LOC110526241 (LOC106587148)


Basic Information

Item Value
gene id LOC110526241
gene name LOC106587148
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 58454448 ~ 58505295 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036980596.1
ATCCGCTCCGTACAGCCCTATACAGTCATTGGTACAGCTCTGAGCAGCGCCAGCCGGACTGGACAGAAGAGATCGCCGCCAGTTCTCCGTGAAGAGCGAATCACCTCGGCGCGTTCGTCACAAATAAAACCACACAGCCAGAAGGCAGCCTATTCTACGTCGATTCATGGAATTATTGTCAGGTGGCGTAGGTTGCATTTATTACCAATTCAGTTCGATAGTTGTGGCTTCTACCCATCCTGCCTGAAGGTCACAAGCGGAGCCGCTCAGCACCGACCGCCGCGCCCCTTCAGGACTTCGTCACCCAGGGACTGCAACGAAAGGACGATGGGGGACAACGAGCTGAAATAGAGGAGTGAGCGCAGTCTGAGGGCAACAGGATCTGAAAAGGAAGATTTGGCTGATATAGAGGAGGGAGAAGGTAACCCCAGGACttaagagggaaagaggaggggagggaggggggttagGTGCAGAGCTGGACTGGAGGACAGAAGGACTGGATGCTAGCCTCAATAGGCCCCAGCAGGTCCCAGCTCCCACAGAGATGGCCTCCAACTTCAACGACATCGTCAAGCAGGGATACGTCCGCATGCGTAGCAGGAAACTGGGGATTTACCGTCGCTGCTGGCTGGTGTTTAAGAAGTCGTCCAGTAAAGGACCACGCAGACTGGAGAAGTACACTGATGAGAAGTCCGCTTACATCAGAGTCTGTCCTAagGTGACAGAGATCAGCAATGTGAAGAATGTCACAAGGCTCCCAAGGGACACCAAGCGCCAGGCGGTAGCCATCGTCTTTACCGATGACACCTCACGCACGTTCACCTGTGAATCAGAGCTAGAAGCAGAGGAGTGGTTCAAAACTCTGTCAATCGAATGCCTGGGGACCCGCCTCAATGACATCAGTCTAGGAGAGCCGGACTTGCTGGCAGCAGGTGTTCAGTGTGAACATACAGAGCGTTTCAATGTGTTCCTACTGCCCTGTCCTAACCTGGACATCTATGGGGAGTGTATGATGCAGATCACCCATGAGAATATCTACCTGTGGGACATCCACAACCCTCGCACCAAACTGGTTACCTGGCCTCTCTGCTCCCTGCGCCGCTACGGACGAGATGCCACGCGCTTCACCTTCGAGGCTGGACGGATGTGTGACAGTGGAGAAGGCCTGTACACATTCCAGACGCGGGAGGGAGAACAGATCTACCAGAGAGTCCACTCCTCCACCCTGGCCATCGCTGAGCAGCACAAGAGAGTTCTGATGGAGATGGAGAAGAACAGCAGAtTGTCTAAAGGTTCTGAGGCGAGCTCCTACCCCTGTACCCCCACAGCCATCCTGCCCCGCAGTGCCTTCTGGCACCATATCACTGGCACCCAGGGGGGCATGGACCCAGCCCATGgtgACATGTTTGGTGGTTCTCAGACTGGCGCTGATGCAGACCTGCTCTCCACCCGGCTGCCCTCAGAGCCACGCCACGCTACCATGCCCCTGGCACACAGCCGACACTCCCCCGCCCGCTACCCCACCTACCCCAGCCAGTGATCCCAGGGGTGCATTGCAGACCCCTAGCCTCCTCCACTCTATACACCGCACTCCTCCTATTCTCCTTTCTCTGCAGTGCTTACCTCAACTCCACGCCCCCTCATCTACCCTCCAGCCAATCAGGTTGGGTTGTGGGGAGTGGGCTCTAAGATGGGGTCATAGGACCTCCCCTAAAGCTGGGAGCTCTGTGAAGCAGGACGTGACAGCGCCTCTGgtcttctcttcttcttccaaAGGCTGGTTACCTGAAGGAACTTCAACTCACGGTGGGGGCAAAGTGCATTGTGCGAGCCAGCAGTGGCTTGTTGCCTCTTAGTGAGCTGACATTGTGGCATGGTGCATCTCTCTTTGCTCTGCTGTGGGTgtggaggaggaacaggaggagaatGGGTGTGAGCTGTAAGGATGTGATTTagtctcctctctaacccctgtgAAATCTTATTTTCTGATGGGATTCAGTCAGCTCTCCATCATCTCAACCCCCTTTGCGACAGACCTCTTCATGTACCTcatgccagctcttagcaaagtTCAATGTTAGGGGCTCAGGACGTCCCCATACAGCTCTTATTGGGGGCAGAACAGTAGGACCCCTTCCTACCATCCCTGCTCTCCAGCATGATAAGGATTGTGGCGCTCGCTCCAACCCGTAACCTCAATCTGACAGACACATATGTAAGACAACAGTTTCTTCCCAAGTACTGGCCTTGGCTTCCTTCTTCAACTATGTGTGGGTGGAAGAGGGACTGTCCCTGGACTACCATCCAAACAAACACCTGGTCTAATTCCACAGAGAAACAAAGGACCAATTGTCTTTCATCtttctttctttaaaaaataaacttGTAGCAGACTTAACAACCTGACTTTACCTTGTATACTGTTCTGTCTGATAAAGAAAATAGACAGATTTTtctgggaggatagagggaggcagtgatgagagggagggagagccatATGCCTCTGAAGTCATGACTTCGTTTGTTGTTTTCTCCTGGTTTCCTGCCATTGGGTTGTGAAGACATCCAAGGCTGTTCATAATATGGTAATGGAACCCTgtcgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtactgcatgaATGGGATACACAGTTACTGTCATTTGGCCACTTTAAAACCTATGTTAAGAGAGAATTTAGACATGGTAAAGAATAAGctagattttttaaaaatatagacGTCACAAAGATGTAGCCACTCCCTCAAACCTCATCATTATTGTGGAGGTCCTTGGTCTGAGGGAGACACCACGGACTGTGTCATAGTGTGGCTCCTCATTGAGTTTCCTGTCAGGCACAAGAGTATAATGAACTAGTGAAGTTGTGATAACCATTGTTAATGTCCCGTGTTTGTAGCTTCACAGACTTTCTGGTGTGTGGGGGTGGGTTATCGCCTGACCAAAATGGTTCTTGACATGTTTGCACttgtttttttcccttcttttaaaaaaaaaaggtgtttTTGATAAATCAGGAGCCATTGCTCTTAATTTGGGTCATGTGAGGGATAAGCACAGATCTAGGGCGGGTCCATAAGTTACCTGCCTCAGAGACCCTCACATGGAGTCCTTTCATTTTAGGGGTGTAGCCTAGATACTGCTAGTGGGTTAGTTAGTAGATGACTGTTGCACAAAGAGAGAAACACATGTTTATATAGCTGGAAGTATAAAACCTGCCCTCTACACAGTTCTTACATAAGATTGGGTTTATAACTAATAAGGCTAATTATATCAACCCGTCGCAACATTAGCAGATTTGATTGACTATGAAGTAAGACTTTCCAACTGTGTATTCATTTGTGACACTTGGATATGACCCAACTAATACCACCATGTAGTTAGAGATTGGACtaatatgaaatatatatatacagtatttcaccACTGTTAAAGTTATTATATGTGAAGCTTATAAAATGAGGTAATTTTCTAATCTCCGTGACTAGGTGTAATGTTATTTATTTGAGTTGGCCAGAGTGGGACAGTCTGATGTCTAAGGCTACTTGTTAAATGCTGGAATCCAATAAAACACACATTTACAGCTTATTTATCTCATGTTAACATAAAGGGCTAAGCTTTTTGTTGAACATAATCTTTACCctatgtatttgtgtttgtgtacatACATGAGTTGTTGTTGCTGCCCCCTTGGGCTCTTGAAAATACAGCTATTTATTTCACATCGTGTGGTCTCTAGATGTgcgtgtttgtgagagagagtgtgcggTGTATGGCTGAATGTTCTGTGACAGGGATTGTCTGGGGGACGTTTCTTTGAAATGCATGCACTCTACACATTTTTATACTGCGTAACGATGGTAAGATTGAAATGTTGTGGACTTGTTCGTCCAGATATGTGGGTGAAGACTTTTTTTTTACAGACGTTTACTTGGCACAAGGAAATAAAGAACAACGATTCACCTGAT

