LOC110526214 (LOC106587124)


Basic Information

Item Value
gene id LOC110526214
gene name LOC106587124
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 57639437 ~ 57642487 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606996.2
AAAATAAGGTCACCGCCGAACCACGCTCCCCAGCAGTGGTCAGTTTATTTTCTAAAGGGGAGGGGCCATGGTTATTTTGGGTTCCGAAGCGCTTGCTTGCCATTTTGCTCTCGTTGTTCGATGAAGCAGGGAGTGACAGTCAGCAAAAATCAAAATCATGAACAATTATTCTGGGATATGCTTAGTGTTCTGTTTTGCAATATTTGGATTGGGATCTGCCATCCGCTGTGTCAAATGCAAGGATTACACAGGGAGCTGCACAAAAACACAGGACTGCAGTTATGAGGATGCCTGCCTGACACTGACTGAGAGAGGGGGACAGACGTATCGGCAGTGCGTCAAGTACTCTGACTGCGACTACAATCGACTGGCCCAGATGTTCCCAGCTGTACCAAACTTCTACTTCAACTGTTGCACCGGTGATCTATGCAACGGAGCCACATCCATTGGCACTGGCAAGCCCTTGCTGGGCCTTCTTGCCTCATTGGCAGTGATGTGGTGGTGCATGCACTAACTTCTCCTCACACTTACGCCTTAGAAGCTCTAATGCTGCCACTCGACTGAACAGAAGCCACCGATGGAACGGCAAGCAGGAAGATATGGGTTAATGGCTCATGCTGAAATTCTGCCGTATTAGTATTTGCCTGATTTACTGCTGCACATTTCTAATATTGAATTAGACTCTTTGCACTAATTTGATTTTTAAAGCTTTCTACGATAACCTATTGGATGATTACCAATGCTTTGTGCTTCAGCCCAAAGGCTGAAAATAAGAAATGTGCTCACAGCTCATGAGTTTGAAGAAGGGATATCATTCAAACAATCCTCTTTTGAGGCTAGTATAATAGACTTTGGCACTTAATTTCCATCTAAGGGGGTTTACTATAGGTTGTCTATAGTTTGCTGACCAAAGTTACCGTAATGTGCTTAAATGTAAGGGATCATTTGAGAAATGTTTGAGTTTTTGTGTGTCCGTGATTGAGTGGGCAAAGTATTGTATAATTCAAAATGCAAATACTGTGGAATTGATGATGTGGAATTTAGAACTAAAGGTTGATCCGTTTTGGAGAGATGTTTGTTCACACGCAATGCCTTCACTGCTCTTTTACTGCCTAGCGGCATACCCTGTTACATAACATTGCTTTTCCTGTTTAATAGGAATCGATTAAACCAACCAAATGTTTTTTAAAGGGCACAGTAGAGACCTTTTTGGATGAAATATTTCACGTGGGTGGTGTTGTCTTTTTATTTTAATCTCTGGCCAATAAAAAAACATATTGCCAAATAAGCCACATTTA
>TU595717
GGTCAGTTTATTTTCTAAAGGGGAGGGGCCATGGTTATTTTGGGTTCCGAAGCGCTTGCTTGCCATTTTGCTCTCGTTGTTCGATGAAGCAGGGAGTGACAGTCAGCAAAAATCAAAATCATGAACAATTATTCTGGGATATGCTTAGTGTTCTGTTTTGCAATATTTGGATTGGGATCTGCCATCCGCTGTGTCAAATGCAAGGATTACACAGGGAGCTGCACAAAAACACAGGACTGCAGTTATGAGGATGCCTGCCTGACACTGACTGAGAGAGGGGGACAGACGTATCGGCAGTGCGTCAAGTACTCTGACTGCGACTACAATCGACTGGCCCAGATGTTCCCAGCTGTACCAAACTTCTACTTCAACTGTTGCACCGGTGATCTATGCAACGGAGCCACATCCATTGGCACTGGCAAGCCCTTGCTGGGCCTTCTTGCCTCATTGGCAGTGATGTGGTGGTGCATGCACTAACTTCTCCTCACACTTACGCCTTAGAAGCTCTAATGCTGCCACTCGACTGAACAGAAGCCACCGATGGAACGGCAAGCAGGAAGATATGGGTTAATGGCTCATGCTGAAATTCTGCCGTATTAGTATTTGCCTGATTTACTGCTGCACATTTCTAATATTGAATTAGACTCTTTGCACTAATTTGATTTTTAAAGCTTTCTACGATAACCTATTGGATGATTACCAATGCTTTGTGCTTCAGCCCAAAGGCTGAAAATAAGAAATGTGCTCACAGCTCATGAGTTTGAAGAAGGGATATCATTCAAACAATCCTCTTTTGAGGCTAGTATAATAGACTTTGGCACTTAATTTCCATCTAAGGGGGTTTACTATAGGTTGTCTATAGTTTGCTGACCAAAGTTACCGTAATGTGCTTAAATGTAAGGGATCATTTGAGAAATGTTTGAGTTTTTGTGTGTCCGTGATTGAGTGGGCAAAGTATTGTATAATTCAAAATGCAAATACTGTGGAATTGATGATGTGGAATTTAGAACTAAAGGTTGATCCGTTTTGGAGAGATGTTTGTTCACACGCAATGCCTTCACTGCTCTTTTACTGCCTAGCGGCATACCCTGTTACATAACATTGCTTTTCCTGTTTAATAGGAATCGATTAAACCAACCAAATGTTTTTTAAAGGGCACAGTAGAGACCTTTTTGGATGAAATATTTCACGTGGGTGGTGTTGTCTTTTTATTTTAATCTCTGGCCAATAAAAAAACATATTGCCAAATAAGCCAC

