LOC110526137 (cep120)



Basic Information


Item Value
gene id LOC110526137
gene name cep120
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 51159434 ~ 51225264 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021606776.2
GAATATATCCGTCCTTGATGCACATGTGTCTCGCAAGGCTGCAGAATCGTTTGCAGTATTGATAATGTTATTTTCGCTGCGTCGATTTCTACCGGGATCTCCATGCTAAAAATGTTGCATGGAGACACATTGCCAATATGATTGGATTACCTGGTTAGTTGAATGTGAAAGAATTAGCTGGAAAGTGGAAGATAGGTGCTGGCAATTAGCTAAACGATCTAGCAAAGTGGTTAGCTTTGTAGTTAGCTGGTTTGGCTGTTTTATGAACATCTGTAACAACGCACGAGTTGAAAATACTGAATTCTTGCGGTATACAGAACGCACCGCAGCATCACCAACCCAGCGTTGCGGACTGCTTCATTAACAATACGACTTCAGCCGGAACACATAGTTTGTGCAACTTCTGGACATGAGGCTTTATGCGATTCTGCAAATGTAACGAAACAGAGGAGGACCTACCTAAATGTGTCCAATATAAACGTTCCAAAACGTTTTCCGTTTGGAGTTAAACGGTTGCTACAGACGAAACgatttgcaacagaatcggcgtaatgaatacacccgaGGTCTCATTCGAAACTTCCGATTTTGAACGAAAGGGGTGGCGGCAAATAATAACAACAAAGCGGGGTATGCAACGGGCAGACTCCCTGGTGAAACATATTTCTGACAGCCATTGCTAGATAAGTCTAGCAAGACAACCAGAAACACTTTGTTAAAAAATAAAGCTAGCTAGCCAGTCTAACTTACACAAATGCCATTATGGCATCGAAGTCCGACCAACTTCTCATCGTGGTGTCCATTCTTGAAGGTCGTCAATTCCCAAAGAGCCAGCGCCACAACCTTATAGTACATGCAAAGTTTGATGGAGAGCAGTTGGCTACAGACCCTGTTGATCACAAGGAGCAGCCTCAGTTCTGCACAGAGTTAGCCTGGGAACTTGATCGCAGGACCTTGCACCAGCACAGACTCCAGCGCACACCCATCAAACTACAGTGCTATGCTGTTGATACAACCACATCTGTGAAAGAGTGTGTTGGATATATTATTCTTGATTTAAGATCTGTGCAAGAAATCAAACAGGCTCCTAAATGGTATCCCTTACTAAGCAGCAAGTACACCAAGTTGAAGCCAGCCATTCTGCTCACCATTGCACTGGAGAATGACACCAAACAAACAGAGTTGTCACTAGAACGATTCAAGGCCAAAAAAGCACCACCAAGACAAGGTTCTCCTGTGTTGAGTAACCTTTTTCCAGAGAAACTAGAGGCTGTTCTGAAAGAGGATGAAGGATATCACCAGATTGGACATCAAGATTATTGCACTGActtgtttgttttgtctgttaCTGTGGCCTTTGCTACCAAGCTTGAACAGTTGATTCCCAGTACGATGAAGCTGGTCGGTGAAGGGTCTGAGTTTTTCTTCTATTATACCCTGCTGGGTAACGACATCACCAGTGAACCTTTCCAAAACCTGATTAGCCCCAGCTTTGAGCCAGAGAGGGCCTCGGTCCGAATCCGCAGCAGTGATACGGTTCTACTGGCCTTTCTCAGCCTGCAGCCCAGTCTTCAGGTCCACCTCTGCTGTGGGAACCACTCCCTTGGCAGCACAGAGGTCTCCCTAGCTGGCCTGGCTAAGAGCAGTGTGGACCTGGAGAAGCAGGTGGCCACAGTGGAGGGGGCCTTCATTCTCCAGCCTCCTAACCGAGCCAAGCAAAGCTTGCCTCCTGTCCCCATGGATCTGCAGCCCACTGTGGGGGTGTCCGTCACACTCAGGAGAGAGGCTCTCACTACTCCGGTGGGAGCTAATGCAGAGGGAGATGGTCCTCTGATTCCACTGAAGACCGGGACTGTGGAGCAcgtcctccctccatctccccctgctGAAAAGTGGCCCCGAACTCCCTCACCTGGCATAAAGTCCCCCATTAAGTCTCCCACGTACCTAGCTGAGTCCCCTCCCAACCCCCTCACAGAAAGCGAGGCTAACAGCCTGCAAGTAGAAGCTGCCTTGCAGGCTCAACCTCTCCCAACTGGTTCGGTCCTTGCTCCGTGCCAAGTGGATGACGAGCCTGAAGGAGGCCTGTCCTCGGTCAGCGTCTCTGCACCAAAGATAGCCATCCCCTCCTCGGCACATCACTACTGTTTCTCCATGGACCTGCGCAGTGTCCGCAACATAAACCTGGGCTTCCCTGTCAGCTGCACACTCCGGTATGCATACCAGTTTTTCGGGAGTGCCGCCCCCATCATGACCAACCCCCCAGTGGAGGTGAAGAGGAACATGGAGGTGTTCCTGCCCCAGTCGTACTGTGCCTTTGATTTTGCCGCTCTACCTCACCAAGTCCAGGACACCTTCCTCAGGGTGCCcctagtggtggaggtgtggaaCAAAAATACCAGCTCCAGAGACATTCTCCTGGGCACGGCCAGCATACAGCTGTCCCACCTCCTGACTGCAGAGAAGAGCCGCTTCCTGGGCCCCATGGGCCAGCAGCACTGGAGGCAGACCTTCTCCGAGAGGATCCCAGTCATAAAGGCCCAAGGgatttcagcggcagggactggGCCCAGTGAAAAGGTGGCTGAGCTGTGCTACGTCACAACCCTGGAGAACCTTGGTTTAGTCAAGGTCCAAGATATTGTCATGTCTGAGTCCTCCCAGAATGGGTATTCTGTGGCACAAAAGACGGTGCCAGCTCTGCGACCAGCTCCTCCAAGCAGTGCAGGCGGAGTCCCCACTGAGCCCCGCGAGACACTGGAGTACAGGGCTGCCCTGGAGCTGGAGATGTGGAAGGAGATGCAGGAGGATCTCTTTGATGACCAGCTGAAGAAGAAAGAGCTGGGCCATATGCAGGCGTTGGCCGAGGAATGGAAGAAGAGGGATCGGGAGCGTGAGTCTCTGGTCAGAAAAAAGGAGGTAGAGTACAACATCTTGGAGGAGCAGCTTCAGAAGATTCTGGCTGActtggagaagagagagaagcatcTAGGCCATGCAGAAATGGAGATGCAGCGCTTGCAGAGGGAGATGCGGGCTGAGCACGAGTTAAGCATGTGCAAGCTGCAGGAGAGCGGCCGGCGGCTCCGCGAGGACTGCACTCACCAGGTGGATCTGGAGAGGTCAAGGGTCAGGCAGCTGGAGGAGGAGCGTGGCAGGCAGCAACAGCAGATGCTGGATGCAGAGAACAAATACAAGCTGTTGGAGAAGGAATACCAGCAGTTTCGGGAGCAGCAGAGCATTCGCCCTGAGATCAGACTACAGTCTGAGATCAACCTGCTAAGTCTTGAGAAGGTGGAACTTGAAAGGACACTGGAATCGACGACAAAGTCTAAACTTCATTACAAGCAGCAGTGGGGGCGTGCTTTGAAAGAACTGGCCAGATTCAAACAGagagagcaggagagcgcCATGACACGGCTgaagaagcagcagcaggagctggAGACCATGAGGCTGCGCTACCTGGCAGCCGAGGAGAAGGAAGCCGTCAAAAGCGAGAAACACGAGCTGGAGGACATCAGGAACGAGCTGAACAGGTTAAAACAACAGGAGGACAAGAAGCCATGGGGCAGCAGCTCTGCTGGCCCCGCCGTGTCTCTCAACGAGAGTGCCGATGATCACCTCAGCCGGctgctggaggagagagacactcTGTTACGCACAGGCGTGTATACACACGAAGACCGCATCATCAGCGAGCTCAACAGGCAAATCCAAGAGGCCATGGCACACAGGGTGGACCACTAGTCTAGCATCTCATGCGAATGCATGATAGAAAACCAGCCATCAGACTCATCTAAATGTGAAGTGTTGATCAATTCCTAGTGTGCCAAATGGTCCGAATTGGACTATCAGATCACTTCAAGCTCCAGGGACAGTAGAAAGTTAGCACAAAGGCAGAAAACTTGAAGGAACAAGTGAGAGTGTCTGCCTTTGCAAAGGATTGACTTTGTTTTGTGTAAGTGTTTTTGGTTATTTTTCCATTATCATTTTGGCTTTCTTTGTTACATTTGTTTTTATTAGTGTTATTATTAGACTAGATTATCTGTTTTATACTATGGGCTAATGTCCACATTTTAGAGATGATTGTGGAAAGGGAAAGGCCTAAAATTATTTTACCAAGCGTTACATTCCAAATGGATATGGTTTAAATTATTAGAACGAGACACTAGTGGTTGAAGGTTCGTTGGTGTGTTTATACTGAATAAGTTGTCTGTATACACCAGGTGGCGCTGTAACATCAGCAAAGCTACATGTAAATTTACCAGTTTCTTTTTTCAGATGCAGAATTAGTGTGATAATTATTTGTTTGTCATGACTAACATGCATAGACAATTCTTGAATGTATATTGATTTGTgtgtattaaataaatacattattttggGATTATA
>XM_036980406.1
ATATATCCGTCCTTGATGCACATGTGTCTCGCAAGGCTGCAGAATCGTTTGCAGTATTGATAATGTTATTTTCGCTGCGTCGATTTCTACCGGGATCTCCATGCTAAAAATGTTGCATGGAGACACATTGCCAATATGATTGGATTACCTGGTCGTCAATTCCCAAAGAGCCAGCGCCACAACCTTATAGTACATGCAAAGTTTGATGGAGAGCAGTTGGCTACAGACCCTGTTGATCACAAGGAGCAGCCTCAGTTCTGCACAGAGTTAGCCTGGGAACTTGATCGCAGGACCTTGCACCAGCACAGACTCCAGCGCACACCCATCAAACTACAGTGCTATGCTGTTGATACAACCACATCTGTGAAAGAGTGTGTTGGATATATTATTCTTGATTTAAGATCTGTGCAAGAAATCAAACAGGCTCCTAAATGGTATCCCTTACTAAGCAGCAAGTACACCAAGTTGAAGCCAGCCATTCTGCTCACCATTGCACTGGAGAATGACACCAAACAAACAGAGTTGTCACTAGAACGATTCAAGGCCAAAAAAGCACCACCAAGACAAGGTTCTCCTGTGTTGAGTAACCTTTTTCCAGAGAAACTAGAGGCTGTTCTGAAAGAGGATGAAGGATATCACCAGATTGGACATCAAGATTATTGCACTGActtgtttgttttgtctgttaCTGTGGCCTTTGCTACCAAGCTTGAACAGTTGATTCCCAGTACGATGAAGCTGGTCGGTGAAGGGTCTGAGTTTTTCTTCTATTATACCCTGCTGGGTAACGACATCACCAGTGAACCTTTCCAAAACCTGATTAGCCCCAGCTTTGAGCCAGAGAGGGCCTCGGTCCGAATCCGCAGCAGTGATACGGTTCTACTGGCCTTTCTCAGCCTGCAGCCCAGTCTTCAGGTCCACCTCTGCTGTGGGAACCACTCCCTTGGCAGCACAGAGGTCTCCCTAGCTGGCCTGGCTAAGAGCAGTGTGGACCTGGAGAAGCAGGTGGCCACAGTGGAGGGGGCCTTCATTCTCCAGCCTCCTAACCGAGCCAAGCAAAGCTTGCCTCCTGTCCCCATGGATCTGCAGCCCACTGTGGGGGTGTCCGTCACACTCAGGAGAGAGGCTCTCACTACTCCGGTGGGAGCTAATGCAGAGGGAGATGGTCCTCTGATTCCACTGAAGACCGGGACTGTGGAGCAcgtcctccctccatctccccctgctGAAAAGTGGCCCCGAACTCCCTCACCTGGCATAAAGTCCCCCATTAAGTCTCCCACGTACCTAGCTGAGTCCCCTCCCAACCCCCTCACAGAAAGCGAGGCTAACAGCCTGCAAGTAGAAGCTGCCTTGCAGGCTCAACCTCTCCCAACTGGTTCGGTCCTTGCTCCGTGCCAAGTGGATGACGAGCCTGAAGGAGGCCTGTCCTCGGTCAGCGTCTCTGCACCAAAGATAGCCATCCCCTCCTCGGCACATCACTACTGTTTCTCCATGGACCTGCGCAGTGTCCGCAACATAAACCTGGGCTTCCCTGTCAGCTGCACACTCCGGTATGCATACCAGTTTTTCGGGAGTGCCGCCCCCATCATGACCAACCCCCCAGTGGAGGTGAAGAGGAACATGGAGGTGTTCCTGCCCCAGTCGTACTGTGCCTTTGATTTTGCCGCTCTACCTCACCAAGTCCAGGACACCTTCCTCAGGGTGCCcctagtggtggaggtgtggaaCAAAAATACCAGCTCCAGAGACATTCTCCTGGGCACGGCCAGCATACAGCTGTCCCACCTCCTGACTGCAGAGAAGAGCCGCTTCCTGGGCCCCATGGGCCAGCAGCACTGGAGGCAGACCTTCTCCGAGAGGATCCCAGTCATAAAGGCCCAAGGgatttcagcggcagggactggGCCCAGTGAAAAGGTGGCTGAGCTGTGCTACGTCACAACCCTGGAGAACCTTGGTTTAGTCAAGGTCCAAGATATTGTCATGTCTGAGTCCTCCCAGAATGGGTATTCTGTGGCACAAAAGACGGTGCCAGCTCTGCGACCAGCTCCTCCAAGCAGTGCAGGCGGAGTCCCCACTGAGCCCCGCGAGACACTGGAGTACAGGGCTGCCCTGGAGCTGGAGATGTGGAAGGAGATGCAGGAGGATCTCTTTGATGACCAGCTGAAGAAGAAAGAGCTGGGCCATATGCAGGCGTTGGCCGAGGAATGGAAGAAGAGGGATCGGGAGCGTGAGTCTCTGGTCAGAAAAAAGGAGGTAGAGTACAACATCTTGGAGGAGCAGCTTCAGAAGATTCTGGCTGActtggagaagagagagaagcatcTAGGCCATGCAGAAATGGAGATGCAGCGCTTGCAGAGGGAGATGCGGGCTGAGCACGAGTTAAGCATGTGCAAGCTGCAGGAGAGCGGCCGGCGGCTCCGCGAGGACTGCACTCACCAGGTGGATCTGGAGAGGTCAAGGGTCAGGCAGCTGGAGGAGGAGCGTGGCAGGCAGCAACAGCAGATGCTGGATGCAGAGAACAAATACAAGCTGTTGGAGAAGGAATACCAGCAGTTTCGGGAGCAGCAGAGCATTCGCCCTGAGATCAGACTACAGTCTGAGATCAACCTGCTAAGTCTTGAGAAGGTGGAACTTGAAAGGACACTGGAATCGACGACAAAGTCTAAACTTCATTACAAGCAGCAGTGGGGGCGTGCTTTGAAAGAACTGGCCAGATTCAAACAGagagagcaggagagcgcCATGACACGGCTgaagaagcagcagcaggagctggAGACCATGAGGCTGCGCTACCTGGCAGCCGAGGAGAAGGAAGCCGTCAAAAGCGAGAAACACGAGCTGGAGGACATCAGGAACGAGCTGAACAGGTTAAAACAACAGGAGGACAAGAAGCCATGGGGCAGCAGCTCTGCTGGCCCCGCCGTGTCTCTCAACGAGAGTGCCGATGATCACCTCAGCCGGctgctggaggagagagacactcTGTTACGCACAGGCGTGTATACACACGAAGACCGCATCATCAGCGAGCTCAACAGGCAAATCCAAGAGGCCATGGCACACAGGGTGGACCACTAGTCTAGCATCTCATGCGAATGCATGATAGAAAACCAGCCATCAGACTCATCTAAATGTGAAGTGTTGATCAATTCCTAGTGTGCCAAATGGTCCGAATTGGACTATCAGATCACTTCAAGCTCCAGGGACAGTAGAAAGTTAGCACAAAGGCAGAAAACTTGAAGGAACAAGTGAGAGTGTCTGCCTTTGCAAAGGATTGACTTTGTTTTGTGTAAGTGTTTTTGGTTATTTTTCCATTATCATTTTGGCTTTCTTTGTTACATTTGTTTTTATTAGTGTTATTATTAGACTAGATTATCTGTTTTATACTATGGGCTAATGTCCACATTTTAGAGATGATTGTGGAAAGGGAAAGGCCTAAAATTATTTTACCAAGCGTTACATTCCAAATGGATATGGTTTAAATTATTAGAACGAGACACTAGTGGTTGAAGGTTCGTTGGTGTGTTTATACTGAATAAGTTGTCTGTATACACCAGGTGGCGCTGTAACATCAGCAAAGCTACATGTAAATTTACCAGTTTCTTTTTTCAGATGCAGAATTAGTGTGATAATTATTTGTTTGTCATGACTAACATGCATAGACAATTCTTGAATGTATATTGATTTGTgtgtattaaataaatacattattttggGATTATA