Function

NR:

description
PREDICTED: docking protein 4-like isoform X2

GO: NA

KEGG:

id description
K24037 DOK4_5_6, IRS5_6; docking protein 4/5/6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036980596.1 True 4156 mRNA 0.48 9 58454448 58505295

Neighbor

gene id symbol gene type direction distance location
LOC110526933 LOC106562045 coding upstream 45481 58318920 ~ 58408967 (+)
LOC110526238 LOC106587144 coding upstream 190799 58260503 ~ 58263649 (+)
LOC110526235 LOC106586999 coding upstream 210871 58236260 ~ 58243577 (+)
LOC110526233 LOC106587142 coding upstream 218309 58228407 ~ 58236139 (+)
LOC110526234 LOC106587141 coding upstream 225509 58218513 ~ 58228939 (+)
LOC110526245 LOC106587150 coding downstream 135359 58640654 ~ 58732690 (+)
LOC110526935 LOC106562040 coding downstream 309188 58814483 ~ 59000538 (+)
tshz3b tshz3 coding downstream 837824 59343119 ~ 59376681 (+)
LOC118965037 NA coding downstream 1338333 59843628 ~ 59847586 (+)
LOC110526256 LOC106562011 coding downstream 1345867 59851162 ~ 59861646 (+)
G527028 NA non-coding upstream 17625 58436619 ~ 58436823 (+)
G527020 NA non-coding upstream 22268 58431902 ~ 58432180 (+)
G526995 NA non-coding upstream 41856 58412341 ~ 58412592 (+)
G526991 NA non-coding upstream 44010 58410118 ~ 58410438 (+)
G526649 NA non-coding upstream 148849 58305280 ~ 58305599 (+)
G527075 NA non-coding downstream 4378 58509673 ~ 58510015 (+)
G527076 NA non-coding downstream 4913 58510208 ~ 58510632 (+)
G527104 NA non-coding downstream 6243 58511538 ~ 58511760 (+)
G527105 NA non-coding downstream 6643 58511938 ~ 58512177 (+)
G527113 NA non-coding downstream 22826 58528121 ~ 58581884 (+)
G526628 LOC106587143 other upstream 181612 58272079 ~ 58272836 (+)
G526547 NA other upstream 341629 58110906 ~ 58112819 (+)
G525972 NA other upstream 636168 57817824 ~ 57818280 (+)
G525912 NA other upstream 744108 57703458 ~ 57710340 (+)
G527450 NA other downstream 273428 58778723 ~ 58779017 (+)
G528653 NA other downstream 1266413 59771708 ~ 59772084 (+)
LOC110526282 LOC106561985 other downstream 3466441 61971487 ~ 61979527 (+)
G531406 NA other downstream 3644478 62149773 ~ 62152218 (+)
G532259 NA other downstream 4315125 62820420 ~ 62822616 (+)

Expression


Co-expression Network