LOC118965121


Basic Information

Item Value
gene id LOC118965121
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 53163095 ~ 53163203 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052452.1
TGTGAGCGTGATAAATTGCACTGTATCGTGGCGCTGGTTGCAGTGGCACAGGCGTCTCGTCCCGCACTTCGCTGGGGACACCATGTCCACAGGGACCATCTGACTCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052452.1 True 109 mRNA 0.59 1 53163095 53163203

Neighbor

gene id symbol gene type direction distance location
LOC118965122 NA coding upstream 4080 53158911 ~ 53159015 (+)
LOC118965081 NA coding upstream 95352 53066027 ~ 53067743 (+)
mapk8ip1b LOC106587053 coding upstream 517450 52524356 ~ 52645645 (+)
LOC110502468 LOC106605670 coding upstream 604183 52555005 ~ 52558912 (+)
otpb LOC106587051 coding upstream 772627 52385142 ~ 52390468 (+)
LOC110526153 LOC106587057 coding downstream 191575 53354778 ~ 53759596 (+)
LOC110526155 LOC106587070 coding downstream 856909 54020112 ~ 54035663 (+)
LOC110526157 LOC106587066 coding downstream 919542 54082745 ~ 54104736 (+)
brsk2b LOC106587064 coding downstream 1289251 54452454 ~ 54639254 (+)
LOC110526161 LOC106587065 coding downstream 1629922 54793125 ~ 54954478 (+)
G520560 NA non-coding upstream 8481 53145715 ~ 53154614 (+)
G520531 NA non-coding upstream 53728 53109139 ~ 53109367 (+)
G520509 LOC100136012 non-coding upstream 70931 53091715 ~ 53092164 (+)
G520508 NA non-coding upstream 72058 53090782 ~ 53091037 (+)
G520507 NA non-coding upstream 73461 53089366 ~ 53089634 (+)
G520753 NA non-coding downstream 117815 53281018 ~ 53281230 (+)
G520760 NA non-coding downstream 123216 53286419 ~ 53286990 (+)
G520958 NA non-coding downstream 394186 53557389 ~ 53557596 (+)
G520959 NA non-coding downstream 394673 53557876 ~ 53558084 (+)
G520976 NA non-coding downstream 411149 53574352 ~ 53574555 (+)
G519603 NA other upstream 507798 52651940 ~ 52655297 (+)
LOC110493840 LOC106605670 other upstream 884097 52277694 ~ 52279409 (+)
LOC110526128 NA other upstream 2240998 50911697 ~ 50922106 (+)
LOC118964907 NA other upstream 2427859 50719208 ~ 50743120 (+)
barhl1a barhl1 other upstream 3411346 49748788 ~ 49753260 (+)
G521552 prmt3 other downstream 762739 53925942 ~ 53955130 (+)
G521914 NA other downstream 1106722 54269925 ~ 54270259 (+)
G523529 NA other downstream 2321046 55484249 ~ 55484607 (+)
LOC110526167 LOC106587078 other downstream 2400545 55563439 ~ 55568167 (+)

Expression


Co-expression Network