LOC110526233 (LOC106587142)


Basic Information

Item Value
gene id LOC110526233
gene name LOC106587142
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 58228407 ~ 58236139 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036980586.1
TCAAGGCACAGTTGGAAATACAAATGGGATGGGAGTTTACTCTGTCCAATGATGTGTTTATCTCTACAAAGCACACAGTGGTTTCACAGATCATTTGCTCACCCCACAAGGACATCAAATCCACAATGTTTCCTCTGCGTCTACTTCTACTGATATCTGGAACACTGGCTATGAATTGCTCAAATTCAGATGATACCTTTTATTTTAACACCACAACTGGGGAGATTTCAATGACAATAAACCTGCCGAACAAGACTATCACCATCAACGATAAAGCCGATGACGATCTGAAATGCTTTTGGTTCATTGAAAGCTATGTTGAGTGCACCTCAATGAACTTGACCTCTATTAACCTCACGGAGTGTCAGACGGCGCAGATTTCTGTCGTCCAGAACTCAACCAGCAAGTTGATCTTCAACATATCTTCCTCCATGTGTGAGGTCACCAAGTGTACTGGGACAGCAATCACTGCCCTGATGAGAGAGATACAAGACCATCCCAGTGAGGGTCCAAAGGATCTTAAAAGGGTCCTGAACATGCGAAATATGTGTGCAGACCTGTTCAAAAACGATTGGACCATGAGGATGATGTTTATTGGCGTTGAACGGGGCCTGATACACAACATGATGAACATCTCAATCACCGGAGAGCCTGTGTACTACAACCTCAGGAATCTGGCTCTGACTGTGTTTAACCTGACCAACCTAACCAGTGCGGATGACAAGATGGTGAAAATAAAAGCCCCAGAGCTCCTCCCTGAGAACAACTCTTACATTCCGGAAACATGGATCCCTATTGACGCACTCCAGAACATCCCGGAGGAAAATAGGAGAGTGGGCGTGGTCACCTATAAATCACCCAATCAGTTCTTGTTTAAAGAGGAACTCGTGAGAACCATGGCCATACGGATAGAGGTGGATGGCGGCAGACAACTTCAGAACTTGATCACTCCACTCAAGATGAAGTTCAAATTGCTTGACCTTATAATACCAGTGAATTACAGCCTGTCGTGTCAATATTTCAATGAATATGGGAACATAAACCTCCCAGACACTGTCTTTTGGAAAACGGATGGATGCGTTACTAAGATCAACGACAGCGTGGTGGAGTGCATCTGTAACCACGCTACGCCGTTCGCCGTGCTGCTGATCGCCGACCTATCTATTGACGGTGTGCACTGGCAGGTCTTGTCTTACATCAGCTACATTGGCTGTGGCTTGTCGGCCTTCTTCACTGCCATATCCTTCCTCACCTACGTCATCACCACGAACTCCAGGGCGGACAACGCCAACAGCATCCACGTGTCACTGAGCGGGGCTTTGTTCCTGCTCAACACCTCGTTCCTGCTCAACGAGTGGGGGGCCAGTCTGGGCATCAGGGGCGTGTGTGTCTTCATTGCGGCGGCCATTCACTACAGCCTCCTCAGCTGTTTCACCTGGATGGCCATTGAAGCTGTCCACCTGTATCTCCTCCTGGTCAAGGTGTTCAACACCTACTACCGACACTACATGGCCAAGCTGTCTGCCATTGGCTGGGGACTCCCTGGTATCGTTGTGGGAGTTTCATTGGCGGTCAAGGATATCAAACCGCTATATGGACCTACAGAAATGACTATGGCAGACACTAACCGGACAAATACAATCTGCTGGATCACGGACATCCCCTTCTTCTACAGTATGAACCTGGCCTACTTCACCATCATCTTTGTCCTTAACTCTGGCATTCTGTTAACGGTGACCACCCGGATCTGCCAGCTGCAGCGCTATGGCAGTAAGGGCAAGCCTGGGAAGGCAAGCCTGGCCTGGAAGGACATCGGCACCGTCCTGGGTCTGACCTGCCTGCTGGGCATCACCTGGGGCCTGGCCTTCCTCAGCTACGGCTATGTCAACCTTCCCATCCTCTACCTGTTCAGcattttcaactccctccaagGATTCTTTATATTCCTATGGATCTGTGGCACTGCCAGGAAAGACAGGGAGCGGGCGGCGAATACCAAGAGCACATCAGCAGCTCTGAACACCTCTACAGCCAAACCCAAGGAGGAGATGTTCCCTGGCAACAACCCCTACCAGTAAACAATGTCTGTCCACAATGGAGATCACCCATATCTTCTTAGATGGCAAGGGGAGTTTTGGCTTTTGTGTCTAATGGCATATGcattgtctctttctttctctttcaaatTGAGTTATGGTTTCTACACCGGTTGTGTGCGTGTGAGTacatgtgctgtgtgttttgggcttttgTGGCCTTGTGGATGGAGCAGATGactacgggtctcgtcccgtgtgttaatcatcatgcgcgtgtgttatttattcaaggtactcctcgttcttttgtttgggtttcaaccctgtgtctttgttacgtgtttgtttggtcttcgtccccgtgcctttacacggcacgccgtaatttggggctgaataaaaaaaactattacgcattcctgcgcctgtctcccgaatccATTTATACCAACGTGACATGCATTTTCTTCTGTATCATTCCAATGTATTTATTGGGAAAGTGCTTTGAGGGAATCATTTTACTTGAAGTGTACGTTGTTTATGATTATCAACCTTCATTAAATATCCGATCTCAAGTTGCGGAACTGACTGGTGCATAATTAGTCAGGGGCAAACCAAAGGATTTAGTTTCCTGCATACCATTTAGTTTCCTGCATATCATTTAGTTTCCTGCATACCATTTAGTTTCCTGCATACCATTTAGTTTCCTGCATAAACCTTTTCACACCGCCTCATCATTATTAGTTTCACAATCAATCACTTGATTTTCTAACTCAACTATGTAAAGTGTGTTGCAATCTGGTAATGTTTTCTACATTTGAACTAATATCACTTCTGCAGAAAGTGTCTCACTGGGAGCACTAGGTTCTCAAATGCACACACGATTTTCCATTTGCATATGATTGTGAAACAGAGACATCCTCTTTTCTAGCAATTTTCTGGTGAGTGTCAGAATGAGTCTTAGAGATGCTGAGAAATGCCACCATATACGGcactgtagcctagtggttagagcattggactagtaactgaaaggttgcaagttcaaatccccgagctgacaaggtgcaaatctgtcgttctgcccctgaacaggcagttaacccactgttcctaggctgtcattgaaaataagaatttgttcttaactgacttgcctagttaaataaaggtaaaaaaaagcattttttttgttgatgaTTCTCACTGAAATGTTTTGATTATATTGATTTACCTAACATtaaccacccccccacccccacccaaaGGACTACAAAGGACAAAAGCTTTCAAGCTTTGTATCTGGAGACGTCTTATGAACAGTATGTTTTTTAACATTTATATTGTCTAATAAATATAAGTGTTGTATTCATTACATGCTGTGTCTACAATAGCCTACTTTTATTCACCCAGTTTTGTAATGCCATAGCCTACAGTATACTCAATTAACTTCCTGCACATTATTGTGTTATTCTTGATGATTTTTCTTAAATTGTATCTGGAGACGTCTTATGAACAGTATGTTTTTTAACATTTATATTGTCTAATAAATATAAGTGTTGTATTCATTACATGCTGTGTCTACAATAG

