LOC110526251 (znf507)


Basic Information

Item Value
gene id LOC110526251
gene name znf507
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 59049218 ~ 59060495 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607055.2
CAGTGCTCCATCCTCGCCATTTTACAGTGTGAGAGACAGAGGCCACCTTTATTGATAAAGGATAAAGcatattttttgtattttgttctgAGGCCAAAGATCTTTCAGATTTGCCGGTTAAGCatggaggacagcagtggagttGCCATCTTGGTCCCCCACTCTAGAGGCCAACAGGAGTCTGTCTTCATCCCTGAAAGGGTGGAAACGCCCCCAGGTACCCTGATGGAGCCTAGGGATGATGACCAGGGGCAGCAGCAGAAACAGGCTGCAGACTCCCTCATCGAGGTGATCGAGAAGCTCAGCAAGATCGTGGAGAAGCGCCCGCGTCGATTCACCCTGGCTGGGAAGAAGAGAGCCCTCATGTCCTGTGCCTCCTTCAGAGTCCCAGAGATCAGGGAGGGCAGTGGTGGGTCCTCCCCCTGCAAGAGAGCCCGGGAGTTGGAGGAAGAGGTGAAAGATCAGAAAATCCAGCCAGACAACAGTGCACCCGCTGGCAGCAGTAGGACCATCACCTGTTACCAGTGCAGCCTGTGTCGGTTCCTGTCCCCGACCTTGAGCCTGCTGAAGGAGCACCTGCGGCAGCACGATGAGCAGCACAGTGACCTCATCCTCATGTGTTCTGAGTGTCGCTTCACCTCCAGCCACCAAGAGGAGCTAGAAGCCCATGTTAGGCTCCACTTTGACTGCAGCAACTCTAACAAGAACCCTGTATCCAGCCAGCAGGCCAGCGAGGGAAATGAGGGGTTACGGATGGGGGGTAATGTGGAGGAGGCTGTGTTCAAAACTGCCATGGACTGTGCTGAGGAGATCCCTGCTAAGAAGAAGTGGTACAGCTATGAGGAGTATGGGATGTACCGCTGCCTGATCTGCAGCTATGTGTGTGGACAGCAGCGAATGTTAAAGACCCATGCATGGAAGCACGCAGGTCTGGTGGACTGCTCTTACCCTATCTTTGAGGACGAGGCAGTGGCACCAGCACCTCCTGTAGTTCCTCCTGCAGAAGAAGCCATAGTAGTCCTCACCCCGGTCCCAGAGAAATCTCAGAACCTCAACAAGATGTCCACATTCCAGATCGATCTCTGTGCCCCTGTGGCGGAATGTGGGAATGACGCCGTGACAGAACCAATCACAGAGGAGAGCCCAGTGGAGGGGCCATATCCCTCTAAAGACCCTGTCACTGAGGAACCAATGTTGGAGGTACAGGTGACCACAGAGACTGAGGTGGAACCTATGCAGGACTGTTGTCATATTACCAGTACAACAGACAGCCTCCTGTCGTCAGCCCAGAAGATCATTAGCTGCAGCCCCAACAGTGCAGACCATGTCAATGTCATAGTGGAACGACTGCCCTGCGCAGAGGAACCTGTGGCTACCCAGcccccccccatcctccccaGCCCAGAGGTGGGCAGAGACAATAGCCTGCTGGCTGCAGAGGAGGCGGGCCATGTGGAGAACCAGCCAATGTTTGTTGACAAGGACGGGCAGCAGGAGGTGGTGATTGGCTGGAGCAACAGTGAGAGGCAGCAGACCACCACGGACCCTCCACGTGACGAGAACGCTCCCCCAGCCCGCAGGAGGACCCACTCTGAGTCTCTGAGGCTTCACTCCCTGGCCGCTGAAGCCCTGGTGACCATGCCCATGAGGACCGCGGAGCACATCAGGAGCATCGTGGGTCAGGGCTCCCAGAGCCCTGACACGGGCCAGTGGCTCCTGGAGATGGCCACGGCTGCAGCAGTAGCAGCCGACAGAGCCCCTGCAGCAGTAGAGGAGCTGACCGGCATGGGCAGCGTGGGGGCAGCACTGGTAGACCTGGAGTTGCAGGGGTCCAGAGAGGACGGGCTGGCCGAGGGCCCCGCCAAGGCTGGCATCAGCCTGTCCCTGCTGACGGTCATAGAGAGGCTAAAGGAGCGCTCGGACCAGAATGCCACGGACGAGGACATCCTAAAGGAACTCCAGGACAACGCCCAGAGCCAGCACGCTGGGGAGGTCAGCGCCTGTGGAGGGGGGGACCCGGGTAATCCTGGTGGGGGTCTGGTGGACTACATCCCTGGCAGCGAGAGGCCCTACCACTGTCGCCTGTGTCGCTACAGTAGTGGGAACAAGGGCTACATCAAGCAGCACCTGCGAGTACACCGCCAGAGACAGCCCTACCAGTGTCCCATCTGTGAACACATTGCCCTGGACAGCAAAGATCTAGAGAGCCACATGATCAACCACTGCAAGACCAGGATGTACCACTGCAAGGAGTGTACTGAGGCCTTTTATTACAAAAGTCAGCTGAGGAACCACGAGACAGACCAGCACGGTTTGGGCGACCCCGGCGCAACACTAACCCCTGTCACTGAAACCACGGCCACCGCGGAGGGATCTGTAAAGATGACAGATGATGACTCCATCAGTTCGCAGAAGGTGTACAAATGTGACGTGTGTGATTACACCAGCTCCACTTACGTTGGAGTTCGGAACCACCGGAGGATCCATAACTCTGACAAGCCTTACAGGTGCTGCAGCTGTGACTTTGCCACGACCAACATGAACAGCCTGAAGAGCCACATGAGGAGACATCCCCAGGAGCACCAGGCTGTCCAGCTACTGGAGCAGTACAGGTGTTCACTGTGTGGCTATGTGTGCAGTCACCCTCCGTCCCTCAAGTCTCACATGTGGAAGCACGCTGGCGATCAGAACTACAACTACGAGCAGGTGAACAAAGCCATCAACGAGGCCATCTCCCAGAGCGGCCGTTCCCCTAGTGCCCCGCAGAAGGTTTCAGCAGTGGGGGAGGCAGTGGCAGAGCAGTCAGGTGTGGTGCAGGGTGGGAAAGAGGACCCAGCCCCTCTAGCAGGAATCCCTGTGGACAGCGTGGGAGCTAGCTCAGGGGCATCAACAGAGCTCATCCAGTGGTCCTCCAGAGAGCCTGCCCCCCAGAGTGAAACCCCCCAGCACAGCCCCCTCGGGTTGGAGGGGGTCCAGTCCCGGGCCGGCATGGAGTATTGTGTGCTGCTGTTCTGCTGCTGTATCTGTGGCTTTGAGTCTACCAgcaaggagagactgatggagcaCATGAAGGAACATGAGGGTGACATCATCAGCATCATCCTGAACAAGGAGCAGCAGCAGGGAGCAGCCcaaccagcagagggcagcacAGCACAGTGAGACAGCATTTAACCCCGTACCCCTCCCCTTACCCCAACAGAGAGCCAGGAACCTACCCCCTCACTCAGACTGACTTAAGTCTGACTTAACAGGGAAGTACTGTACCTTGCATCTTGTTTTCTGGTTCTTAATTTCATGTACTTAACAGAAGGTTACAAAAAGTGTCTCTGTTGGAGCTCAGACATATAGAAAATTGGAAAATTCCAATTTCAAGGCATTGCAGTAAAATGTTATACCTGAACAAGTTCAGACACGTTTAATACCTCAGCAAACAGACATTTCCGTATTTTGAAATGGAGCTCAGTCCATTTTACTCAGCAAACATATATTGACCACATGGCAGCTTTTCTATTCAAATATTTTAATATAATTTAATATATTTAATCCTTCACATTTATAGTTTATCTGTGGCACCTGCACTAGGCTGTACAGAGATGCCATCTACTTGCATGTTGTGTTCATCATagctatatttatattttaatatGGGTTAatacaacctggtctcagagcatttcgtattattctgtaagtAAATCTGAGACAATCGattttgtacattttgcaaattcttaACAGTTGTTAGCCACCTAGCGAGAATTCGTAACATAGCATATGTTTAGCAAatttcataacatattgtatgttttgcaaattcgtaacatattatgaattgtaattcgtaacatatcatacgaaatggatggtggacttccacaaattaatacataccataagaAACGTAAcctatcatactaatttgagtgtcctggatttaccttttactatgttacgtctagcctatgagaccaggctggttaATAATATGTATCAATGTAGGCCTATGCGTGTTGGTTTCCGTTATGTCGAAGCGAAGGAGATGCCTTGTTTTGTTCAATTCACTGTTTGATGCTATTTTGACCTATTGGACCTCTGGAAAGTTATGGTAATGATGGGTCACTTGAGGGTGGTTTCCTAAAGCTGTAGGATAGATAGGCTGGCACAAGTTGTTGTTTTACCAATATTCACCACAGCATCAAGGGCTCTTGAGGCAGAAATATGTTTGGGAGGAATCTTTAAGCTACGATCAGTCTATGATGGTGCATATTAGTGGTCGTGCTAGACCCAGGTGTAATGGTGGCGAGATGCTAAATGGACATCCATTGAACTTTGATTGCAGCCAACACCCAACTGTGTTTAGCTTAGGCTACTTATAGTTACTTTAGTGAAAGTGTTACTGTTCTGATTACGATCATCTTTTCTAGATTCATGTTTTAGTTAAATAATTGCCAAATTTATCACTTGAATATGTTAAGCAATTTCCAAAGTTTCTCCATATAGGCCTAGCACTTGTAGATAATTGATAGATGGAGTGATTGACATCCTAGCACAGAGCGGTGTGCTAGTATTCTAAACCTTTGTGAGAACAAAGGAATAGCAGGTTCAATAGCAGGTTCATTAGTAGCCTGTCTCTAATCTGTGCTGTATTGACCAATAGCAGAGGTTGATATATGACCGGCTTTTCAAGtgataggcctataggctactgtAGACTGACGTTGGATATGGTGTTTTCCGTTTTACTACCTCTGCTAAAGTGTTTCCGAACTTCACTCACCTTTCCATTTAGTTTCACACTAAACATGCTTGGTATGCAGAGTGGTGACATGGAAATAATTTCCATGCCCTTACTGTTTTTACGTAGACAGATGGGTGTAGGAAATTATGATCAAATTAAATATCCATAATTCATGGGATTTCCCGGATTTGCGTTTGTGTAACTCAATGTATCAAATAAATGTAATCATTATCTTCTGCACGCTGAAATTCTCATTATAATGGCAGATTATTATTGTCTCACGTTCATTTACAATTCAAAGTACTAATGTTAGGAAGACCGTGACGGTCTGCATTTAAACCGCACTTAATTCCCCCACCCCCCATTTACATAGTTTGCATTTTAATGAGTGGTTGGGTGAATTAAAGCAAGCGACAACCAGGGAgaacctcatgctaatcatagGCCACGTTCTGCCACGTATAATCTATCAAGGTTTATGGCCGCCGCTTTTTGTATGATTCTATTCGTGGACGTACTGTAGTGCAGCTTCTTGCTGTGTCTTTCTGGGGGCCTAATGATCTTCTCACCTATGCAGACCATGAGACAGAGGggatacagtggggggaaagGGAACTGACTATGGGCCTAAATGAATTGATTTGGTGGTTTTGGGTCAGATGTGCAAATAGTTTTGGATAGATCTGACTTCATATTTCTTGTGGGAAAGGTTCAGGTTATTTTAATGTTCATTTTGCCCACGCGGAGTTGGCTAATTGTGTCATTTGTGAAGCCAATTTGTTGTTTCTGTAGGGCTTATCTTTTGTTTTGTTGGTTCAGTATTTACATTGTCACATGTAGGAAATTGAAACCTTAGATCCAGGACTAAATCTCTTTGTTTTATGTGTCGAGTGTGAAAAACAAACCAGAGAGCCTGGAacctactaccagaccctgttcaaacgcacttaaatatttttgtcttgcccgttcaccctctgaatggcacacatacaatccATGACTGAATTGTTCTAATACATTTGTTCAGTAGCTTATGTCCGGTCTGCTGGCAAGATTGTATACTCAAGTAGGTATACTACCATGCTTGTTAATCTCCTATACTCCTTGTTATTTGTCTATTTGAGTCGGGGAAATGTTAGATTTCAGATGGAGACGCCTCCGTGTGAGTCTAccactctgtctccccccccGGCTTTCATTTCAGAAATTAGGCTATGAACTGGCATGAGAACCTGGATGGGAGGGGGAAAGTTCTTTATAGGGTATGTGACATCTGATCTGGATGATTTGGACATGTTCTTTGTTTGACTAACCAAATCTAATCCCCAGGTCCCTACTCCTTCAACTGCAGGGTGCCATGTGATGGGGTAACTGTCAATAGATTGTGAATTTTCAAAGACATTTTACTGTGATATTTAATGATCATCCTGTCAACGTTTGTGCCTTTTTGATTTGAGAGTCTCTTGTAGTCATTCGATAGCTATTTGTTATAGGCTATGTCTGCCCGTGGGTGCTGTTGAGCGCCCATCTGTTCAGAATGATGTTCCCAGGAGGTCGTGGGGTGTTATTCAGTCAAAGCTGAATAGCCTCTGTAACACctcccctttctctgtgatgtatCCAATCACTTGGTACTGTAATTTCCCACTTGGGTGCACGCTGGTTggatcaatgttgtttccacatcatttcttaaaatgacattgaaccaacgtggaatagatgttgaattaatgtctgtgcccagtgggatgggtCTGTACATAAATAGTTGAAATACTGTAGTATTGCAAACTGACTTTTTTATAATCTATTTTTAAATATATTGTAAAGAAAAAACACTaagttcattttttaaattttttttttataataataaacAAATTTGCTAACaatttggaaaatggctgtgcttttTAATTGACTGTAATGTATTTGAGGGGAGTCTTTGTGTTTTACACTGAGCTACATGCATTTCATGCCAAAGGAGAAAATGTGATCTCACTTACGCTGTTCAGTGCTTACCGTGTTTCAAGTTCAGTgtgatgtgtggacacaggattCGCTCCGCTAGGCCACAGAGCGATGCTTGCTATCTATTTATTTTGGTCATCATAGACAATATTATGTCATatgttatttttttgtaataaataCTTTGTGGATAAA

