LOC110526235 (LOC106586999)


Basic Information

Item Value
gene id LOC110526235
gene name LOC106586999
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 58236260 ~ 58243577 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607030.2
CAACAACACACGAGCAAAGATCAACTAACAAGACAGACCATTTGCCCATCAGCGGTCACAgactgaaagagggagagagtgatgaagACCAGTTATTTATTTATAATATTTATATGCATCCCTGCAACCCTGAGAACCAATGACAATCTTCCAAACTGTAAAGATGCTCTTCGAGATTGTCTTCGCACCGAAGTGGTGTGGACCAGGTGTTACGAGGATAGAATTGCAATATGCATTCCAATGACCAGAATGGCCAtcccaaacttctacagatggtCTGTCAACTCATCCAATCAGGCAGAAGAGAGCACGAATTCTGGACACAGAGTGCACATTCCTGCACATGCTCTCCAGAGAAGCAAGAGGAACGACTCTATTAGCACTGACTATGTGCAAATTACAATGGCTGTACTCAACAGCTCTCTATTCAAGCTTAGCCCGGTTCAAGGCTCTAGATCAGGGGAAGTCCTTGGGCAGTCTGTGCTGGCTGTGAGGGTGGGGGACCACAGTGTGAGTGACCTTGACCAGCCTGTCAGAATCGccttcagaaacacaaatgtGACTGAGAGAGGGACTTGTGTTTTCTGGAAGGACTCAGAAAATAAGAATGGCGAAGGGGACTGGAGCTCAGAGGGTTGTATTACCACCCTCATTCACGGAGAGTTTGTGTGCAGCTGTAACCATCTCAGCTTCTTTGCAGTGCTTGTGAACTCAAATTTGTCGGTAGACCCTGTGAATGCTGCCAACCTCGGCTACATCTCCTACATTGGTTCATCATTCTCTGTGGTTTTCACCACAGTAACCCTTGTCATGTACACTTGTCTTAGGAAGGGGCATTCTGAACAGTCAATATCCATTCATGTGCAGCTGACAGGAGCGCTCCTGTTTCTACACCTCTCCTACCTCTTGAGCGAGTGGTGGGTGTGGCATGAGGCTGATGGGGCTGAGGGACATGTCTGTCTGGCCTTTGGGTTGATACTGCACTGGGCTCTCCTGTCCACCTTCACCTGGCTGGCCATTGAAGGCTTCCATCTCTACATGCTGTTAGTCCGCGTCTTCAACATCTATGTCAGGAAATACCTGCTCAAACTGAGCCTGGTTGGATGGGGCATACCCACTGCAACTGTGATGGCCTGTCGTTTCTCAGGAGTCTACGGCATACATAGCTTCTACATGACGGGGGCCAATAACGGCTCATCAACAGACATATGTTGGATAAGCAGTGCAACAGACAGCcctggagtcgtggtcagctacATCACAGTGAGTGGATACCTGGGCCTGGTCTTCCTCTTCAACACAGCCATTCTaagtgtggtggtggtgaagcTGTGGGGGCAGAGAGGGAAGGGTAGGATGTGGAAGGACTGGGCCACGGTCCTGGGGCTCAGCTGTGTGCTAGGAGTACCATGGGGGTTGGCATTCTGCACCTACggccccctttctctccctggaCTGTACCTCTTCAGTATATTCAACTGCTTCCAGGGTGTCTTCTTGTTCCTGTGGTTTCTTGCCCTTTCACGTAAGGGCCGCCCAGAGCACTCCTCTGTGAAAGACTCTTCCAGTCAAAAGATGATGGAGACAAACTTCAACTGATACTGTGGGACTTGCAACACATTCCAGCATACCTTTTAATAGTGTTTGCAGACCAAGTCCTGAGTATGAAACAGCGGGGAAAGTATAATTCATTTCTTCCTGGTACGGACCTCTTTTCCGGAAAAAAATGTATGGGCCTAAATATAGAATTGCATATAGAATCCCTATCAATTCAATAGCATTTATCTGGGCCTAGTGGTAAAGATTTGACatgaaacatttcaaatgtatgACCTTTTATTATGGCATCAACAAAACATCATCATGATGTTTTAATCAGCTTGTCAAACATCGGCCCCTTTACTAGGCTACCCGAGCAACGTTTATCCACTCACAACATACTTCCAGCCCCCAAACAATggtgaattgagagagacagctgttacacaaaacaccaaaaagtgtcATGACATTTGGCGTTTGTATTTAGGCCAGAATATATGCGTCCACTGCTGTCTGCGTGCGTCTTGGTGTCGGCCACTCATCTCTGCCGTGGCATAATTTCAGTGTTTTTGCATGACATTTTGGAGCATAGGCACCACCTGTTTTCATGTCCATTTGCAAAATGTTCATGCCTCTGCCAAGCGGtaataataaaaaacatttaaaatttCAATTATTGTGATATATTGTATTTTACCAGTACAGCAAACCCTCGCTATTTATTTTGTGGGGACACCGTACCAGACCGTACCAACTTTCAACTTTCACCCCTGGTGTAAACATGACATTTATGATAAAGTGTGACACATGGAGC
