LOC118936302


Basic Information

Item Value
gene id LOC118936302
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 64881722 ~ 64884136 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607237.2
TTGAAAAACCGGAGCGTTTGAAAATTGCGGGTGGAGCAACACGGATGTCAAgagactatactatactgacttcGCCTTTCCGCTCTGGTTTCCGAGATTATTACAAATATCGACGAACTTATTTACAGCCATAATAGGCTTTGAAATAGTCTTCACTAACAACTATTTGGATGAAAACCGGAACGTAAAATTAATGCATGTGTGAAGCAGCTAGTGAAGATGTGTCTCCATGGTATCTTCATTGTTACCCTGTTGACCCTCTCTATTCCTGCTGTCCATGGTGGGAAAGTCCTGGTGTTTCCTCAAGACGGCAGCCACTGGATCAACATGAAGGTCATTATTGAAGCGCTGCATTCAAGAGGtcacagtgtgtcagtagtgcgGCCATCAGACAGCTGGTACATCAAGGAAACCTCCCCTCACTACAGTTCAATCACAATTGATATTCCAGGTGGAGCTGATGAGGAATTCTTTAGCTCATTTGTGTCAAGACaaatacagatacagagagagggaaagtctGCTTGGACTCGTTTTAGTTTGGACATGGAGTTGAAGGACAGATTTTCTGAAATGCACCGCAAAGTGTGTGAGATGGTAATCCAAATGTTAGAGAATGAACCGTTGATGCAGTCTATTAGAGAAACCAAGTATGACTTGGTTCTGACAGACCCAGCCAATGGGGGAGGTGTTGTGCTGGCGCACTATTTAAATGTGCCCCTTGTTTTCAATGTTAGATGGACTATACATGGTGAGGCTCATTTTGCTATTGCTCCCTCTCCGCTATCGTATGTTCCATTTCCTGTTGCAGAGTTAACAGACAATATGAGTTTTTTTCAGAGGGTCCGTAACTTCCTAGTTTATGTCATCAGGCAGCATCTGTACAAACAGACAGTGGGGCCTCATTATTCCACTTTGGTTAGTCGTTACTTTGGTCCTGAGGTCGACTACTTCTCATTGTTTCAAGCTGCTGATTTATGGCTCATGAGAGTTGACTTTGTGTTTGAGTTCCCTCGTCCCACCATGCCTAATGTTATCTATATGGGAGGGTTCCAATGTAAACCTGCCAAGCCTCTTCCCCAAGACCTGGAGGAGTTTGTTCATAGTTCAGGGGAACATGGAGTCATTATCATGTCTTTGGGAACTTTAATTGGACAACTTCCACATGATATAGCTGATGAGATAGCTGCTGCTTTTTCCCACCTGCCTCAGAAGGTAATCTGGAGGTACAAAGGAGACAGACCAGCTACTCTGGGCAACAACACCTTACTAGTTGACTGGATGCCTCAGAATGATCTTTTAGGACACCCTAAGACAAGGCTGTTTGTAGCTCATGGAGGAACAAATGGTATTTTCGAGGCTATCTACCACAGTGTTCCAATAGTAGGCCTTCCTCTGGTGTTCGACCAACCTGACAATCTTTCTCGAATGAAAGTGAAGGGTGTAGCAAAGGTTGTGGATTTAGCAACTCTAGATAGAAACATTTTCACCCGAGCCTTACAGGAAGTTCTGAATGAGCCGTCCTACAGGATGAACATGCAGAGACTCTCCAGGCTACACCGGGACGTGCCAATGGGACCCCTGGACACTGCCCTCTTCTGGATTGAGTTTGTCATGAGACACAAAGGTGCTGCTCACCTGCGTACAGAGTCCTACAGAATGCCCTGGTACTCCTACCACTCTGTAGATGTAATGGTGTTTTTACTGACTGTTGTGTTATTTACTCTGCTGGTTTTCATTGGCATTATCAGATGTTTCTGTTGCAGGGCATGtttgaaaataaaaattaaaGAGGAATGATTATGGATTTCATCTGTACAGAGAGTGGTACATACAGAGTGTGGTACATACAATATCTGTACAGAGTGTGGTACATACTTGTTTTCTCACTAATTTTACTTTTTGTTCACGTGACAaatacagttgaaattggaagtttacacacacctaagtcaagtacatttaaactcagtttttcccaattcctgacatttaatcctcgtaaaaattccctgtcttaggtcagttaggatcactactt

Function

NR:

description
UDP-glucuronosyltransferase 2C1-like isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016758 transferase activity, transferring hexosyl groups molecular_function

KEGG:

id description
K00699 UGT; glucuronosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607237.2 True 2041 mRNA 0.43 2 64881722 64884136

Neighbor

gene id symbol gene type direction distance location
LOC110526346 NA coding upstream 23537 64854976 ~ 64858185 (+)
chrna5 LOC106587222 coding upstream 30624 64832624 ~ 64851098 (+)
LOC110526344 LOC106587225 coding upstream 100018 64769099 ~ 64781704 (+)
LOC110526343 LOC106587228 coding upstream 115924 64753029 ~ 64765798 (+)
LOC110526337 LOC106587231 coding upstream 382101 64494819 ~ 64499621 (+)
LOC110526348 NA coding downstream 7550 64891686 ~ 64895115 (+)
LOC110526349 LOC106587217 coding downstream 15665 64899801 ~ 64962147 (+)
LOC110526353 dhdh coding downstream 219088 65103224 ~ 65106320 (+)
dhdh.2 LOC106587215 coding downstream 222573 65106709 ~ 65113071 (+)
LOC110526356 LOC106587213 coding downstream 255744 65065380 ~ 65178884 (+)
G534449 NA non-coding upstream 76859 64785620 ~ 64804863 (+)
G534445 NA non-coding upstream 107708 64773647 ~ 64774014 (+)
G534130 NA non-coding upstream 121217 64760234 ~ 64760505 (+)
G534509 NA non-coding downstream 72394 64956530 ~ 64957769 (+)
G534510 NA non-coding downstream 78303 64962439 ~ 64964242 (+)
G534530 NA non-coding downstream 80166 64964302 ~ 64964542 (+)
G534532 NA non-coding downstream 83661 64967797 ~ 64968004 (+)
G534453 NA other upstream 34618 64790322 ~ 64847104 (+)
G532489 NA other upstream 1537967 63308533 ~ 63343755 (+)
LOC100750227 LOC106587244 other upstream 1542224 63338236 ~ 63549030 (+)
G532237 LOC106591742 other upstream 1682988 63032931 ~ 63198734 (+)
G534653 NA other downstream 229144 65113280 ~ 65169563 (+)
G535150 LOC106587155 other downstream 963487 65847623 ~ 65849441 (+)
G536406 NA other downstream 1718649 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 2129084 67013220 ~ 67018653 (+)

Expression


Co-expression Network