LOC110526353 (dhdh)


Basic Information

Item Value
gene id LOC110526353
gene name dhdh
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 65103224 ~ 65106320 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607251.2
GGTATTCCCAGTCTCTCCAGCATATAAATGCAGCAGCAGCTCTCCAGGGTGAAGCTACCAGCTCTGTGGAGCTCCACTACATCTGATGATCCGGCACTCCACAAGGTCACAACCGCTCTCCTCAGCTCTGACCCGAGGCCCAGGCACAGCCCCTCTTACCTGCCAACTACCATCTGTTCAAGATGGCGACCCGGTGGGGACTCTGCGGTGCGGGGAAGATCAGCCACGACTTCAGTGTGGCCATGAAAACCCTCCCTCCTGGAGACCACCAGATAGTGGCGGTGGCTGCGAGGAGTCTGGAGCGTGCCCGGGAGTTTGCCAAGAAGCACAGCATCCCTAAGGCCTATGGGAGCTATGAAGAGCTGGCCAGCGACCCAGAGATTGACATGGTGTACCTGGGCGTGCTGCACACGGAGCACTGGCGCCTGGGCCTGCTGGTACTCCACGCAGGGAAGAACATGCTGTGTGAGAAGCCCTTTGCCATGAACTCCAGGGAGGTGGGGGACCTCATTGCTGCCTCCAAGAAGTCCAATGTCTTTCTCATGGAGGTGTGGGAAAGGCTCAATGAGTGTTGGGGGTTCCATCAACGTGTCTCAGCCATCTGGTCCCGTTGTTTCCCACTGCACAGGGAGGTTCGCAGGCTGCTGGCTGAGGACGCCATCGGCGACGTAAAGCTGGTGAAGGCCTCTTTTGGCTCCCCTCAGCTTCACATCCCCCGCTCGGTGGAGAAGGAGCTTGGAGGAGGCGCTCTGCTGGACATTGGGGTCTACACCTTGCAGTTTGTGTTGATGGTGTTCAACGGGGAGAGGCCAGAGTCCATCCATGCCACTGGAGTTCTTCTCAACTCAGGAGTGGATGAGtccatggtggtggtgatgaagtTTCCCAGGAACAGGCTGGCTTGCTGTTTCTTCTCCATCGCTGTTTCACTGCCTAACGACGCCACCATCAGCGGAACAACGGGCACCATCAGGGTTCTAGGTCCCATGCATTGTCCCACCACACTGGAGGTGAATGGGAAGACGACACAGTACCCCCTGCCGGAGCCCTCCTTACCTCTGAACTTCACAAACAGCACTGGGCTGCGCTACGAGGCTGAGGAAGTCAGGCAGTGCCTGCTCAAAGGACTGAAGGAGAGCCCCAGAATGCCCCTGTCTGAGTCGGCCCTGCTCACTGAGGTTATGGATGAGTGCAGGAAACAAGTGGGAGTGGTCTTCAACCAGGACCGCCAATAACCACCCCTCACTCGCCACTCGACCATAGTCCATCTGACCTGTGCCACAGGACCTGGACATGGACAGAGCTGTttgaggcaggagagagggatcaAGCCATGAGTGTATATGATCCCCTCACGACTTAGCCCTATACAGCTTGCACCTGATGTGAGACAAATTTGAACACGATGACGATAAAGACAAGGAAGCCTGAGTTGATTAGTAGGCTACTGTGAGCTGCTAAGACTGACAGGTTAAATTAAGAGTACCAAAATCTGTCACAGTGAAGTGTATGATTGATGGGTTCAATAAAGGACACTGATTGTCA
>XM_021607252.2
TATTCCCAGTCTCTCCAGCATATAAATGCAGCAGCAGCTCTCCAGGGTGAAGCTACCAGCTCTGTGGAGCTCCACTACATCTGATGATCCGGCACTCCACAAGGTCACAACCGCTCTCCTCAGCTCTGACCCGAGGCCCAGGCACAGCCCCTCTTACCTGCCAACTACCATCTGTTCAAGATGGCGACCCGGTGGGGACTCTGCGGTGCGGGGAAGATCAGCCACGACTTCAGTGTGGCCATGAAAACCCTCCCTCCTGGAGACCACCAGATAGTGGCGGTGGCTGCGAGGAGTCTGGAGCGTGCCCGGGAGTTTGCCAAGAAGCACAGCATCCCTAAGGCCTATGGGAGCTATGAAGAGCTGGCCAGCGACCCAGAGATTGACATGGTGTACCTGGGCGTGCTGCACACGGAGCACTGGCGCCTGGGCCTGCTGGTACTCCACGCAGGGAAGAACATGCTGTGTGAGAAGCCCTTTGCCATGAACTCCAGGGAGGTGGGGGACCTCATTGCTGCCTCCAAGAAGTCCAATGTCTTTCTCATGGAGGCCATCTGGTCCCGTTGTTTCCCACTGCACAGGGAGGTTCGCAGGCTGCTGGCTGAGGACGCCATCGGCGACGTAAAGCTGGTGAAGGCCTCTTTTGGCTCCCCTCAGCTTCACATCCCCCGCTCGGTGGAGAAGGAGCTTGGAGGAGGCGCTCTGCTGGACATTGGGGTCTACACCTTGCAGTTTGTGTTGATGGTGTTCAACGGGGAGAGGCCAGAGTCCATCCATGCCACTGGAGTTCTTCTCAACTCAGGAGTGGATGAGtccatggtggtggtgatgaagtTTCCCAGGAACAGGCTGGCTTGCTGTTTCTTCTCCATCGCTGTTTCACTGCCTAACGACGCCACCATCAGCGGAACAACGGGCACCATCAGGGTTCTAGGTCCCATGCATTGTCCCACCACACTGGAGGTGAATGGGAAGACGACACAGTACCCCCTGCCGGAGCCCTCCTTACCTCTGAACTTCACAAACAGCACTGGGCTGCGCTACGAGGCTGAGGAAGTCAGGCAGTGCCTGCTCAAAGGACTGAAGGAGAGCCCCAGAATGCCCCTGTCTGAGTCGGCCCTGCTCACTGAGGTTATGGATGAGTGCAGGAAACAAGTGGGAGTGGTCTTCAACCAGGACCGCCAATAACCACCCCTCACTCGCCACTCGACCATAGTCCATCTGACCTGTGCCACAGGACCTGGACATGGACAGAGCTGTttgaggcaggagagagggatcaAGCCATGAGTGTATATGATCCCCTCACGACTTAGCCCTATACAGCTTGCACCTGATGTGAGACAAATTTGAACACGATGACGATAAAGACAAGGAAGCCTGAGTTGATTAGTAGGCTACTGTGAGCTGCTAAGACTGACAGGTTAAATTAAGAGTACCAAAATCTGTCACAGTGAAGTGTATGATTGATGGGTTCAATAAAGGACACTGATTGTCA

