LOC110526217 (hce2)


Basic Information

Item Value
gene id LOC110526217
gene name hce2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 57713161 ~ 57716278 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607001.2
TCTATCACGTTCACAACAGACTGATCCTAGGCATCCTGCAGTCATTTACCATGGCACCCGTCTTTGTGCTGACCATTTTCATCGCTGTTCTCTGCTCAGTTCAGGGCCGATCTACAGGGAAAGCTTCATTTGAAAGGAGTGAAGAGGACATGGAACTTGACAGAACCAGCACGAACAGCGTTGAGGAGGAGGATTTTTCTGCTTCAACGCTCATTGAGAAGGCCAACAGAAACCTTGGGGAAAGACTTGGCGAGACACGAGTCATTTTTGGGGACATTGCAGTAAATACTGGGTTGATTAACGCTGACCCCTGCACAGCTCGCACCTGCAAATGGCTGAAGTCCTCTGATGGGAACGTTTACGTGCCCTATGTGATCTCTAACCCATACtCGGACCGGGAGAGGTCCGTTATTGAAGGTGGGCTGCAAACCATTTCTGCATCAACCTGCGTCCGATTCCTTCCCCGAACCAATCAGAAGGACTTTGTGGACATCCAGTCTCAGGCAGGCTGTTTCTCGTATATTGGACGCCAGCGAAATGGCCAGGTGGTGTCTCTGCATAGGAACGGATGtgtccatctgtctgtggtgCAGCATGAACTGCTGCACGCCTTGGGCCTCAACCACGAGCATTCGCGCAGTGACGGTGACAGCCATGTTCAAACCCTGACTCGGAACATTTTGCCTGGAATGGAATACAATGTCGAAAAGATCAACACGATAAACTTGGGGACTCCATATGACTATAATTCTGTCATGCAATACTCAAGGTTTGCCTTCTCCAGGAACGAACAGCCCGCCATTCTTCCAATCCCTGACAATAATGCAGTTATTGGCGGGGCAACTCAGATGAGCCCCATTGATATTCTGCGGATCAATCGTCTCTACAACTGCAGAAAGCAGATGAACTGATTTGAGAAGTGCGATGGATCACACTCAATGAATTGAGATGCAGATAACCATTTGTTTTGTTCAAGTCTATCTTTACGTCCTTGTATCAGATCTGTTATGGCTTATCATTGATAGAACATTGGTGTGGCAaagtactgtagtctactgaaaCATTATCACAATAAACATGTGTAGCAACGTGTA

Function

NR:

description
low choriolytic enzyme-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607001.2 True 1094 mRNA 0.47 9 57713161 57716278

Neighbor

gene id symbol gene type direction distance location
psmc3 psmc3 coding upstream 53232 57649932 ~ 57659929 (+)
aplnr2 LOC106586995 coding upstream 66108 57644667 ~ 57647053 (+)
LOC110526214 LOC106587124 coding upstream 70674 57639437 ~ 57642487 (+)
fbxo3 fbxo3 coding upstream 77920 57621795 ~ 57635241 (+)
LOC110526205 LOC106587121 coding upstream 121822 57587593 ~ 57591339 (+)
LOC110526219 LOC106587128 coding downstream 13166 57729444 ~ 57734935 (+)
LOC110526218 LOC106587128 coding downstream 27854 57744132 ~ 57760940 (+)
LOC110526223 LOC106561972 coding downstream 126716 57842994 ~ 57863756 (+)
fgf3 LOC106587135 coding downstream 200067 57916345 ~ 57921070 (+)
LOC110526226 LOC106587136 coding downstream 212500 57928778 ~ 57936266 (+)
G525908 NA non-coding upstream 14397 57698450 ~ 57698764 (+)
G525905 NA non-coding upstream 17673 57695268 ~ 57695488 (+)
G525903 NA non-coding upstream 18321 57694632 ~ 57694840 (+)
G525897 NA non-coding upstream 30965 57681988 ~ 57682196 (+)
G525655 NA non-coding upstream 118492 57594401 ~ 57594669 (+)
G525969 NA non-coding downstream 94462 57810740 ~ 57810945 (+)
G526375 NA non-coding downstream 114263 57830541 ~ 57830787 (+)
G526386 NA non-coding downstream 124233 57840511 ~ 57840853 (+)
G526395 NA non-coding downstream 134715 57850993 ~ 57851197 (+)
G526411 NA non-coding downstream 153222 57869500 ~ 57869702 (+)
G525912 NA other upstream 2821 57703458 ~ 57710340 (+)
G525861 LOC106587122 other upstream 106794 57604108 ~ 57606367 (+)
G525645 NA other upstream 132091 57576084 ~ 57581070 (+)
G525972 NA other downstream 101546 57817824 ~ 57818280 (+)
G526547 NA other downstream 394628 58110906 ~ 58112819 (+)
G526628 LOC106587143 other downstream 555801 58272079 ~ 58272836 (+)
LOC110526933 LOC106562045 other downstream 602642 58318920 ~ 58408967 (+)
G527450 NA other downstream 1062445 58778723 ~ 58779017 (+)

Expression


Co-expression Network