LOC110526366 (LOC106587204)


Basic Information

Item Value
gene id LOC110526366
gene name LOC106587204
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 65768783 ~ 65771390 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607273.2
GTAGAGACTATTAGCACAGTGTCACAGCTGCCTTTCAGCACCAACAGCAACTTCAAGAAGCCTTTGGAATActctctccacattgactctactaTAACTACTTTATCACCCAAGTGAATTATTGAAGGATTTCAGGTACCAGTCAAAATGAAACTGATCCTGCAGTCTTTCCTCTACGGCTGTCTGCTGGCCACCATTGCACAGAGTGTGGCTGGATTCCAATTTGAAATTAGCCCAGAGCTCAAAAAGAGGTTAAGCATATGGATGCAGAGCAGATTGAGACGAGATCTAAACAGTTTTTCTGCAGAGAGGATAGCAGAGTCTGTACAGTTTGTCAGCCCAGAAGACGTCAGGGACACCCTGATTCCTCATTCCAGcaCTGACATCAGTGTCCGAACCAAGAGGTCCAAAAATTCAGTGAACCAGGCCTGGAGACCGGGCTGCTCTCTGGGCACCTGCACTGTGCACGACCTGGCCCACCGCATCCACCAGCTCAACAACAAGCTAAAGATTGGTAGTGCACCCATCGACAAGATCAGCCCACATGGCTATGGCCGTAGGCGTCGTTCCCTCCCTGAGCGCAGGGCCACACTGAGGCTGGAGGGAGGCAGGCTGAGGCCTGTGTGGGGCAACACAGACTCACACGTTCACAAGCTGGAGGAGCTGCTCAGACGGACATGAGCTGGACTTGTACGGGGgaggaacaggggaggagagCAGCAGCCGAGGCTTAGTGTCTCTGCCCTGTTCTAAAATTCTCCAAATGCCTcagactttttccaaatgttctcCAGTGCATTTTTTCCAGACGTGAGTACTGAGCGATAGCTGCAGCGCCTCTGGAAGCTGGACTTAGCAGAGGCATTGGCGATGCAGAGCGCCAAAACGACAGCTGGTCTACAGGCACTGGATGGCACcgtgaagagagagaaggagagatgctGAGGATGGTGCTATCTCTGCCCAGCTGTGGGAGAGGAGCAAGGTCAATACAGAGGTACAGACTCAGAGAAGAGTCCACCGCGTAAATACTGGGACTCCATAAACCTGTTATGCAGATCCTGAACTTTGAGTTTTACCCTGTGGATTTACAGGAGCCAATTTCACCGAACCCTCTATACTCATCTGCACTTTTCAGTCCCAGCCTTCTCAGTCAGACATCTACGTGGACCTAAAATATATCCAAAGACATCTGGTCCGTGCCAAACAGGGAGATAAGACATAAGGAGATGGACGTATAATAAAGAGCTATGAAGCTGAAGTTTTTGGTCACTGTATGAGGGAAATGCATTAGAGATTGTATGAAATATCTGTGCCAGTCCACAATGGATGGAACTATACTTGAATATGTTTTGTATAAAACACATGTGCAATCTATGTATGTATATTTTTATTTGCCAGTTTGTATATAAGATATTTCAGATATCATTATTTAAATATTATATAGGTTAGATTCAACTACTTATGGAGATAGAACTATTTTTGTACAGGAAGAAAATATAAGGGCATTGTAACTATTTGTTGTTTCCACTATTGTTTGCATCATGGATGTCATATGTTTCGAACTGTGCTCATAGGATAAATGGTTTTATAGCTATGGTATAATATATTTGTAAATGTGGTCTATTTTATTTGTGTCGAAGCAATTAACATTGTCATACAATAAACATTTTGCATA

Function

NR:

description
ADM-like isoform X1

GO: NA

KEGG:

id description
K12333 ADM; adrenomedullin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607273.2 True 1678 mRNA 0.45 4 65768783 65771390

Neighbor

gene id symbol gene type direction distance location
LOC110526364 LOC106587206 coding upstream 188318 65575069 ~ 65580465 (+)
LOC110526363 LOC106587208 coding upstream 247185 65441092 ~ 65521598 (+)
LOC110526360 LOC106587210 coding upstream 327885 65434411 ~ 65440976 (+)
LOC110526359 LOC106587211 coding upstream 338383 65414289 ~ 65430400 (+)
LOC110526358 LOC106587209 coding upstream 361508 65403608 ~ 65407275 (+)
LOC110526368 LOC106587203 coding downstream 3397 65774787 ~ 65792680 (+)
LOC110526370 LOC106562103 coding downstream 62369 65833759 ~ 65843569 (+)
LOC110526373 LOC106587200 coding downstream 177029 65948419 ~ 66035381 (+)
LOC110526374 LOC100196685 coding downstream 313729 66085119 ~ 66098315 (+)
dkk3a LOC106562112 coding downstream 556341 66327731 ~ 66332554 (+)
G535020 NA non-coding upstream 126353 65635658 ~ 65642430 (+)
G534984 NA non-coding upstream 181876 65586195 ~ 65586907 (+)
G534982 NA non-coding upstream 184264 65584272 ~ 65584519 (+)
G534921 NA non-coding upstream 318761 65449775 ~ 65450022 (+)
G534920 NA non-coding upstream 319090 65449492 ~ 65449693 (+)
G535118 NA non-coding downstream 24644 65796034 ~ 65797422 (+)
G535155 NA non-coding downstream 52979 65824369 ~ 65824684 (+)
G535156 NA non-coding downstream 53607 65824997 ~ 65825435 (+)
G535158 LOC106562099 non-coding downstream 55987 65827377 ~ 65827923 (+)
G535162 NA non-coding downstream 59645 65831035 ~ 65831237 (+)
LOC110526356 LOC106587213 other upstream 607453 65065380 ~ 65178884 (+)
G534653 NA other upstream 650827 65113280 ~ 65169563 (+)
G534453 NA other upstream 921679 64790322 ~ 64847104 (+)
LOC110526344 LOC106587225 other upstream 992447 64769099 ~ 64781704 (+)
LOC100750227 LOC106587244 other upstream 2429285 63338236 ~ 63549030 (+)
G535150 LOC106587155 other downstream 76233 65847623 ~ 65849441 (+)
G536406 NA other downstream 831395 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 1241830 67013220 ~ 67018653 (+)
G537029 zfhx3 other downstream 1332916 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 1338286 67109676 ~ 67110628 (+)

Expression


Co-expression Network