Function

symbol description
znf507 Predicted to enable DNA binding activity; metal ion binding activity; and protein heterodimerization activity. Predicted to be located in chromosome and nucleus. Predicted to be part of nucleosome. Orthologous to human ZNF507 (zinc finger protein 507).

NR:

description
zinc finger protein 507

GO:

id name namespace
GO:0043229 intracellular organelle cellular_component
GO:0005488 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607055.2 True 6913 mRNA 0.47 7 59049218 59060495

Neighbor

gene id symbol gene type direction distance location
LOC110526249 dpy19l3 coding downstream 8461 59005106 ~ 59040757 (-)
LOC110526244 LOC106587149 coding downstream 459752 58581358 ~ 58589466 (-)
LOC110526242 LOC106587149 coding downstream 492381 58527885 ~ 58556837 (-)
LOC110526240 LOC106587146 coding downstream 728083 58308741 ~ 58321135 (-)
LOC110526239 LOC106587145 coding downstream 743609 58285924 ~ 58305609 (-)
LOC118964913 NA coding upstream 256310 59316805 ~ 59342104 (-)
znf536 LOC106562015 coding upstream 446597 59507092 ~ 59698393 (-)
ccne1 LOC106562012 coding upstream 778935 59839430 ~ 59844236 (-)
si:ch211-260e23.9 LOC100194714 coding upstream 787141 59847636 ~ 59850901 (-)
LOC110526258 pkhf1 coding upstream 802277 59862772 ~ 59864489 (-)
G527445 NA non-coding downstream 275377 58773348 ~ 58773841 (-)
G527435 NA non-coding downstream 278908 58770017 ~ 58770310 (-)
G527414 NA non-coding downstream 294580 58754399 ~ 58754638 (-)
G527398 NA non-coding downstream 307205 58741805 ~ 58742013 (-)
G527388 NA non-coding downstream 311916 58737040 ~ 58737302 (-)
G527910 NA non-coding upstream 104540 59165035 ~ 59165251 (-)
G527944 NA non-coding upstream 128194 59188689 ~ 59188890 (-)
G527952 NA non-coding upstream 136389 59196884 ~ 59197111 (-)
G527954 NA non-coding upstream 138241 59198736 ~ 59199023 (-)
G527449 NA other downstream 270751 58777782 ~ 58778467 (-)
G526903 NA other downstream 790242 58258552 ~ 58258976 (-)
G526784 dhcr7 other downstream 894302 58151850 ~ 58154916 (-)
G526752 NA other downstream 1067427 57981467 ~ 57981791 (-)
ccnd1 LOC106587137 other downstream 1086485 57955388 ~ 57962808 (-)
LOC110526302 LOC106562167 other upstream 3453628 62500665 ~ 62566214 (-)
G532766 NA other upstream 3762410 62822905 ~ 62855007 (-)
G532763 NA other upstream 3791201 62851696 ~ 62852817 (-)
LOC110526310 LOC106587159 other upstream 3925034 62985486 ~ 62991995 (-)

Expression


Co-expression Network