>XM_021607031.2
CAACAACACACGAGCAAAGATCAACTAACAAGACAGACCATTTGCCCATCAGCGGTCACAgactgaaagagggagagagtgatgaagACCAGTTATTTATTTATAATATTTATATGCATCCCTGCAACCCTGAGAACCAATGACAATCTTCCAAACTGTAAAGATGCTCTTCGAGATTGTCTTCGCACCGAAGTGGTGTGGACCAGGTGTTACGAGGATAGAATTGCAATATGCATTCCAATGACCAGAATGGCCAtcccaaacttctacagatggtCTGTCAACTCATCCAATCAGGCAGAAGAGAGCACGAATTCTGGACACAGAGTGCACATTCCTGCACATGCTCTCCAGAGAAGCAAGAGGAACGACTCTATTAGCACTGACTATGTGCAAATTACAATGGCTGTACTCAACAGCTCTCTATTCAAGACTGAGAGAGGGACTTGTGTTTTCTGGAAGGACTCAGAAAATAAGAATGGCGAAGGGGACTGGAGCTCAGAGGGTTGTATTACCACCCTCATTCACGGAGAGTTTGTGTGCAGCTGTAACCATCTCAGCTTCTTTGCAGTGCTTGTGAACTCAAATTTGTCGGTAGACCCTGTGAATGCTGCCAACCTCGGCTACATCTCCTACATTGGTTCATCATTCTCTGTGGTTTTCACCACAGTAACCCTTGTCATGTACACTTGTCTTAGGAAGGGGCATTCTGAACAGTCAATATCCATTCATGTGCAGCTGACAGGAGCGCTCCTGTTTCTACACCTCTCCTACCTCTTGAGCGAGTGGTGGGTGTGGCATGAGGCTGATGGGGCTGAGGGACATGTCTGTCTGGCCTTTGGGTTGATACTGCACTGGGCTCTCCTGTCCACCTTCACCTGGCTGGCCATTGAAGGCTTCCATCTCTACATGCTGTTAGTCCGCGTCTTCAACATCTATGTCAGGAAATACCTGCTCAAACTGAGCCTGGTTGGATGGGGCATACCCACTGCAACTGTGATGGCCTGTCGTTTCTCAGGAGTCTACGGCATACATAGCTTCTACATGACGGGGGCCAATAACGGCTCATCAACAGACATATGTTGGATAAGCAGTGCAACAGACAGCcctggagtcgtggtcagctacATCACAGTGAGTGGATACCTGGGCCTGGTCTTCCTCTTCAACACAGCCATTCTaagtgtggtggtggtgaagcTGTGGGGGCAGAGAGGGAAGGGTAGGATGTGGAAGGACTGGGCCACGGTCCTGGGGCTCAGCTGTGTGCTAGGAGTACCATGGGGGTTGGCATTCTGCACCTACggccccctttctctccctggaCTGTACCTCTTCAGTATATTCAACTGCTTCCAGGGTGTCTTCTTGTTCCTGTGGTTTCTTGCCCTTTCACGTAAGGGCCGCCCAGAGCACTCCTCTGTGAAAGACTCTTCCAGTCAAAAGATGATGGAGACAAACTTCAACTGATACTGTGGGACTTGCAACACATTCCAGCATACCTTTTAATAGTGTTTGCAGACCAAGTCCTGAGTATGAAACAGCGGGGAAAGTATAATTCATTTCTTCCTGGTACGGACCTCTTTTCCGGAAAAAAATGTATGGGCCTAAATATAGAATTGCATATAGAATCCCTATCAATTCAATAGCATTTATCTGGGCCTAGTGGTAAAGATTTGACatgaaacatttcaaatgtatgACCTTTTATTATGGCATCAACAAAACATCATCATGATGTTTTAATCAGCTTGTCAAACATCGGCCCCTTTACTAGGCTACCCGAGCAACGTTTATCCACTCACAACATACTTCCAGCCCCCAAACAATggtgaattgagagagacagctgttacacaaaacaccaaaaagtgtcATGACATTTGGCGTTTGTATTTAGGCCAGAATATATGCGTCCACTGCTGTCTGCGTGCGTCTTGGTGTCGGCCACTCATCTCTGCCGTGGCATAATTTCAGTGTTTTTGCATGACATTTTGGAGCATAGGCACCACCTGTTTTCATGTCCATTTGCAAAATGTTCATGCCTCTGCCAAGCGGtaataataaaaaacatttaaaatttCAATTATTGTGATATATTGTATTTTACCAGTACAGCAAACCCTCGCTATTTATTTTGTGGGGACACCGTACCAGACCGTACCAACTTTCAACTTTCACCCCTGGTGTAAACATGACATTTATGATAAAGTGTGACACATGGAGCA

