Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110526270 |
| gene name | LOC106587291 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 60671708 ~ 60752783 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| phosphorylase b kinase regulatory subunit beta-like isoform X1 |
| id | description |
|---|---|
| K07190 | PHKA_B; phosphorylase kinase alpha/beta subunit |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036980624.1 | False | 3995 | mRNA | 0.50 | 32 | 60671708 | 60752783 |
| XM_036980622.1 | False | 3886 | mRNA | 0.51 | 31 | 60671713 | 60752783 |
| XM_036980623.1 | True | 3886 | mRNA | 0.51 | 31 | 60671713 | 60752783 |
60,670,000
60,680,000
60,690,000
60,700,000
60,710,000
60,720,000
60,730,000
60,740,000
60,750,000
60,760,000
60,770,000
60,780,000
60,790,000
60,800,000
60,810,000
60,820,000
60,830,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526268 | LOC106587295 | coding | upstream | 146465 | 60507959 ~ 60525243 (+) |
| LOC110526265 | NA | coding | upstream | 219438 | 60448606 ~ 60452270 (+) |
| LOC100653452 | LOC106587300 | coding | upstream | 239401 | 60430201 ~ 60432307 (+) |
| LOC110526261 | LOC106562006 | coding | upstream | 496159 | 60167505 ~ 60175549 (+) |
| LOC110526256 | LOC106562011 | coding | upstream | 810062 | 59851162 ~ 59861646 (+) |
| LOC110526274 | LOC106561991 | coding | downstream | 62800 | 60815583 ~ 60863460 (+) |
| LOC110526277 | LOC106587287 | coding | downstream | 1133050 | 61885833 ~ 61902001 (+) |
| LOC110526278 | LOC106587286 | coding | downstream | 1162936 | 61903571 ~ 61960273 (+) |
| LOC110526279 | LOC106587285 | coding | downstream | 1208603 | 61961386 ~ 61964415 (+) |
| LOC110526282 | LOC106561985 | coding | downstream | 1218704 | 61971487 ~ 61979527 (+) |
| G529539 | neto2 | non-coding | upstream | 110887 | 60543729 ~ 60560821 (+) |
| G529537 | NA | non-coding | upstream | 130754 | 60540739 ~ 60540954 (+) |
| G529592 | NA | non-coding | upstream | 136612 | 60534893 ~ 60535096 (+) |
| G529576 | NA | non-coding | upstream | 166888 | 60501889 ~ 60504820 (+) |
| G529574 | cssa11h16orf87 | non-coding | upstream | 172524 | 60498147 ~ 60499184 (+) |
| G529542 | NA | non-coding | downstream | 489 | 60753272 ~ 60753484 (+) |
| G529875 | NA | non-coding | downstream | 8295 | 60761078 ~ 60761319 (+) |
| G529890 | NA | non-coding | downstream | 20934 | 60773717 ~ 60773958 (+) |
| G529898 | NA | non-coding | downstream | 24597 | 60777380 ~ 60777622 (+) |
| G529940 | NA | non-coding | downstream | 100997 | 60853780 ~ 60854103 (+) |
| G528653 | NA | other | upstream | 899624 | 59771708 ~ 59772084 (+) |
| G527450 | NA | other | upstream | 1892691 | 58778723 ~ 58779017 (+) |
| LOC110526933 | LOC106562045 | other | upstream | 2299740 | 58318920 ~ 58408967 (+) |
| G526628 | LOC106587143 | other | upstream | 2398872 | 58272079 ~ 58272836 (+) |
| G526547 | NA | other | upstream | 2558889 | 58110906 ~ 58112819 (+) |
| G531406 | NA | other | downstream | 1396990 | 62149773 ~ 62152218 (+) |
| G532259 | NA | other | downstream | 2067637 | 62820420 ~ 62822616 (+) |
| LOC110526311 | LOC106587159 | other | downstream | 2259475 | 63005672 ~ 63068991 (+) |
| G532237 | LOC106591742 | other | downstream | 2280148 | 63032931 ~ 63198734 (+) |
