LOC110526337 (LOC106587231)


Basic Information

Item Value
gene id LOC110526337
gene name LOC106587231
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 64494819 ~ 64499621 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607215.2
aatacattgttGCCATCATGTATATTCCATTACTTCCGCTTTGGTCAGCGTGATTGTGGACCACGTGTATAACACGGAAGCAGATCGTGTCAACAAAGCAAATCCAACAACTCATGATGTCGGAGTGGCACCTGTCATTGAAGCTGGTGGATCAGCCCAAATCCACCTTCCACTTCCCTGAGACGATGCCTGGAGACGTGTCTCCCGGCGGGTACCGAGTCTCTACTCTGAAACAGCTCGTTGCAGCACAGCTTCCTGATTCCCTACCGGACCCCGAACTCATAGAGCTGGTACACTGTGGTCGCAAGTTGAAGGACGACCTGACTTTAGACTCCTGTGGGATCCAGCCTGGATCCACCCTGCACATCCTCAAAAGGACCTGGCCTGAACCAGAAATCAATCCAGAGCCAGTGAACAGGACGACTGCAGCCAGGGAGTTCCGTGTGCTGCAGGCAGCCCTCCACTCCAACTCCACCTATAGAGACTCGGTGTTTAAGATGCTGACTAATAAGGAGTCTCTAGATCAGATCATTGTGGCCACGCCAGGGCTGAGATCTGACCCGGTAGCACTAGGAGTGCTTCAAGACAAAGATCTATTTGTGCAATTCACAGACCCTAACATGCTGGATGTGTTGATCAGTTCTCACCCAGCCTTGGTCAATGCCATCATCCTGGTCCTCCACTCAGTGGCTGGCAGCATGCCTGCTCAGTCCAGCGCCGGCTCCTCCCGCAACGTCTCCTCCAGCTCCTACAGTGACATGCCGGGAGGGTTTATGTTTGAGGGCATGTCTGATGACGATGAAGATTTCCAATCGGGAAATCCGGCAGGCCCATCCAACCGAACCGGGGGCCCAGCAGGAATGCGGCCTGTGTCccttggccatagtggagctACAGGCCCTCGACCCATAACACAGAGTGAGCTGGCCACTGCCCTGGCCCTGGCCAGTACTCCTGAGAGCAGTGCTGTTACTCCCACTGCAGGGGCTCAGCAGGACCCCTCATCTGGAGTGCCTCCCATGCCAGCAGGGACTCCTGTCAGCAATGACCTTTTCAGCCAGGCACTGCAGCAGGCTCTACAGGCCTCCAGCATGTCCGGCATGTCCTCTCTGCAGGGGCGTTGGCAGTCCCAGCTGCAGCAGCTGAGAGACATGGGGATCCAGGATGAGGAGCTGATGTTACGGGCGCTGCAGGCTACAGACGGGGACATCCAGTCAGCTCTGGAGCTCATCTTCGCTGGAGGTCCAGGACTCTGAGCCAAGCCAGGGCCCTGAGAGAGGAGAGTGCAGGGGGAAACGTCTCTACACAGACCCAAGCTGATGGCTCTGGTCATTCTGCCATTAGGCTGtgatatgagagagaggagagtgcagGGGGAAACGTCTCTACACAGACCCAAGCTGATGCTCTGGTCATTCTGCCATTAGGCTGTGATATGGATACTTAAATGGACACAATGCTTCAGACATGAAGACCTCATTACTACTCCTCTACCCTTTCATACACAGCCTAAATGGAACAACCTTTAAATGGCTGGCAAAACATTTCTTATTTTTGTTTTTGACTTGTAATAAAGATAAACATGTACCTT
>XM_021607216.2
