LOC110526159 (LOC106587061)


Basic Information

Item Value
gene id LOC110526159
gene name LOC106587061
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 54639329 ~ 54669756 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606815.2
ATGTCAGGCACCTTCAGTCCCAAGATGACGAAAACCCTGGAAGATCTGAGTCTGGACTCGGGCTACGGAGCTGGGGACTCCTGCAAGTCCCTCAGCCTCTCCTCGTCCAGGTCCCGGCActcccacacccacccacaccggGGGACCTGGTGGAACCAGATCAGCTCTCTGAGCAGTAGGAACGCCAGCTGGGACACAGTCAACACGGTGCTGCCTGAGGATCCAGAGGACATACTCTCCAAGTGTCCTCGTCTGCCGACGCTGGAAGAGGTCCCCTGGACCGACCAGGAGATTGCTGAAGTCCTGCGTAAAGTAGCAGGTGAGGAGATGGCTTTTTCCGGTGACGCAGTCAGCCGTCTCTCGCTGCTCTTACAGAGGGCTCTGGTTCGGATCTCCCGGGAGGCTCAGAGACTGAGTGAGCTACACCGGCGATGCACGCGCTTCGAGGTGCAGAGCGCCATTCGGCTGGTGCTGAGCTGGGGGCTGGCTGAGCGGTGCGTGGCTGGCACGGTGAGGGCCATTTCTCTGTACAGCATGAGCTCGGGCGAGACACTGCGTCAACGGGGCAAGTCCTCGCGCTGCGGGCTCAGCCTCCCGGTGGGACGGTTCTACAGGTGGATGGTGGATACGCGTGTGTCAGTGCGCGTGCATGAGCACGCAGCCATTTGCCTGGCCGCGTGCGTGGAGAGCCTTGTGGAGGAAGTGGTCGTGCGGGTGTTGATGATGGCagaggagcgggagagagagcgcAGGGGCACCTGTTGCCTGGTAAATATTGAGGTCCTGGACGGGGTCGTCAATGACGACGCGGAGCTGTGGGGAGTGATGCAGAACTACGAGCATCTGATATGCGGGAAAAATGCCAatgGTGAGCTATCCCTGCCAGCCCATGTCAGTCCATACACAAAGGATTCCCGGGCACCAATGGAGAGCAGGGAGGATGCCTACGCCCACCTGGAGCTACGTACCTTGGAACAGTCCCTTCTGGCCACATGCGTGGGCAGCATCACAGAactcaGTGACCTGGTGTCACGGTCCATGCACCACATACAGCGCCTACGCGCAGATAGCCACTCCCTCAGCCCTATTTGCCCAGCGAGTCAGCATCCAGTATTCTGGGCGCCCGATGCCATGCGTACCCTCTACTACTTCCTGTCTAGCCCACAGATGGAATCCCTGGAGAACCCAAATCTAGAGCCCCCCAGGATGGCCCTGAGCAGAGAGAGACTGTTTATGCTCCTTCCCCCTCTGATGGAGTGGATACGGGTTGCCGTGGTGCACGCGGAGCACCGCCGCAGCCTATTGGTGGACAGCGATGATGTCAGACAGACCGCCAGACAGCTCCTCCCAGGACTGGACTGTGAGCCCAGACAGCTGAGgcctGAGTGTTGTTCCAGCTCATTTAGGCGTCTGGACTCTAAGGCTGCCACAGAGAAGCTTCAGCTGGATCTGGGCTTCCGCATGCTGACCTGTGGCAGAGCGGACCTGATTGGTCAGGCCACACAGCTACTGGGACCATCAGGGGTTAACACTATGGATGACCAGGGAATGACCCCTCTGATGTACGCATGTTCGTGTGGAGACGAGGCTCTAGTCCAGATACTGGTGGAGGCTGGAGCCAACCTGGACCTGGCGGTTCCCTGCTGCTCCCCCAGACAGCCCTCAGTCCACCCAGACAGTCGTGGTTGGGTGGCCCTCACCTTCGCTGTGCTGCATGGACACCTCTCAGTATCTCAGCTGCTGTTGGAGGTGGGTGCAGACGTGGAGGGGACTGCTGTGACTTCCAGCCAGGAGAGTTCTGCTGAGACTCCTCTGCAGCTGGCCTCTGCTGCTGGAAACTATGAAATGGTGAGCCTGCTGCTGGCCCACGGGGCCGACCCGCTACTCAGAGTGCATGATTGGAACGCTCTGACATCCCCGCTCTACGAGGACATGAACTGCTTCAGCTACGCCGCTGCACATGGACACAGGAACATCCTGAGGAGGCTTCTGACCCAGCCCCAGCAGAGGAAGGAGGACATTCTCTCTCTGCAGGAGATACTGGCTGAGGGGTtccaggaggaggaagaagaggctgGCTCACTACCTCCCCCAAGCCTCAGCCCTTGTAGCTCCGCTGTCTGCCCCAGTAGCTCCAGCCCCATGCCCAGGCTATGTAAGGCCAGGATGAAGGCCCTGCAGCAGGCTGCCTACTACAGCGCTGAGCACGGTTACTTGGATGTCACCATGGAGCTACGATCACTGGGTGTCCCCTGGAAGCTCCATGTGTGGCTGGAGTCCTTCCACGTAGCCCAACAACAATCCAGGGATGAggtgaccctctctctcctcagagacTTCACAACTATCAGGCCACAGGACTACTGCCAGGAGCTGGTCTCGCCCGCTCTACCGCTCTTGTTTAACTTGTTTGCGACCAGCAAGGACTATGCCATAACCAAGACACTGTCAGCCATCTTCTCTCACTGTTACGGCTCTGCTCCTACTCCCTCTGTTCCTCCGATGGACCTCACTCTCTCCACACAGCTAGATGCTCATTTCCTGAACAACCCAGAGATGTCTGACATAATGTTGTTAGTGGAAGGCCGTCCATTCTACACCCACAGGGTTCTCCTCATGTCTGCCTCCAAGAGGTTTCGGTACCTGCTGAGTTTCTGTGGGTCAGACACCAGCACCATCCACATCTCTGACATCACATACAGCACCTTCCAGAGGATGATGAGCTGTCTGTACTGTGGGGGGACTGAAGGGCTGAGGCTGTCACAGGCTGACGCTATGGAGCTGCTGCCAGTGGTCTGTTTCTTCCAGCTGGAGGTGCTAGAGAGGCAGTGTGAGAGCCTGCTCTCCCAGAGTATCACCCTGGACAACGCTGTCAGCATCTACTTGATGTCTACGGATCACGGGGCGGCAGAGCTCAGGAGGTTCTGTGAAGGTTTCTTCCTGCAGCACATGGAACAGCTCCTGGCGAGAGAGGACTTCCACAGGCTGCTCCTGGGAGGGGCCCATCAGGACCAGCTCTCCCCAGGGACAGAGACCCGGAGTGGACCATGTCAGGAGcaacactcctctctcctcctggagGATCTGGAGGTCACTTTGGTCCACAGGCTGCTCTCGCTGTACCCTCCCTGCAGAGAGTAAGCCACCGGCTGCGTCTCAGTAGTCATAGTTGGCTTCTTTGTTCTTCCATCGTCTCGTTTCCTTCAACTGTACTGGTGTGAAATAACTACATGTGAAAGACAAGTAGCTATATCTGCTCTTAAACGTCAGTTAGGGTGAAGGAaatgggatgaggagaggaggccaTGTTAGAGTATTGAGATGTATCCCATGTGGGGAGAAGGACAGACACACCAGCATTCCTGGAGATAAATAACCGGTGTAGTGTAGCGCAGTATCTCGCAGTGTGGTGATGTCACCACTGTTGCCAGCACAGGTTGGTAATGCTAATCTGTCACCAGGGCCTAGGTGAATCTGCCACCGGACAGAACACTTTTACTGTGACCTAACAGGCCCTCAAAcctgctctctctgcctctgtgaaTGCCCAAGGTACTGCGAAGACAGTTACTTTAGTTTCAGTGTGATGGTTAGAGAAGCAATGGTAGTTAGCAGCTTCTTGCCACTCATAGTGAAAGGACAACTGAAGGTGCTGCAAAAAAAAAGTTAACGAGACAGAAGCATCATTTTGAGTTTTGCAGTTGTGGAACGCAACCTCACCATCAATTCCTCAGGTAGCCCAGAGAGCAGGAAGGAGGATTGATGGATGAACTGGAGAAGTACTGCTGCCGTCTAGAGATGTGTAGGACTTGGTCCACGGGGCTGACATAGAAAATCGAGAAATAGTCCATTGCTTAAGAGAGGAAATGGATGCAATGTACTACGGCTGGAATTCGATCTAGAGTATGATGAAGGTTTCTGGATATACCGCCAATATAATAACAGGTACTGAGACTTCTTTGCTAGTAAGAAATAAAGCATTTAGAGCATTTTGGACTGCTGTTACTTACTAGAGTCCATCCTCTCTCGTGTGGATGGAACTTGGGGTTGATATATTGTACTGGAATAACAGAGCTCTGAATATGTTATTGTTCTGTAGATACAGCGTGTCAATAAACGTTTTTTTTGCTCATAATAATTAACATCGGCATTTTTA
>XM_036980438.1