Function


symbol description
cep120 Acts upstream of or within cilium assembly.

NR:

description
centrosomal protein of 120 kDa

GO: NA

KEGG:

id description
K16459 CEP120; centrosomal protein CEP120

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021606776.2 False 4395 mRNA 0.49 20 51159434 51225264
XM_036980406.1 True 3735 mRNA 0.50 20 51159436 51225264
Loading

Neighbor


gene id symbol gene type direction distance location
znf608 znf608 coding upstream 31290 51113986 ~ 51128144 (+)
LOC110526132 LOC106587036 coding upstream 142306 50991573 ~ 51017128 (+)
LOC110526128 NA coding upstream 237328 50911697 ~ 50922106 (+)
LOC110526127 LOC106586990 coding upstream 258340 50899096 ~ 50901094 (+)
LOC110526125 LOC106587031 coding upstream 312835 50817728 ~ 50846599 (+)
LOC118964909 NA coding downstream 487526 51712790 ~ 51718231 (+)
homer1b homer1 coding downstream 658019 51883283 ~ 52006875 (+)
LOC110493840 LOC106605670 coding downstream 1052430 52277694 ~ 52279409 (+)
otpb LOC106587051 coding downstream 1159878 52385142 ~ 52390468 (+)
mapk8ip1b LOC106587053 coding downstream 1299092 52524356 ~ 52645645 (+)
G518036 NA non-coding upstream 11057 51148157 ~ 51148377 (+)
G518012 NA non-coding upstream 25539 51133659 ~ 51133895 (+)
G517998 NA non-coding upstream 49341 51109782 ~ 51110093 (+)
G517978 NA non-coding upstream 65252 51093943 ~ 51094182 (+)
G517961 NA non-coding upstream 77355 51081713 ~ 51082079 (+)
G518132 NA non-coding downstream 4732 51229996 ~ 51230526 (+)
G518133 NA non-coding downstream 6261 51231525 ~ 51231822 (+)
G518182 NA non-coding downstream 68924 51294188 ~ 51294400 (+)
G518185 NA non-coding downstream 75131 51300395 ~ 51300690 (+)
G518186 NA non-coding downstream 76004 51301268 ~ 51301538 (+)
LOC118964907 NA other upstream 424198 50719208 ~ 50743120 (+)
barhl1a barhl1 other upstream 1407685 49748788 ~ 49753260 (+)
LOC118964898 LOC106585477 other upstream 1772222 49347319 ~ 49387212 (+)
G516011 NA other upstream 1852294 49305125 ~ 49307140 (+)
G519603 NA other downstream 1426676 52651940 ~ 52655297 (+)
G521552 prmt3 other downstream 2700678 53925942 ~ 53955130 (+)
G521914 NA other downstream 3044661 54269925 ~ 54270259 (+)
LOC110526161 LOC106587065 other downstream 3654435 54793125 ~ 54954478 (+)

Expression


LOC110526137(cep120) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 60.
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LOC110526137(cep120) Expression in each Bioproject

Bar chart with 21 bars.
LOC110526137(cep120) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network