Function

NR:

description
adhesion G protein-coupled receptor G3-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607030.2 False 2356 mRNA 0.47 12 58236260 58243576
XM_021607031.2 True 2228 mRNA 0.46 11 58236260 58243577

Neighbor

gene id symbol gene type direction distance location
LOC110526233 LOC106587142 coding upstream 121 58228407 ~ 58236139 (+)
LOC110526234 LOC106587141 coding upstream 7321 58218513 ~ 58228939 (+)
LOC110526232 dhcr7 coding upstream 77678 58151840 ~ 58158582 (+)
fgf19 LOC106586997 coding upstream 292576 57941240 ~ 57943684 (+)
LOC110526226 LOC106587136 coding upstream 299994 57928778 ~ 57936266 (+)
LOC110526238 LOC106587144 coding downstream 16926 58260503 ~ 58263649 (+)
LOC110526933 LOC106562045 coding downstream 100568 58318920 ~ 58408967 (+)
LOC110526241 LOC106587148 coding downstream 210871 58454448 ~ 58505295 (+)
LOC110526245 LOC106587150 coding downstream 397077 58640654 ~ 58732690 (+)
LOC110526935 LOC106562040 coding downstream 570906 58814483 ~ 59000538 (+)
G526609 NA non-coding upstream 24926 58211120 ~ 58211334 (+)
G526608 NA non-coding upstream 25456 58210523 ~ 58210804 (+)
G526607 NA non-coding upstream 25956 58210003 ~ 58210304 (+)
G526606 NA non-coding upstream 26744 58209284 ~ 58209516 (+)
G526511 NA non-coding downstream 5476 58249053 ~ 58256834 (+)
G526624 NA non-coding downstream 23691 58267268 ~ 58267483 (+)
G526625 NA non-coding downstream 24091 58267668 ~ 58267950 (+)
G526627 NA non-coding downstream 27052 58270629 ~ 58271477 (+)
G526639 NA non-coding downstream 41799 58285376 ~ 58285687 (+)
G526547 NA other upstream 123441 58110906 ~ 58112819 (+)
G525972 NA other upstream 417980 57817824 ~ 57818280 (+)
G525912 NA other upstream 525920 57703458 ~ 57710340 (+)
LOC110526214 LOC106587124 other upstream 593778 57639437 ~ 57642487 (+)
fbxo3 fbxo3 other upstream 608641 57621795 ~ 57635241 (+)
G526628 LOC106587143 other downstream 28502 58272079 ~ 58272836 (+)
G527450 NA other downstream 535146 58778723 ~ 58779017 (+)
G528653 NA other downstream 1528131 59771708 ~ 59772084 (+)
LOC110526282 LOC106561985 other downstream 3728159 61971487 ~ 61979527 (+)

Expression


Co-expression Network