Function

NR:

description
adhesion G-protein coupled receptor G2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036980586.1 True 3629 mRNA 0.45 14 58228407 58236139

Neighbor

gene id symbol gene type direction distance location
LOC110526232 dhcr7 coding upstream 69825 58151840 ~ 58158582 (+)
fgf19 LOC106586997 coding upstream 284723 57941240 ~ 57943684 (+)
LOC110526226 LOC106587136 coding upstream 292141 57928778 ~ 57936266 (+)
fgf3 LOC106587135 coding upstream 307337 57916345 ~ 57921070 (+)
LOC110526223 LOC106561972 coding upstream 364651 57842994 ~ 57863756 (+)
LOC110526235 LOC106586999 coding downstream 121 58236260 ~ 58243577 (+)
LOC110526238 LOC106587144 coding downstream 24364 58260503 ~ 58263649 (+)
LOC110526933 LOC106562045 coding downstream 108006 58318920 ~ 58408967 (+)
LOC110526241 LOC106587148 coding downstream 218309 58454448 ~ 58505295 (+)
LOC110526245 LOC106587150 coding downstream 404515 58640654 ~ 58732690 (+)
LOC110526234 LOC106587141 non-coding upstream 8814 58218513 ~ 58228939 (+)
G526609 NA non-coding upstream 17073 58211120 ~ 58211334 (+)
G526608 NA non-coding upstream 17603 58210523 ~ 58210804 (+)
G526607 NA non-coding upstream 18103 58210003 ~ 58210304 (+)
G526606 NA non-coding upstream 18891 58209284 ~ 58209516 (+)
G526511 NA non-coding downstream 12914 58249053 ~ 58256834 (+)
G526624 NA non-coding downstream 31129 58267268 ~ 58267483 (+)
G526625 NA non-coding downstream 31529 58267668 ~ 58267950 (+)
G526627 NA non-coding downstream 34490 58270629 ~ 58271477 (+)
G526639 NA non-coding downstream 49237 58285376 ~ 58285687 (+)
G526547 NA other upstream 115588 58110906 ~ 58112819 (+)
G525972 NA other upstream 410127 57817824 ~ 57818280 (+)
G525912 NA other upstream 518067 57703458 ~ 57710340 (+)
LOC110526214 LOC106587124 other upstream 585925 57639437 ~ 57642487 (+)
fbxo3 fbxo3 other upstream 600788 57621795 ~ 57635241 (+)
G526628 LOC106587143 other downstream 35940 58272079 ~ 58272836 (+)
G527450 NA other downstream 542584 58778723 ~ 58779017 (+)
G528653 NA other downstream 1535569 59771708 ~ 59772084 (+)
LOC110526282 LOC106561985 other downstream 3735597 61971487 ~ 61979527 (+)

Expression


Co-expression Network