GACCACGTGTATAACACGGAAGCAGATCGTGTCAACAAAGCAAATCATTGTCGTTGTTCCTGTCTAGCAACAACTCATGATGTCGGAGTGGCACCTGTCATTGAAGCTGGTGGATCAGCCCAAATCCACCTTCCACTTCCCTGAGACGATGCCTGGAGACGTGTCTCCCGGCGGGTACCGAGTCTCTACTCTGAAACAGCTCGTTGCAGCACAGCTTCCTGATTCCCTACCGGACCCCGAACTCATAGAGCTGGTACACTGTGGTCGCAAGTTGAAGGACGACCTGACTTTAGACTCCTGTGGGATCCAGCCTGGATCCACCCTGCACATCCTCAAAAGGACCTGGCCTGAACCAGAAATCAATCCAGAGCCAGTGAACAGGACGACTGCAGCCAGGGAGTTCCGTGTGCTGCAGGCAGCCCTCCACTCCAACTCCACCTATAGAGACTCGGTGTTTAAGATGCTGACTAATAAGGAGTCTCTAGATCAGATCATTGTGGCCACGCCAGGGCTGAGATCTGACCCGGTAGCACTAGGAGTGCTTCAAGACAAAGATCTATTTGTGCAATTCACAGACCCTAACATGCTGGATGTGTTGATCAGTTCTCACCCAGCCTTGGTCAATGCCATCATCCTGGTCCTCCACTCAGTGGCTGGCAGCATGCCTGCTCAGTCCAGCGCCGGCTCCTCCCGCAACGTCTCCTCCAGCTCCTACAGTGACATGCCGGGAGGGTTTATGTTTGAGGGCATGTCTGATGACGATGAAGATTTCCAATCGGGAAATCCGGCAGGCCCATCCAACCGAACCGGGGGCCCAGCAGGAATGCGGCCTGTGTCccttggccatagtggagctACAGGCCCTCGACCCATAACACAGAGTGAGCTGGCCACTGCCCTGGCCCTGGCCAGTACTCCTGAGAGCAGTGCTGTTACTCCCACTGCAGGGGCTCAGCAGGACCCCTCATCTGGAGTGCCTCCCATGCCAGCAGGGACTCCTGTCAGCAATGACCTTTTCAGCCAGGCACTGCAGCAGGCTCTACAGGCCTCCAGCATGTCCGGCATGTCCTCTCTGCAGGGGCGTTGGCAGTCCCAGCTGCAGCAGCTGAGAGACATGGGGATCCAGGATGAGGAGCTGATGTTACGGGCGCTGCAGGCTACAGACGGGGACATCCAGTCAGCTCTGGAGCTCATCTTCGCTGGAGGTCCAGGACTCTGAGCCAAGCCAGGGCCCTGAGAGAGGAGAGTGCAGGGGGAAACGTCTCTACACAGACCCAAGCTGATGGCTCTGGTCATTCTGCCATTAGGCTGtgatatgagagagaggagagtgcagGGGGAAACGTCTCTACACAGACCCAAGCTGATGCTCTGGTCATTCTGCCATTAGGCTGTGATATGGATACTTAAATGGACACAATGCTTCAGACATGAAGACCTCATTACTACTCCTCTACCCTTTCATACACAGCCTAAATGGAACAACCTTTAAATGGCTGGCAAAACATTTCTTATTTTTGTTTTTGACTTGTAATAAAGATAAACATGTACCTT
>XM_021607217.2
AGCAAATCGTGAGTCTGCAGTACAATTTTGCAATGTGTTTCATGTAAATCCATTCGTGGATTTCATACGTTTTAGTGGATGCCATACGAACGTTATTTTTGAAAACTTCATCCAAACGCAACAACTCATGATGTCGGAGTGGCACCTGTCATTGAAGCTGGTGGATCAGCCCAAATCCACCTTCCACTTCCCTGAGACGATGCCTGGAGACGTGTCTCCCGGCGGGTACCGAGTCTCTACTCTGAAACAGCTCGTTGCAGCACAGCTTCCTGATTCCCTACCGGACCCCGAACTCATAGAGCTGGTACACTGTGGTCGCAAGTTGAAGGACGACCTGACTTTAGACTCCTGTGGGATCCAGCCTGGATCCACCCTGCACATCCTCAAAAGGACCTGGCCTGAACCAGAAATCAATCCAGAGCCAGTGAACAGGACGACTGCAGCCAGGGAGTTCCGTGTGCTGCAGGCAGCCCTCCACTCCAACTCCACCTATAGAGACTCGGTGTTTAAGATGCTGACTAATAAGGAGTCTCTAGATCAGATCATTGTGGCCACGCCAGGGCTGAGATCTGACCCGGTAGCACTAGGAGTGCTTCAAGACAAAGATCTATTTGTGCAATTCACAGACCCTAACATGCTGGATGTGTTGATCAGTTCTCACCCAGCCTTGGTCAATGCCATCATCCTGGTCCTCCACTCAGTGGCTGGCAGCATGCCTGCTCAGTCCAGCGCCGGCTCCTCCCGCAACGTCTCCTCCAGCTCCTACAGTGACATGCCGGGAGGGTTTATGTTTGAGGGCATGTCTGATGACGATGAAGATTTCCAATCGGGAAATCCGGCAGGCCCATCCAACCGAACCGGGGGCCCAGCAGGAATGCGGCCTGTGTCccttggccatagtggagctACAGGCCCTCGACCCATAACACAGAGTGAGCTGGCCACTGCCCTGGCCCTGGCCAGTACTCCTGAGAGCAGTGCTGTTACTCCCACTGCAGGGGCTCAGCAGGACCCCTCATCTGGAGTGCCTCCCATGCCAGCAGGGACTCCTGTCAGCAATGACCTTTTCAGCCAGGCACTGCAGCAGGCTCTACAGGCCTCCAGCATGTCCGGCATGTCCTCTCTGCAGGGGCGTTGGCAGTCCCAGCTGCAGCAGCTGAGAGACATGGGGATCCAGGATGAGGAGCTGATGTTACGGGCGCTGCAGGCTACAGACGGGGACATCCAGTCAGCTCTGGAGCTCATCTTCGCTGGAGGTCCAGGACTCTGAGCCAAGCCAGGGCCCTGAGAGAGGAGAGTGCAGGGGGAAACGTCTCTACACAGACCCAAGCTGATGGCTCTGGTCATTCTGCCATTAGGCTGtgatatgagagagaggagagtgcagGGGGAAACGTCTCTACACAGACCCAAGCTGATGCTCTGGTCATTCTGCCATTAGGCTGTGATATGGATACTTAAATGGACACAATGCTTCAGACATGAAGACCTCATTACTACTCCTCTACCCTTTCATACACAGCCTAAATGGAACAACCTTTAAATGGCTGGCAAAACATTTCTTATTTTTGTTTTTGACTTGTAATAAAGATAAACATGTACCTT
>XM_036980689.1
CTTTACTTGCTAAAAATGTTCATGCCTAATCAACAACTCATGATGTCGGAGTGGCACCTGTCATTGAAGCTGGTGGATCAGCCCAAATCCACCTTCCACTTCCCTGAGACGATGCCTGGAGACGTGTCTCCCGGCGGGTACCGAGTCTCTACTCTGAAACAGCTCGTTGCAGCACAGCTTCCTGATTCCCTACCGGACCCCGAACTCATAGAGCTGGTACACTGTGGTCGCAAGTTGAAGGACGACCTGACTTTAGACTCCTGTGGGATCCAGCCTGGATCCACCCTGCACATCCTCAAAAGGACCTGGCCTGAACCAGAAATCAATCCAGAGCCAGTGAACAGGACGACTGCAGCCAGGGAGTTCCGTGTGCTGCAGGCAGCCCTCCACTCCAACTCCACCTATAGAGACTCGGTGTTTAAGATGCTGACTAATAAGGAGTCTCTAGATCAGATCATTGTGGCCACGCCAGGGCTGAGATCTGACCCGGTAGCACTAGGAGTGCTTCAAGACAAAGATCTATTTGTGCAATTCACAGACCCTAACATGCTGGATGTGTTGATCAGTTCTCACCCAGCCTTGGTCAATGCCATCATCCTGGTCCTCCACTCAGTGGCTGGCAGCATGCCTGCTCAGTCCAGCGCCGGCTCCTCCCGCAACGTCTCCTCCAGCTCCTACAGTGACATGCCGGGAGGGTTTATGTTTGAGGGCATGTCTGATGACGATGAAGATTTCCAATCGGGAAATCCGGCAGGCCCATCCAACCGAACCGGGGGCCCAGCAGGAATGCGGCCTGTGTCccttggccatagtggagctACAGGCCCTCGACCCATAACACAGAGTGAGCTGGCCACTGCCCTGGCCCTGGCCAGTACTCCTGAGAGCAGTGCTGTTACTCCCACTGCAGGGGCTCAGCAGGACCCCTCATCTGGAGTGCCTCCCATGCCAGCAGGGACTCCTGTCAGCAATGACCTTTTCAGCCAGGCACTGCAGCAGGCTCTACAGGCCTCCAGCATGTCCGGCATGTCCTCTCTGCAGGGGCGTTGGCAGTCCCAGCTGCAGCAGCTGAGAGACATGGGGATCCAGGATGAGGAGCTGATGTTACGGGCGCTGCAGGCTACAGACGGGGACATCCAGTCAGCTCTGGAGCTCATCTTCGCTGGAGGTCCAGGACTCTGAGCCAAGCCAGGGCCCTGAGAGAGGAGAGTGCAGGGGGAAACGTCTCTACACAGACCCAAGCTGATGGCTCTGGTCATTCTGCCATTAGGCTGtgatatgagagagaggagagtgcagGGGGAAACGTCTCTACACAGACCCAAGCTGATGCTCTGGTCATTCTGCCATTAGGCTGTGATATGGATACTTAAATGGACACAATGCTTCAGACATGAAGACCTCATTACTACTCCTCTACCCTTTCATACACAGCCTAAATGGAACAACCTTTAAATGGCTGGCAAAACATTTCTTATTTTTGTTTTTGACTTGTAATAAAGATAAACATGTACCTTATCTA
>XM_036980690.1
CTTTACTTGCTAAAAATGTTCATGCCTAATCAACAACTCATGATGTCGGAGTGGCACCTGTCATTGAAGCTGGTGGATCAGCCCAAATCCACCTTCCACTTCCCTGAGACGATGCCTGGAGACGTGTCTCCCGGCGGGTACCGAGTCTCTACTCTGAAACAGCTCGTTGCAGCACAGCTTCCTGATTCCCTACCGGACCCCGAACTCATAGAGCTGGTACACTGTGGTCGCAAGTTGAAGGACGACCTGACTTTAGACTCCTGTGGGATCCAGCCTGGATCCACCCTGCACATCCTCAAAAGGACCTGGCCTGAACCAGAAATCAATCCAGAGCCAGTGAACAGGACGACTGCAGCCAGGGAGTTCCGTGTGCTGCAGGCAGCCCTCCACTCCAACTCCACCTATAGAGACTCGGTGTTTAAGATGCTGACTAATAAGGAGTCTCTAGATCAGATCATTGTGGCCACGCCAGGGCTGAGATCTGACCCGGTAGCACTAGGAGTGCTTCAAGACAAAGATCTATTTGTGCAATTCACAGACCCTAACATGCTGGATGTGTTGATCAGTTCTCACCCAGCCTTGGTCAATGCCATCATCCTGGTCCTCCACTCAGTGGCTGGCAGCATGCCTGCTCAGTCCAGCGCCGGCTCCTCCCGCAACGTCTCCTCCAGCTCCTACAGTGACATGCCGGGAGGGTTTATGTTTGAGGGCATGTCTGATGACGATGAAGATTTCCAATCGGGAAATCCGGCAGGCCCATCCAACCGAACCGGGGGCCCAGCAGGAATGCGGCCTGTGTCccttggccatagtggagctACAGGCCCTCGACCCATAACACAGAGTGAGCTGGCCACTGCCCTGGCCCTGGCCAGTACTCCTGAGAGCAGTGCTGTTACTCCCACTGCAGGGGCTCAGGACCCCTCATCTGGAGTGCCTCCCATGCCAGCAGGGACTCCTGTCAGCAATGACCTTTTCAGCCAGGCACTGCAGCAGGCTCTACAGGCCTCCAGCATGTCCGGCATGTCCTCTCTGCAGGGGCGTTGGCAGTCCCAGCTGCAGCAGCTGAGAGACATGGGGATCCAGGATGAGGAGCTGATGTTACGGGCGCTGCAGGCTACAGACGGGGACATCCAGTCAGCTCTGGAGCTCATCTTCGCTGGAGGTCCAGGACTCTGAGCCAAGCCAGGGCCCTGAGAGAGGAGAGTGCAGGGGGAAACGTCTCTACACAGACCCAAGCTGATGGCTCTGGTCATTCTGCCATTAGGCTGtgatatgagagagaggagagtgcagGGGGAAACGTCTCTACACAGACCCAAGCTGATGCTCTGGTCATTCTGCCATTAGGCTGTGATATGGATACTTAAATGGACACAATGCTTCAGACATGAAGACCTCATTACTACTCCTCTACCCTTTCATACACAGCCTAAATGGAACAACCTTTAAATGGCTGGCAAAACATTTCTTATTTTTGTTTTTGACTTGTAATAAAGATAAACATGTACCTTATCTA