Function

NR:

description
CD59 glycoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606996.2 False 1298 mRNA 0.42 4 57639437 57642487
TU595717 True 1256 TUCP 0.42 4 57639474 57642482

Neighbor

gene id symbol gene type direction distance location
fbxo3 fbxo3 coding upstream 4196 57621795 ~ 57635241 (+)
LOC110526205 LOC106587121 coding upstream 48098 57587593 ~ 57591339 (+)
atg13 LOC106587118 coding upstream 70964 57558525 ~ 57568473 (+)
LOC110526201 LOC106587113 coding upstream 88712 57507932 ~ 57550725 (+)
LOC110526197 LOC106587108 coding upstream 362163 57262068 ~ 57277274 (+)
aplnr2 LOC106586995 coding downstream 2180 57644667 ~ 57647053 (+)
psmc3 psmc3 coding downstream 7445 57649932 ~ 57659929 (+)
LOC110526217 hce2 coding downstream 70674 57713161 ~ 57716278 (+)
LOC110526219 LOC106587128 coding downstream 86957 57729444 ~ 57734935 (+)
LOC110526218 LOC106587128 coding downstream 101645 57744132 ~ 57760940 (+)
G525655 NA non-coding upstream 44768 57594401 ~ 57594669 (+)
G525647 NA non-coding upstream 45271 57592654 ~ 57594166 (+)
G525656 NA non-coding upstream 52121 57585518 ~ 57587316 (+)
G525654 znf408 non-coding upstream 55347 57581812 ~ 57584090 (+)
G525799 NA non-coding upstream 206885 57429603 ~ 57432552 (+)
G525897 NA non-coding downstream 39501 57681988 ~ 57682196 (+)
G525903 NA non-coding downstream 52145 57694632 ~ 57694840 (+)
G525905 NA non-coding downstream 52781 57695268 ~ 57695488 (+)
G525908 NA non-coding downstream 55963 57698450 ~ 57698764 (+)
G525969 NA non-coding downstream 168253 57810740 ~ 57810945 (+)
G525861 LOC106587122 other upstream 33070 57604108 ~ 57606367 (+)
G525645 NA other upstream 58367 57576084 ~ 57581070 (+)
LOC110526175 LOC106587084 other upstream 1518703 56020625 ~ 56120747 (+)
LOC110526169 LOC106587076 other upstream 1723491 55904064 ~ 55916081 (+)
G525912 NA other downstream 60971 57703458 ~ 57710340 (+)
G525972 NA other downstream 175337 57817824 ~ 57818280 (+)
G526547 NA other downstream 468419 58110906 ~ 58112819 (+)
G526628 LOC106587143 other downstream 629592 58272079 ~ 58272836 (+)
LOC110526933 LOC106562045 other downstream 676433 58318920 ~ 58408967 (+)

Expression


Co-expression Network