGATACTTTCTGTTTGCATGGCGATGAGTCCATCCTGGAGGCAGAACAGAGCGGTTTCCGCTAGATGGGCCAGGTACAAAGTCTAAATAAATTAATaccaaaaagcaaatgttttAATACAAGGTTAGGTTTAAAAGACTTGTACTtcgtggctgtgccagctagcaACCACTCTGGAGTTGCTTCCAGAACAAGATTCACGACAAAAAACACTAACCTGTGCTTGCCTTTTCTCACGTTTTATTTCTGTGTTGAGGTGATGTCTGGTGTCTTATGTGGACCAGGGTCACAACACATCGGTCTTAATACATTGTTTTAAACATCA

Function

NR:

description
protein FAM160B2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606712.2 False 3258 mRNA 0.47 17 50300082 50312773
XM_021606713.2 True 3233 mRNA 0.47 17 50300083 50312773

Neighbor

gene id symbol gene type direction distance location
si:dkey-220o5.5 LOC106587021 coding upstream 712 50198342 ~ 50299370 (+)
LOC110526093 dmtn coding upstream 102952 50106792 ~ 50208464 (+)
rsph14 rsph14 coding upstream 213123 50072326 ~ 50086959 (+)
kazald3 LOC106587018 coding upstream 245601 50051204 ~ 50054481 (+)
grin1b LOC106587016 coding upstream 299066 49948638 ~ 50001016 (+)
adam9 adam9 coding downstream 27262 50340035 ~ 50417982 (+)
ogdha LOC106587025 coding downstream 130743 50443516 ~ 50513889 (+)
LOC110525036 NA coding downstream 217289 50530062 ~ 50535333 (+)
LOC110526111 zmiz2 coding downstream 228920 50541693 ~ 50630258 (+)
LOC118964908 LOC106587027 coding downstream 351233 50664006 ~ 50670797 (+)
G516751 NA non-coding upstream 198022 50101832 ~ 50102060 (+)
G516748 NA non-coding upstream 203633 50096208 ~ 50096449 (+)
G516745 NA non-coding upstream 207632 50092075 ~ 50092450 (+)
G516744 NA non-coding upstream 208497 50091167 ~ 50091585 (+)
G516918 NA non-coding downstream 71233 50384006 ~ 50385057 (+)
G516933 NA non-coding downstream 120959 50433732 ~ 50433997 (+)
G516964 NA non-coding downstream 160756 50473529 ~ 50506298 (+)
G517000 NA non-coding downstream 207066 50519839 ~ 50536407 (+)
G516990 NA non-coding downstream 377129 50689902 ~ 50699685 (+)
barhl1a barhl1 other upstream 548333 49748788 ~ 49753260 (+)
LOC118964898 LOC106585477 other upstream 912870 49347319 ~ 49387212 (+)
G516011 NA other upstream 992942 49305125 ~ 49307140 (+)
LOC110526066 LOC106584148 other upstream 1053629 49233579 ~ 49260632 (+)
edf1 edf1 other upstream 1112759 49183291 ~ 49187334 (+)
LOC118964907 NA other downstream 407628 50719208 ~ 50743120 (+)
LOC110526128 NA other downstream 599055 50911697 ~ 50922106 (+)
LOC110493840 LOC106605670 other downstream 1965720 52277694 ~ 52279409 (+)
G519603 NA other downstream 2339167 52651940 ~ 52655297 (+)
G521552 prmt3 other downstream 3613169 53925942 ~ 53955130 (+)

Expression


Co-expression Network