CATTAGAACCAGCAGAGCAGTGCATGTGCCCGTGGAGCTGCGACTGGCAGCAGGCGAGACTGCGTCCATGGACAAACATCGACACTACTAGAGAAGTGATTGAATAGACTTATCTACAGTCATTTAACTACCTTAAACCATATATCTATACTTGGAGTGGAAACGTTCACGGGGTATATTTCTTGCAGTGCGTAAAAGTGACCTTCGAATCTCACAGAAAAGAAGCACGTCTCAAGAAAGCGACAATAATGTCAGGCACCTTCAGTCCCAAGATGACGAAAACCCTGGAAGATCTGAGTCTGGACTCGGGCTACGGAGCTGGGGACTCCTGCAAGTCCCTCAGCCTCTCCTCGTCCAGGTCCCGGCActcccacacccacccacaccggGGGACCTGGTGGAACCAGATCAGCTCTCTGAGCAGTAGGAACGCCAGCTGGGACACAGTCAACACGGTGCTGCCTGAGGATCCAGAGGACATACTCTCCAAGTGTCCTCGTCTGCCGACGCTGGAAGAGGTCCCCTGGACCGACCAGGAGATTGCTGAAGTCCTGCGTAAAGTAGCAGGTGAGGAGATGGCTTTTTCCGGTGACGCAGTCAGCCGTCTCTCGCTGCTCTTACAGAGGGCTCTGGTTCGGATCTCCCGGGAGGCTCAGAGACTGAGTGAGCTACACCGGCGATGCACGCGCTTCGAGGTGCAGAGCGCCATTCGGCTGGTGCTGAGCTGGGGGCTGGCTGAGCGGTGCGTGGCTGGCACGGTGAGGGCCATTTCTCTGTACAGCATGAGCTCGGGCGAGACACTGCGTCAACGGGGCAAGTCCTCGCGCTGCGGGCTCAGCCTCCCGGTGGGACGGTTCTACAGGTGGATGGTGGATACGCGTGTGTCAGTGCGCGTGCATGAGCACGCAGCCATTTGCCTGGCCGCGTGCGTGGAGAGCCTTGTGGAGGAAGTGGTCGTGCGGGTGTTGATGATGGCagaggagcgggagagagagcgcAGGGGCACCTGTTGCCTGGTAAATATTGAGGTCCTGGACGGGGTCGTCAATGACGACGCGGAGCTGTGGGGAGTGATGCAGAACTACGAGCATCTGATATGCGGGAAAAATGCCAatgGTGAGCTATCCCTGCCAGCCCATGTCAGTCCATACACAAAGGATTCCCGGGCACCAATGGAGAGCAGGGAGGATGCCTACGCCCACCTGGAGCTACGTACCTTGGAACAGTCCCTTCTGGCCACATGCGTGGGCAGCATCACAGAactcaGTGACCTGGTGTCACGGTCCATGCACCACATACAGCGCCTACGCGCAGATAGCCACTCCCTCAGCCCTATTTGCCCAGCGAGTCAGCATCCAGTATTCTGGGCGCCCGATGCCATGCGTACCCTCTACTACTTCCTGTCTAGCCCACAGATGGAATCCCTGGAGAACCCAAATCTAGAGCCCCCCAGGATGGCCCTGAGCAGAGAGAGACTGTTTATGCTCCTTCCCCCTCTGATGGAGTGGATACGGGTTGCCGTGGTGCACGCGGAGCACCGCCGCAGCCTATTGGTGGACAGCGATGATGTCAGACAGACCGCCAGACAGCTCCTCCCAGGACTGGACTGTGAGCCCAGACAGCTGAGgcctGAGTGTTGTTCCAGCTCATTTAGGCGTCTGGACTCTAAGGCTGCCACAGAGAAGCTTCAGCTGGATCTGGGCTTCCGCATGCTGACCTGTGGCAGAGCGGACCTGATTGGTCAGGCCACACAGCTACTGGGACCATCAGGGGTTAACACTATGGATGACCAGGGAATGACCCCTCTGATGTACGCATGTTCGTGTGGAGACGAGGCTCTAGTCCAGATACTGGTGGAGGCTGGAGCCAACCTGGACCTGGCGGTTCCCTGCTGCTCCCCCAGACAGCCCTCAGTCCACCCAGACAGTCGTGGTTGGGTGGCCCTCACCTTCGCTGTGCTGCATGGACACCTCTCAGTATCTCAGCTGCTGTTGGAGGTGGGTGCAGACGTGGAGGGGACTGCTGTGACTTCCAGCCAGGAGAGTTCTGCTGAGACTCCTCTGCAGCTGGCCTCTGCTGCTGGAAACTATGAAATGGTGAGCCTGCTGCTGGCCCACGGGGCCGACCCGCTACTCAGAGTGCATGATTGGAACGCTCTGACATCCCCGCTCTACGAGGACATGAACTGCTTCAGCTACGCCGCTGCACATGGACACAGGAACATCCTGAGGAGGCTTCTGACCCAGCCCCAGCAGAGGAAGGAGGACATTCTCTCTCTGCAGGAGATACTGGCTGAGGGGTtccaggaggaggaagaagaggctgGCTCACTACCTCCCCCAAGCCTCAGCCCTTGTAGCTCCGCTGTCTGCCCCAGTAGCTCCAGCCCCATGCCCAGGCTATGTAAGGCCAGGATGAAGGCCCTGCAGCAGGCTGCCTACTACAGCGCTGAGCACGGTTACTTGGATGTCACCATGGAGCTACGATCACTGGGTGTCCCCTGGAAGCTCCATGTGTGGCTGGAGTCCTTCCACGTAGCCCAACAACAATCCAGGGATGAggtgaccctctctctcctcagagacTTCACAACTATCAGGCCACAGGACTACTGCCAGGAGCTGGTCTCGCCCGCTCTACCGCTCTTGTTTAACTTGTTTGCGACCAGCAAGGACTATGCCATAACCAAGACACTGTCAGCCATCTTCTCTCACTGTTACGGCTCTGCTCCTACTCCCTCTGTTCCTCCGATGGACCTCACTCTCTCCACACAGCTAGATGCTCATTTCCTGAACAACCCAGAGATGTCTGACATAATGTTGTTAGTGGAAGGCCGTCCATTCTACACCCACAGGGTTCTCCTCATGTCTGCCTCCAAGAGGTTTCGGTACCTGCTGAGTTTCTGTGGGTCAGACACCAGCACCATCCACATCTCTGACATCACATACAGCACCTTCCAGAGGATGATGAGCTGTCTGTACTGTGGGGGGACTGAAGGGCTGAGGCTGTCACAGGCTGACGCTATGGAGCAGCTGCTGCCAGTGGTCTGTTTCTTCCAGCTGGAGGTGCTAGAGAGGCAGTGTGAGAGCCTGCTCTCCCAGAGTATCACCCTGGACAACGCTGTCAGCATCTACTTGATGTCTACGGATCACGGGGCGGCAGAGCTCAGGAGGTTCTGTGAAGGTTTCTTCCTGCAGCACATGGAACAGCTCCTGGCGAGAGAGGACTTCCACAGGCTGCTCCTGGGAGGGGCCCATCAGGACCAGCTCTCCCCAGGGACAGAGACCCGGAGTGGACCATGTCAGGAGcaacactcctctctcctcctggagGATCTGGAGGTCACTTTGGTCCACAGGCTGCTCTCGCTGTACCCTCCCTGCAGAGAGTAAGCCACCGGCTGCGTCTCAGTAGTCATAGTTGGCTTCTTTGTTCTTCCATCGTCTCGTTTCCTTCAACTGTACTGGTGTGAAATAACTACATGTGAAAGACAAGTAGCTATATCTGCTCTTAAACGTCAGTTAGGGTGAAGGAaatgggatgaggagaggaggccaTGTTAGAGTATTGAGATGTATCCCATGTGGGGAGAAGGACAGACACACCAGCATTCCTGGAGATAAATAACCGGTGTAGTGTAGCGCAGTATCTCGCAGTGTGGTGATGTCACCACTGTTGCCAGCACAGGTTGGTAATGCTAATCTGTCACCAGGGCCTAGGTGAATCTGCCACCGGACAGAACACTTTTACTGTGACCTAACAGGCCCTCAAAcctgctctctctgcctctgtgaaTGCCCAAGGTACTGCGAAGACAGTTACTTTAGTTTCAGTGTGATGGTTAGAGAAGCAATGGTAGTTAGCAGCTTCTTGCCACTCATAGTGAAAGGACAACTGAAGGTGCTGCAAAAAAAAAGTTAACGAGACAGAAGCATCATTTTGAGTTTTGCAGTTGTGGAACGCAACCTCACCATCAATTCCTCAGGTAGCCCAGAGAGCAGGAAGGAGGATTGATGGATGAACTGGAGAAGTACTGCTGCCGTCTAGAGATGTGTAGGACTTGGTCCACGGGGCTGACATAGAAAATCGAGAAATAGTCCATTGCTTAAGAGAGGAAATGGATGCAATGTACTACGGCTGGAATTCGATCTAGAGTATGATGAAGGTTTCTGGATATACCGCCAATATAATAACAGGTACTGAGACTTCTTTGCTAGTAAGAAATAAAGCATTTAGAGCATTTTGGACTGCTGTTACTTACTAGAGTCCATCCTCTCTCGTGTGGATGGAACTTGGGGTTGATATATTGTACTGGAATAACAGAGCTCTGAATATGTTATTGTTCTGTAGATACAGCGTGTCAATAAACGTTTTTTTTGCTCATAATAATTAACATCGGCATTTTTA