Function

symbol description
dhdh Predicted to enable D-xylose 1-dehydrogenase (NADP+) activity. Predicted to be involved in D-xylose catabolic process.

NR:

description
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase-like isoform X2

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K00078 DHDH; dihydrodiol dehydrogenase / D-xylose 1-dehydrogenase (NADP)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607251.2 False 1545 mRNA 0.56 7 65103224 65106320
XM_021607252.2 True 1495 mRNA 0.56 7 65103226 65106320

Neighbor

gene id symbol gene type direction distance location
LOC110526349 LOC106587217 coding upstream 141077 64899801 ~ 64962147 (+)
LOC110526348 NA coding upstream 208109 64891686 ~ 64895115 (+)
LOC118936302 NA coding upstream 219088 64881722 ~ 64884136 (+)
LOC110526346 NA coding upstream 245039 64854976 ~ 64858185 (+)
chrna5 LOC106587222 coding upstream 252126 64832624 ~ 64851098 (+)
dhdh.2 LOC106587215 coding downstream 389 65106709 ~ 65113071 (+)
LOC110526356 LOC106587213 coding downstream 33560 65065380 ~ 65178884 (+)
LOC110526357 LOC106587212 coding downstream 87339 65193659 ~ 65368577 (+)
LOC110526358 LOC106587209 coding downstream 297288 65403608 ~ 65407275 (+)
LOC110526359 LOC106587211 coding downstream 307969 65414289 ~ 65430400 (+)
G534532 NA non-coding upstream 135220 64967797 ~ 64968004 (+)
G534530 NA non-coding upstream 138682 64964302 ~ 64964542 (+)
G534510 NA non-coding upstream 138982 64962439 ~ 64964242 (+)
G534509 NA non-coding upstream 145455 64956530 ~ 64957769 (+)
G534449 NA non-coding upstream 298361 64785620 ~ 64804863 (+)
G534653 NA non-coding downstream 6960 65113280 ~ 65169563 (+)
G534764 NA non-coding downstream 67155 65173475 ~ 65173701 (+)
G534767 NA non-coding downstream 73143 65179463 ~ 65179673 (+)
G534768 NA non-coding downstream 73963 65180283 ~ 65180487 (+)
G534769 NA non-coding downstream 74191 65180511 ~ 65180847 (+)
G534453 NA other upstream 256120 64790322 ~ 64847104 (+)
LOC110526344 LOC106587225 other upstream 326888 64769099 ~ 64781704 (+)
G532489 NA other upstream 1759469 63308533 ~ 63343755 (+)
LOC100750227 LOC106587244 other upstream 1763726 63338236 ~ 63549030 (+)
G532237 LOC106591742 other upstream 1904490 63032931 ~ 63198734 (+)
G535150 LOC106587155 other downstream 741303 65847623 ~ 65849441 (+)
G536406 NA other downstream 1496465 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 1906900 67013220 ~ 67018653 (+)

Expression


Co-expression Network