dhdh.2 (LOC106587215)


Basic Information

Item Value
gene id dhdh.2
gene name LOC106587215
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 65106709 ~ 65113071 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607253.2
CACCACCAAACCTCGGTCTTTTATGGGTGTAAAATGGCACgttgatgccatctgttggtaaatgtacGTTACTGCAACACCAGTGTTATATAACGTGTGTGCCTCATATACCCGGATGTATTTGTAATATTCCGAACACGGCTGGTTGGTTCATCAAAACAGAGTCTGTCTCCACCTGCTGGCTAATAGTTACATGTTTTCTACGCCAATATGGCAACCAGGTGGGGAATCTGTAGCGCCGGGAAAATCAGCCATGATTTCACAGTGGCACTGAAAACCCTCCCTCCCGGAGACCATCAGATTGTTGCTGTGGCAGCACGGAAACTACAGGACGCTGAGGCGTTTGCAAAGAAGCACAGCATCCCTCAAGCCTATGGCAGCTATGAGGAACTGGCCAGAGATCCAGAGATTGATGTGGTATATGTGGGCACCATCCACCCATACCACCTGCCAGTTGGCATGCTCTTCATGAAGGCCCAGAAGAATGTGCTGTGTGAGAAGCCTATGGCCATGAACCTCAGAGAGGTACAAGAGCTGGTGGCCTCTGCTAAGATGAACAAAGTCTTTCTGATGGAGGCAGTGTGGACCCGCTTCTTCCCAGCTTCTCTGGAGATCGAGCGCCTGCTGTCTCGGGGGGAGGTGGGTGAGGTGAAGATGGTAAAGGCAGACTTTGGGGTGCCCCTCATGCACGTGCCCAGAGCGGTGGAGAAGGAGCTGGGAGGAGGGGCGCTGCTGGACATCGGCATCTACTGCCTGCAGTTTATATGCATGGTGTACAATGGAGAGAAGCCTGAGTGCATCCAAGCCACCGGTGTCTGTCTGGACACAGGTGTGGATGAAGGCATGGTGGTCACCCTGAAGTTCTCCAGGAACAGAATGGCAGTGTTCACCTGCTCTATTGCTGTGGAGCTTCCCAACGACGCTGTTATCATTGGCACCAAGGGAACCATCAGGGTTCCTGAGCACATATGGTGTCCTACCTCCCTGGTGGTGAATGGGAAGGAGATTCAATACACTCTGCCTGAGCCCTACCTGCCCCTCAACTTCATCAACAGCACTGGGATGCGCTATGAGGCAGAGGAGGTGCGCCAGTGCCTGCTCAAAGGCCTGAAGGAGAGCCCCAGGATGTCCCAGGCAGACTCTCTGCTCCTGGCTGAGGTGATGGATGAGGCACGCAGGCAGGTGGGAGTGGTTTACAGCCAGGACCACCAGTGACCAACAGACCTTTGTTTAATAAAATGATCCACTAAATGGTCTTTGTCATCAAAACA

Function

NR:

description
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K00078 DHDH; dihydrodiol dehydrogenase / D-xylose 1-dehydrogenase (NADP)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607253.2 True 1271 mRNA 0.53 7 65106709 65113071

Neighbor

gene id symbol gene type direction distance location
LOC110526353 dhdh coding upstream 389 65103224 ~ 65106320 (+)
LOC110526349 LOC106587217 coding upstream 144562 64899801 ~ 64962147 (+)
LOC110526348 NA coding upstream 211594 64891686 ~ 64895115 (+)
LOC118936302 NA coding upstream 222573 64881722 ~ 64884136 (+)
LOC110526346 NA coding upstream 248524 64854976 ~ 64858185 (+)
LOC110526356 LOC106587213 coding downstream 26809 65065380 ~ 65178884 (+)
LOC110526357 LOC106587212 coding downstream 80588 65193659 ~ 65368577 (+)
LOC110526358 LOC106587209 coding downstream 290537 65403608 ~ 65407275 (+)
LOC110526359 LOC106587211 coding downstream 301218 65414289 ~ 65430400 (+)
LOC110526360 LOC106587210 coding downstream 321340 65434411 ~ 65440976 (+)
G534532 NA non-coding upstream 138705 64967797 ~ 64968004 (+)
G534530 NA non-coding upstream 142167 64964302 ~ 64964542 (+)
G534510 NA non-coding upstream 142467 64962439 ~ 64964242 (+)
G534509 NA non-coding upstream 148940 64956530 ~ 64957769 (+)
G534449 NA non-coding upstream 301846 64785620 ~ 64804863 (+)
G534653 NA non-coding downstream 209 65113280 ~ 65169563 (+)
G534764 NA non-coding downstream 60404 65173475 ~ 65173701 (+)
G534767 NA non-coding downstream 66392 65179463 ~ 65179673 (+)
G534768 NA non-coding downstream 67212 65180283 ~ 65180487 (+)
G534769 NA non-coding downstream 67440 65180511 ~ 65180847 (+)
G534453 NA other upstream 259605 64790322 ~ 64847104 (+)
LOC110526344 LOC106587225 other upstream 330373 64769099 ~ 64781704 (+)
G532489 NA other upstream 1762954 63308533 ~ 63343755 (+)
LOC100750227 LOC106587244 other upstream 1767211 63338236 ~ 63549030 (+)
G532237 LOC106591742 other upstream 1907975 63032931 ~ 63198734 (+)
G535150 LOC106587155 other downstream 734552 65847623 ~ 65849441 (+)
G536406 NA other downstream 1489714 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 1900149 67013220 ~ 67018653 (+)

Expression


Co-expression Network