aplnr2 (LOC106586995)


Basic Information

Item Value
gene id aplnr2
gene name LOC106586995
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 57644667 ~ 57647053 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604991.2
TgagaagaggagagcaggggagtgggaggggctgagggacaGGGAGATCTACTATATCTGGAGCAGGGGGATTCACAGAGCACTAGTGAGACACACCTCCAAGCCTGGACAAAAATGACCTGAGACAAGAGTGGTTTCAGTGGAATATGGGAACAGGCTATCATCACTAAAGTCCGTTTTCAACAAGTTCAGAAGAAGAAGACCCTGATCTTCAGGTGTTGAGATGCTGTGTACAAGACTCAACACAGAAGTTGTCATAAAAGCAGAGACATTGACCTGGAAACATTGAAAACAAGAGAAAGAATATATCATTTTCTTAACCCTGCAACAAGAGACAGTGGCTGGTCATAGACTCTCACATTTATCCACTCTGCCCATCCCATTTATGTCGGAATCTGAGCTTATGCCCTCAGCATCCCCCTCTCCGCCCCCGTTTCACCAGTGTGACTACAGAGAATGGAGACCCACATGGGTTATCATACCCTCAGTCTATCTCCTGGTATTTGTTTTGGGCTCCCTGGGAAATGGGCTTGTCCTCTGGTCATACCTGGATCGACCTGAGGGTAAACCAGCCGGCGTGGGGACCTGCACCAATCGGCGTCTTCAGCAATCTGGAAGGAGTTCTACCCCCAAGTTGTCTGACTCCTCCCGTTCCCTTACTGACTCACTCATTGCCAGCCTGGCAGCAGCAGACCTGGCTTTTGTGGTAACCCTGCCCTTGTGGGCAGCCCACACAGCGCTAGACTACCACTGGCCCTTTGGCAAGCCTCTTTGCCAAGTCAGCAGCTATTTAGTGGCCCTCAACATGTATGCTAGTGTGTTCTCCCTTACGGTCCTGAGCATGGAGCGTTACTGGGTTATTGCTGGCCGACGGCGGTCCAGTAGGGCCCAGGGGAGTGGAGCCTGCCGAGCTGCTTGGGTAGTGGGGAGCGTTTGGGTGGTGGCAGGTATCCTTGCTCTTCCTGCGCTGCTACTGAGGACTGTAAGGGAGGTGGATGTAGGGGGTCAGTATGAAGAAGACTGGCAGACAGCTGAGGAAGAGGAACCCTCGGATCATGATCACATGCCCATGTTCATATCTTCCTGTATGATGGACTACTCTGGTCTGATCTCAGCAGAGCTGGAGGAAGATGACAGGGAGCAGGCAGAGCTACTGTGGACGGCGGCTCTAGGACTTAAATCCACCTTGGTTGGCTTTCTGTTGCCTCTGATCATCTTATTGATATGTTACTGCTCCCTAGGCCGCCTCCTCAGCCGCCATTTTGGACAGGGCCCACGCCCCGACCGCCGACGCCAACGCCGCCTTTTGCGAGTTATAGTCACCTTAGTGCTAGCCTTCTTCCTCTGCTGGCTTCCCTTTCATGCCAACAAAACACTTTCCATGCTCGTGGATTTAGAGCTGCTGCCCTACTCCTGCCCATTTGACCGGACTCTGGTTGCGGCTCACCCCTATGCTACCTGTCTAGGGTATGTCAATAGTTGCCTCAACCCCCTTCTATATGCTTGTTGTGATGTGGCCTTTCGGAAGCGCTGCCGGGCCTTACTGCAGTGGTTGTGGTGCAGGGGTAGGTGTGGGAGTCCAATGACAGTAAATGATGATGACAATAGGGAACAAGCCAGCCGGAGTTCTGCAATTCCTTCTGGAACACGCAAGGAAACAGGAGATGGAATTGAGGGGAAGGATGACGTGAGGCATGGCAGAGACTGAGAGGAGGGTAGGAGTGCTGTGGAACCTCAGTCAGAAGAGGACACCAATAAACAGAGACGGATATCCTGGGAAATGTGCAACCCTTACTGTATTCACGTAACCCCTCAGGAGATACATAAACTCAATAAATTCCACTGGGAATGTGTTTGATCGAAAAACTGTCATTTCTTCCAAGGAGATAGAAAGGAGACCTTCTAGAAAGACACTGGCAATAAAGAAAATGTATATTATGTGCTACCAAGCCAACAGATGGGTtttctgtatatattttttgatatacagtaccagtcaaaagtttggacacacctacccattcagtACTATAGCTGCATAAGAATAAGTATGAAATACACATTACAATTGAATACTAAGAATTGTGAATGTAGTAtccctttttttctaagtgtagtGCAATAAAATTAATGCTTCTCTGTTAAGGACAG

Function

NR:

description
apelin receptor B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604991.2 True 2151 mRNA 0.50 2 57644667 57647053

Neighbor

gene id symbol gene type direction distance location
LOC110526214 LOC106587124 coding upstream 2180 57639437 ~ 57642487 (+)
fbxo3 fbxo3 coding upstream 9426 57621795 ~ 57635241 (+)
LOC110526205 LOC106587121 coding upstream 53328 57587593 ~ 57591339 (+)
atg13 LOC106587118 coding upstream 76194 57558525 ~ 57568473 (+)
LOC110526201 LOC106587113 coding upstream 93942 57507932 ~ 57550725 (+)
psmc3 psmc3 coding downstream 2879 57649932 ~ 57659929 (+)
LOC110526217 hce2 coding downstream 66108 57713161 ~ 57716278 (+)
LOC110526219 LOC106587128 coding downstream 82391 57729444 ~ 57734935 (+)
LOC110526218 LOC106587128 coding downstream 97079 57744132 ~ 57760940 (+)
LOC110526223 LOC106561972 coding downstream 195941 57842994 ~ 57863756 (+)
G525655 NA non-coding upstream 49998 57594401 ~ 57594669 (+)
G525647 NA non-coding upstream 50501 57592654 ~ 57594166 (+)
G525656 NA non-coding upstream 57351 57585518 ~ 57587316 (+)
G525654 znf408 non-coding upstream 60577 57581812 ~ 57584090 (+)
G525799 NA non-coding upstream 212115 57429603 ~ 57432552 (+)
G525897 NA non-coding downstream 34935 57681988 ~ 57682196 (+)
G525903 NA non-coding downstream 47579 57694632 ~ 57694840 (+)
G525905 NA non-coding downstream 48215 57695268 ~ 57695488 (+)
G525908 NA non-coding downstream 51397 57698450 ~ 57698764 (+)
G525969 NA non-coding downstream 163687 57810740 ~ 57810945 (+)
G525861 LOC106587122 other upstream 38300 57604108 ~ 57606367 (+)
G525645 NA other upstream 63597 57576084 ~ 57581070 (+)
LOC110526175 LOC106587084 other upstream 1523933 56020625 ~ 56120747 (+)
G525912 NA other downstream 56405 57703458 ~ 57710340 (+)
G525972 NA other downstream 170771 57817824 ~ 57818280 (+)
G526547 NA other downstream 463853 58110906 ~ 58112819 (+)
G526628 LOC106587143 other downstream 625026 58272079 ~ 58272836 (+)
LOC110526933 LOC106562045 other downstream 671867 58318920 ~ 58408967 (+)

Expression


Co-expression Network