LOC110526369 (xlkd1)


Basic Information

Item Value
gene id LOC110526369
gene name xlkd1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 65792819 ~ 65795668 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607286.2
GTTCGTGGTGGTTCCGTGGCCATGTCAGCACCTCGTCTAACTCGTCATTTATGCAACAGCCTTGTTTACTTCATGAACCCACCCTTCTGATCTGAAGAGAATCACCTCTCACTAACCTCTTCATTTTggctcacagacacacagtggAACACTTGTCACCCCAGTAGCTTCCAGTCCTGTGTCTCTGACCATTGGTAACCATGATGCAGGTTTGGATACTCTCACTACTGCTGCCTCTCACACTGTCATTCTCTGGTCTACATGTTGATCCTAGCAAAATTCATGCTTTCCCAGAGAGACACATAGCTGGGGTGTTTCTGGTCAGCTACACAAATGACCTCAACCAGTTTGCCTATTCCTTTAATGCCTCTGAGGCAAGGGAGGTGTGCTGGTCTCTGGGTGTAACCATGGCCTCCAATTCCCAGGTTGAGGAGGCTCAGAGACTGGGCTTGGAAACATGCAGGTTTGGGTGGATTGATGAACATTTTGCAGTGATCCCTCGTATTGAGGCCAGTAAAACCTGTGGTCAAAACCAGACCGGTGTCATCAAATGGAGAGCCTCTGTCACCAAACTTTTTGATGTGTTCTGCTTCAATGCTTCAGGAGCGGCCtcacccccctctacctccctctctccagccatCATTCATCTTGTCCCTTCCACACAGTCCGCACGGCCCACCTCTCATTCTcgctcctcccttctctctctcagtagttTTTCTGATAACCcagaggaggtagaggtagaacTACCCCAGTCCATGAGCAGTGCAAAGTCTTCAATTGGAGCGGTGCCAAAAGCATTACTTATCACCTCGGCCATTGTTCTTCTTCTGACTGCAATGGCCGTTCTCTTGTACTTCAGAACGATCAATGGCCTCAAGACTATTCTCCTCTGCTGGGATGGGGAGCAGCAGAACGAGTACATTGAGACAGAGGAGTGTGCAGCACACACCTGTATGAAGGACACAAAGGAAGCCCAGACTAAGGGAGTAGCtaaggctgaggctgaggctgaggaGGATGTGTGCAAAGAGACCGCCAGTGACATCAGTGTGAACATCAGTGATGAGACCAACACTGATTCAGCATCAGAGACAAAACCTTGATGCTTTAGATTATGTAAAACCAAAGATAAGGTCAGGCTGCTTTTTTAAAGTTATGTTCCTGCTTATGGAAGTTTTGTTTAGTAGTTTGTACAAAGTGTGCATTGATGTTATTCAAATGCATTTATTTATAGCATGGGATGCCTTTACAATTTTGCTTTACAAAGTGACTTTGTGTCATTCATGTTCAAAATAGATTGTTCTAGAGATCATCCTATATTCTAACCACTAGATGgcgatgtcatcaaggcaattaTCGCTGCAGCTTGGATGAGTTGAGTAGCTGAATTGAAAATGGGTTCATATTTTCTGCTATACAGATTAATTTGATGACTTCAGATAAAGTTAGTCAGTATGCCATGGCCATTGCATGTTAAATCATGTGTTTTAACTAATGCCAATCTTGAACTGATGCAATAAATTCAAACATTTGTTTCCCTGC

Function

NR:

description
lymphatic vessel endothelial hyaluronic acid receptor 1-like

GO:

id name namespace
GO:0007155 cell adhesion biological_process
GO:0005540 hyaluronic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607286.2 True 1551 mRNA 0.45 6 65792819 65795668

Neighbor

gene id symbol gene type direction distance location
LOC110526365 LOC106587205 coding downstream 27437 65600097 ~ 65765382 (-)
LOC110526361 LOC106587207 coding downstream 246371 65525672 ~ 65546448 (-)
LOC110526352 LOC106587214 coding downstream 658994 65113278 ~ 65133825 (-)
LOC110526350 LOC106562128 coding downstream 819052 64958215 ~ 64973767 (-)
LOC118965085 LOC106587172 coding downstream 894271 64897435 ~ 64898548 (-)
LOC110526367 LOC106587202 coding upstream 2405 65798073 ~ 65820337 (-)
LOC110526945 LOC106562099 coding upstream 31261 65826929 ~ 65828077 (-)
LOC110526372 LOC106587155 coding upstream 49290 65844958 ~ 65851082 (-)
LOC100499618 LOC106587199 coding upstream 302649 66098317 ~ 66122139 (-)
LOC110526375 LOC106587197 coding upstream 383958 66179626 ~ 66181802 (-)
G535798 NA non-coding downstream 194009 65598469 ~ 65598810 (-)
G535796 NA non-coding downstream 196325 65596266 ~ 65596494 (-)
G535791 NA non-coding downstream 206188 65586323 ~ 65586631 (-)
G535714 NA non-coding downstream 237838 65499956 ~ 65554981 (-)
G535731 NA non-coding downstream 263759 65491091 ~ 65529060 (-)
G535905 NA non-coding upstream 321 65795989 ~ 65797435 (-)
G535925 ctr9 non-coding upstream 45041 65840709 ~ 65842247 (-)
G535934 NA non-coding upstream 63360 65859028 ~ 65859247 (-)
G535938 NA non-coding upstream 76608 65872276 ~ 65872479 (-)
G535946 NA non-coding upstream 87186 65882854 ~ 65883080 (-)
G534603 NA other downstream 907287 64855495 ~ 64895099 (-)
G534349 NA other downstream 1178023 64578798 ~ 64614796 (-)
G534201 NA other downstream 1293205 64498453 ~ 64499614 (-)
igdcc3 LOC106562146 other downstream 1967294 63823887 ~ 63944930 (-)
G536183 NA other upstream 466818 66262486 ~ 66276289 (-)
LOC110526379 LOC106587193 other upstream 481534 66277162 ~ 66326558 (-)
LOC110526387 LOC106587187 other upstream 704720 66499996 ~ 66505055 (-)
G536630 LOC106562092 other upstream 753699 66549367 ~ 66549974 (-)
G538277 NA other upstream 2346583 68142251 ~ 68144907 (-)

Expression


Co-expression Network