Function

NR:

description
PREDICTED: ubiquitin-like protein 7 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607215.2 False 1591 mRNA 0.54 11 64494819 64499616
XM_021607216.2 False 1554 mRNA 0.54 11 64494877 64499616
XM_021607217.2 False 1605 mRNA 0.53 11 64494915 64499616
XM_036980689.1 False 1522 mRNA 0.54 11 64495035 64499621
XM_036980690.1 True 1519 mRNA 0.54 11 64495035 64499621

Neighbor

gene id symbol gene type direction distance location
insyn1 LOC106587233 coding upstream 217064 64218174 ~ 64277755 (+)
LOC110526331 LOC106587235 coding upstream 462527 64026685 ~ 64032292 (+)
LOC110526326 eif3j coding upstream 731932 63758243 ~ 63762887 (+)
strc1 LOC106587240 coding upstream 737581 63730434 ~ 63757238 (+)
LOC110526325 ctdspl2 coding upstream 766989 63702297 ~ 63727830 (+)
LOC110526343 LOC106587228 coding downstream 253408 64753029 ~ 64765798 (+)
LOC110526344 LOC106587225 coding downstream 269478 64769099 ~ 64781704 (+)
chrna5 LOC106587222 coding downstream 333003 64832624 ~ 64851098 (+)
LOC110526346 NA coding downstream 355355 64854976 ~ 64858185 (+)
LOC118936302 NA coding downstream 382101 64881722 ~ 64884136 (+)
G533907 NA non-coding upstream 77990 64415718 ~ 64416829 (+)
G533903 NA non-coding upstream 79384 64415108 ~ 64415435 (+)
G533898 NA non-coding upstream 87958 64404930 ~ 64406861 (+)
G533889 NA non-coding upstream 101344 64393161 ~ 64393475 (+)
G533864 NA non-coding upstream 141697 64352890 ~ 64353122 (+)
G533953 LOC100194703 non-coding downstream 4485 64504106 ~ 64507098 (+)
G533991 NA non-coding downstream 54243 64553864 ~ 64573072 (+)
G534128 NA non-coding downstream 258209 64757830 ~ 64758115 (+)
G534130 NA non-coding downstream 260613 64760234 ~ 64760505 (+)
G532489 NA other upstream 1151064 63308533 ~ 63343755 (+)
LOC100750227 LOC106587244 other upstream 1155321 63338236 ~ 63549030 (+)
G532237 LOC106591742 other upstream 1296085 63032931 ~ 63198734 (+)
LOC110526311 LOC106587159 other upstream 1479833 63005672 ~ 63068991 (+)
G532259 NA other upstream 1672203 62820420 ~ 62822616 (+)
G534453 NA other downstream 290701 64790322 ~ 64847104 (+)
G534653 NA other downstream 613659 65113280 ~ 65169563 (+)
LOC110526356 LOC106587213 other downstream 656888 65065380 ~ 65178884 (+)
G535150 LOC106587155 other downstream 1348002 65847623 ~ 65849441 (+)

Expression


Co-expression Network