Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110526309 |
| gene name | dpep1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 62966215 ~ 62974919 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| dpep1 | Predicted to enable metal ion binding activity and metallodipeptidase activity. Predicted to act upstream of or within lipid metabolic process and proteolysis. Predicted to be located in apical plasma membrane. Predicted to be anchored component of membrane. Orthologous to human DPEP1 (dipeptidase 1). |
| description |
|---|
| dipeptidase 1 |
| id | description |
|---|---|
| K01273 | DPEP; membrane dipeptidase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036980653.1 | True | 1950 | mRNA | 0.48 | 10 | 62966215 | 62974919 |
62,960,000
62,962,000
62,964,000
62,966,000
62,968,000
62,970,000
62,972,000
62,974,000
62,976,000
62,978,000
62,980,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526305 | LOC106587257 | coding | downstream | 217834 | 62742187 ~ 62748381 (-) |
| LOC110526304 | NA | coding | downstream | 319040 | 62623295 ~ 62647175 (-) |
| LOC110526302 | LOC106562167 | coding | downstream | 400001 | 62500665 ~ 62566214 (-) |
| pabpn1l | LOC106587263 | coding | downstream | 471411 | 62491676 ~ 62494804 (-) |
| LOC110526298 | galns | coding | downstream | 476068 | 62467186 ~ 62490147 (-) |
| LOC110526310 | LOC106587159 | coding | upstream | 10567 | 62985486 ~ 62991995 (-) |
| LOC118936659 | LOC106581595 | coding | upstream | 58010 | 63032929 ~ 63035742 (-) |
| LOC118964917 | NA | coding | upstream | 107300 | 63082219 ~ 63084974 (-) |
| LOC118964916 | LOC106581595 | coding | upstream | 112143 | 63087062 ~ 63089877 (-) |
| LOC118964918 | LOC106598822 | coding | upstream | 165929 | 63140848 ~ 63143637 (-) |
| G532848 | LOC106562160 | non-coding | downstream | 178 | 62962037 ~ 62966037 (-) |
| G532847 | NA | non-coding | downstream | 4376 | 62960700 ~ 62961839 (-) |
| G532846 | NA | non-coding | downstream | 6814 | 62959178 ~ 62959401 (-) |
| G532833 | NA | non-coding | downstream | 19065 | 62944109 ~ 62947150 (-) |
| G532762 | NA | non-coding | downstream | 76544 | 62889144 ~ 62889671 (-) |
| G532855 | NA | non-coding | upstream | 3570 | 62978489 ~ 62978753 (-) |
| G532875 | NA | non-coding | upstream | 22788 | 62997707 ~ 62998330 (-) |
| G532886 | NA | non-coding | upstream | 34247 | 63009166 ~ 63009447 (-) |
| G532871 | NA | non-coding | upstream | 105901 | 63080820 ~ 63140339 (-) |
| G532766 | NA | other | downstream | 111208 | 62822905 ~ 62855007 (-) |
| G532763 | NA | other | downstream | 113398 | 62851696 ~ 62852817 (-) |
| znf536 | LOC106562015 | other | downstream | 3269252 | 59507092 ~ 59698393 (-) |
| G527449 | NA | other | downstream | 4187748 | 58777782 ~ 58778467 (-) |
| igdcc3 | LOC106562146 | other | upstream | 848980 | 63823887 ~ 63944930 (-) |
| G534201 | NA | other | upstream | 1523534 | 64498453 ~ 64499614 (-) |
| G534349 | NA | other | upstream | 1603879 | 64578798 ~ 64614796 (-) |
| G534603 | NA | other | upstream | 1880576 | 64855495 ~ 64895099 (-) |