Function

NR:

description
ankyrin repeat and BTB/POZ domain-containing protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606815.2 False 4156 mRNA 0.55 15 54639329 54669508
XM_036980438.1 True 4407 mRNA 0.55 15 54639329 54669756

Neighbor

gene id symbol gene type direction distance location
LOC110526926 rassf7 coding downstream 214694 54410210 ~ 54424635 (-)
si:ch211-210p4.6 LOC106587062 coding downstream 237213 54385755 ~ 54402116 (-)
LOC110526925 LOC106587060 coding downstream 268428 54125497 ~ 54370901 (-)
LOC118965035 NA coding downstream 293254 54337119 ~ 54346075 (-)
prmt3 prmt3 coding downstream 632046 53899067 ~ 54007283 (-)
si:ch211-288d18.1 LOC106587068 coding upstream 3758 54673514 ~ 54712464 (-)
LOC118964910 NA coding upstream 408556 55078312 ~ 55111415 (-)
LOC110526929 NA coding upstream 486532 55156288 ~ 55172862 (-)
LOC110526164 LOC106561915 coding upstream 779351 55449107 ~ 55458630 (-)
LOC110526165 LOC106587073 coding upstream 795280 55465036 ~ 55467613 (-)
G522748 NA non-coding downstream 10630 54566982 ~ 54628699 (-)
G522676 NA non-coding downstream 186401 54452479 ~ 54452928 (-)
G522281 NA non-coding downstream 197249 54441872 ~ 54442080 (-)
G522258 NA non-coding downstream 213153 54425969 ~ 54426176 (-)
G522174 NA non-coding downstream 281478 54357625 ~ 54357851 (-)
G522856 NA non-coding upstream 80618 54750374 ~ 54750629 (-)
G522857 NA non-coding upstream 83679 54753435 ~ 54753656 (-)
G522871 NA non-coding upstream 111082 54780838 ~ 54781049 (-)
G522872 NA non-coding upstream 111471 54781227 ~ 54781428 (-)
G522989 NA non-coding upstream 280915 54950671 ~ 54951851 (-)
G521468 NA other downstream 827291 53811713 ~ 53812038 (-)
G521418 NA other downstream 877444 53760233 ~ 53761885 (-)
G521441 NA other downstream 884791 53754049 ~ 53754538 (-)
G521438 NA other downstream 887706 53751116 ~ 53751623 (-)
G520661 LOC106587056 other downstream 1476407 53142215 ~ 53162922 (-)
G524834 NA other upstream 1298584 55968340 ~ 55969672 (-)
G525008 LOC106561927 other upstream 1497675 56167431 ~ 56302651 (-)
LOC110526187 LOC106587097 other upstream 2237818 56893209 ~ 56947117 (-)
G526016 NA other upstream 2477142 57146898 ~ 57147224 (-)
ccnd1 LOC106587137 other upstream 3285652 57955388 ~ 57962808 (-)

Expression


Co-expression Network