LOC110526374 (LOC100196685)


Basic Information

Item Value
gene id LOC110526374
gene name LOC100196685
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 66085119 ~ 66098315 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607292.2
TTGTACAGCCAAATCTCGCGAGAGCGTCTGAGTAGCAGGGACAACATCACTTTTGCCTTTTAGGGGAAAATGCCAAACCAAGATCCATTATTTTACTAACGGATTGGACTGATCCTTTGAATTCCGTGTATATGTTTTGTATAGGCTATATGCTAGTAATGCGAGAATACTTATAATTTAAAAGATTATGAATGGTGAATAATCCAGGTTGGACGTCTCTGTGAACTGGTGATGGCAGCACGTCCACAGTCATATGATAGCAACTCAAGTGACACTGAGAATTGGGAACGAAAAACAACCGACCTCGCAAACTCTGCAAGCACTCGAGTGTGCTTTCTGTTCTGGCCAGCGCTCAGTCGTGTGCATCTCGACTGGAGGCAGACCTGGTGAAGATGAGCCTGCATGGTGCTAGCGGGGGCAATGACCGCTCACGCGACCGCCGCCGCTCCAGCGACCGCTCCCGAGACTCGTCGCACGAGAGGGGAGAGGGCCAGCTCACCCCTTGCATCAGAAATGTCACCTCGCCTACCCGCCAGCACAACAGTGaccGTGAGAGGGACGGTGGCTCCAGGCCCAGCAGCCCCCGTCCTCAGAGGATTTCCCCCAGCGGCTCCAGTAGCAGCGGGCTGGTCAGCAGCCGTAACAGCAGCCTGTCCAGCACTGAGGGCTGCTTTAAGAGCCTGGGGGTGGGAGAGATGGTGTTTGTCTATGAGAATAGCAAGGAGGGACTGGGCACGGGCCTGGGTACCCGCAGCATCCGGACCTCAGGCTCCGAGAGGGTCACTCTTATAGTAGATAACACACGGTTCGTGGTGGACCCTTCAATCTTCACAgcacagcccaacaccatgctgGGCAGAATGTTTGGATCTGGAAGGGAACACAATTTCACACGGCCCAATGAAAAAGGAGAGTATGAAGTCGCCGAAGGCATCAGCTCTACGGTGTTCCGAGCCATCCTGGATTACTACAAGTCTGGAATAATCCGTTGCCCCGATGGAATCTCCATCCCTGAGCTGAGGGAGGCATGTGACTATCTGTGCATCACCTTTGACTACAGCACCATCAAGTGCAGAGACCTCAGTGCCCTCATGCATGAGCTATCTAACGATGGTGCCCGGCGTCAGTTTGAGTTCTACCTGGAGGAAATGGTTGTGCCTCTGATGGTGGCCAGCGcccagagtggagagagagaatgtcacATCGTGGTGCTCACTGATGATGACGTAGTGGACTGGGACGAAGAGTACCCACCACAGATGGGAGAAGAGTACTCACAGATAATATACAGCACAAAACTATACCGGTTCTTCAAGTATATAGAAAATCGAGATGTTGCCAAATCAGTTTTaaaggagagaggactgaagaAAATAAGATTAGGGATTGAAGGTTACCCCACGTATAAAGAGAAGGTGAAGAAGCGTCCTGGTGGCCGTCCTGAGGTCATCTACAACTACGTCCAGAGGCCCTTCATCCGCATGTcctgggagaaggaggagggcaaGAGCCGCCATGTTGACTTCCAGTGTGTCAAAAGCAAGTCCATCACTAACCTGGCTGCAGCTGCTGCAGATATCCCCCAGGACCAGCTGGTCAACATGCACCCTGGCCCTCAGGTGGACGAGCTGGACATCCTCCCTAACCAGTCCCCCAGTGGACCCCAGTACAGCTACAACAACGATGCTGGTGACCCAGATGCCCCCTCTCCTGCAGTCTGAGGACTGCCCCCTCCCTGACACCTCCCTCCCCAGCGTACTGCAGCATGGAGCAAGAGGGGGATCAATATAAAGGGGATCATAACCATATTGCCTTGGCACCTCCTCCACAGCCTTAGAGCCTCAAGGATCTGGTCGACTGGTAAAAACCCTATAAGGGACAAGACTGGCAAAAGGGCATATCTCtttatttctttaaaaaaatacttgACCAAAGGAATTTATTTTTCTGTTAATTGTTTGAAATTTTTTTAGCAAACCCAATTATTTTGTAGCTATTATTActaatatattattatttacaatggttATCGGGCTGTGCACTGTGTGGTGTTACTGTGTCCTCCCCCTGAGTTTTATTTCACGTGTGGTTCTGGGTATACTTCCTGGATGGCAAGACTAGTGAATACTGTATATTTTTGGGGAACAGGTGCAGATCGTGATGCCTGGCCATGGAGAAAATCCTCTGATTTCATCACCATTCAGTGGAAATTACTGTTGAATTCCCCTCAGATATACTTTGAATCATGTAATGGTTGTGTTGGTTGACATCATAGGATTGGTAATGGGATTCTGTGCTCCCTGGATATTCAGCATGACATAAAGACATTAAAATCA
>XM_021607293.2
TTGTACAGCCAAATCTCGCGAGAGCGTCTGAGTAGCAGGGACAACATCACTTTTGCCTTTTAGGGGAAAATGCCAAACCAAGATCCATTATTTTACTAACGGATTGGACTGATCCTTTGAATTCCGTGTATATGTTTTGTATAGGCTATATGCTAGTAATGCGAGAATACTTATAATTTAAAAGATTATGAATGGTGAATAATCCAGGTTGGACGTCTCTGTGAACTGGTGATGGCAGCACGTCCACAGTCATATGATAGCAACTCAAGTGACACTGAGAATTGGGAACGAAAAACAACCGACCTCGCAAACTCTGCAAGCACTCGAGCGCTCAGTCGTGTGCATCTCGACTGGAGGCAGACCTGGTGAAGATGAGCCTGCATGGTGCTAGCGGGGGCAATGACCGCTCACGCGACCGCCGCCGCTCCAGCGACCGCTCCCGAGACTCGTCGCACGAGAGGGGAGAGGGCCAGCTCACCCCTTGCATCAGAAATGTCACCTCGCCTACCCGCCAGCACAACAGTGaccGTGAGAGGGACGGTGGCTCCAGGCCCAGCAGCCCCCGTCCTCAGAGGATTTCCCCCAGCGGCTCCAGTAGCAGCGGGCTGGTCAGCAGCCGTAACAGCAGCCTGTCCAGCACTGAGGGCTGCTTTAAGAGCCTGGGGGTGGGAGAGATGGTGTTTGTCTATGAGAATAGCAAGGAGGGACTGGGCACGGGCCTGGGTACCCGCAGCATCCGGACCTCAGGCTCCGAGAGGGTCACTCTTATAGTAGATAACACACGGTTCGTGGTGGACCCTTCAATCTTCACAgcacagcccaacaccatgctgGGCAGAATGTTTGGATCTGGAAGGGAACACAATTTCACACGGCCCAATGAAAAAGGAGAGTATGAAGTCGCCGAAGGCATCAGCTCTACGGTGTTCCGAGCCATCCTGGATTACTACAAGTCTGGAATAATCCGTTGCCCCGATGGAATCTCCATCCCTGAGCTGAGGGAGGCATGTGACTATCTGTGCATCACCTTTGACTACAGCACCATCAAGTGCAGAGACCTCAGTGCCCTCATGCATGAGCTATCTAACGATGGTGCCCGGCGTCAGTTTGAGTTCTACCTGGAGGAAATGGTTGTGCCTCTGATGGTGGCCAGCGcccagagtggagagagagaatgtcacATCGTGGTGCTCACTGATGATGACGTAGTGGACTGGGACGAAGAGTACCCACCACAGATGGGAGAAGAGTACTCACAGATAATATACAGCACAAAACTATACCGGTTCTTCAAGTATATAGAAAATCGAGATGTTGCCAAATCAGTTTTaaaggagagaggactgaagaAAATAAGATTAGGGATTGAAGGTTACCCCACGTATAAAGAGAAGGTGAAGAAGCGTCCTGGTGGCCGTCCTGAGGTCATCTACAACTACGTCCAGAGGCCCTTCATCCGCATGTcctgggagaaggaggagggcaaGAGCCGCCATGTTGACTTCCAGTGTGTCAAAAGCAAGTCCATCACTAACCTGGCTGCAGCTGCTGCAGATATCCCCCAGGACCAGCTGGTCAACATGCACCCTGGCCCTCAGGTGGACGAGCTGGACATCCTCCCTAACCAGTCCCCCAGTGGACCCCAGTACAGCTACAACAACGATGCTGGTGACCCAGATGCCCCCTCTCCTGCAGTCTGAGGACTGCCCCCTCCCTGACACCTCCCTCCCCAGCGTACTGCAGCATGGAGCAAGAGGGGGATCAATATAAAGGGGATCATAACCATATTGCCTTGGCACCTCCTCCACAGCCTTAGAGCCTCAAGGATCTGGTCGACTGGTAAAAACCCTATAAGGGACAAGACTGGCAAAAGGGCATATCTCtttatttctttaaaaaaatacttgACCAAAGGAATTTATTTTTCTGTTAATTGTTTGAAATTTTTTTAGCAAACCCAATTATTTTGTAGCTATTATTActaatatattattatttacaatggttATCGGGCTGTGCACTGTGTGGTGTTACTGTGTCCTCCCCCTGAGTTTTATTTCACGTGTGGTTCTGGGTATACTTCCTGGATGGCAAGACTAGTGAATACTGTATATTTTTGGGGAACAGGTGCAGATCGTGATGCCTGGCCATGGAGAAAATCCTCTGATTTCATCACCATTCAGTGGAAATTACTGTTGAATTCCCCTCAGATATACTTTGAATCATGTAATGGTTGTGTTGGTTGACATCATAGGATTGGTAATGGGATTCTGTGCTCCCTGGATATTCAGCATGACATAAAGACATTAAAATCA
>XM_036980729.1
TTGTACAGCCAAATCTCGCGAGAGCGTCTGAGTAGCAGGGACAACATCACTTTTGCCTTTTAGGGGAAAATGCCAAACCAAGATCCATTATTTTACTAACGGATTGGACTGATCCTTTGAATTCCGTGTATATGTTTTGTATAGGCTATATGCTAGTAATGCGAGAATACTTATAATTTAAAAGTGTGCTTTCTGTTCTGGCCAGCGCTCAGTCGTGTGCATCTCGACTGGAGGCAGACCTGGTGAAGATGAGCCTGCATGGTGCTAGCGGGGGCAATGACCGCTCACGCGACCGCCGCCGCTCCAGCGACCGCTCCCGAGACTCGTCGCACGAGAGGGGAGAGGGCCAGCTCACCCCTTGCATCAGAAATGTCACCTCGCCTACCCGCCAGCACAACAGTGaccGTGAGAGGGACGGTGGCTCCAGGCCCAGCAGCCCCCGTCCTCAGAGGATTTCCCCCAGCGGCTCCAGTAGCAGCGGGCTGGTCAGCAGCCGTAACAGCAGCCTGTCCAGCACTGAGGGCTGCTTTAAGAGCCTGGGGGTGGGAGAGATGGTGTTTGTCTATGAGAATAGCAAGGAGGGACTGGGCACGGGCCTGGGTACCCGCAGCATCCGGACCTCAGGCTCCGAGAGGGTCACTCTTATAGTAGATAACACACGGTTCGTGGTGGACCCTTCAATCTTCACAgcacagcccaacaccatgctgGGCAGAATGTTTGGATCTGGAAGGGAACACAATTTCACACGGCCCAATGAAAAAGGAGAGTATGAAGTCGCCGAAGGCATCAGCTCTACGGTGTTCCGAGCCATCCTGGATTACTACAAGTCTGGAATAATCCGTTGCCCCGATGGAATCTCCATCCCTGAGCTGAGGGAGGCATGTGACTATCTGTGCATCACCTTTGACTACAGCACCATCAAGTGCAGAGACCTCAGTGCCCTCATGCATGAGCTATCTAACGATGGTGCCCGGCGTCAGTTTGAGTTCTACCTGGAGGAAATGGTTGTGCCTCTGATGGTGGCCAGCGcccagagtggagagagagaatgtcacATCGTGGTGCTCACTGATGATGACGTAGTGGACTGGGACGAAGAGTACCCACCACAGATGGGAGAAGAGTACTCACAGATAATATACAGCACAAAACTATACCGGTTCTTCAAGTATATAGAAAATCGAGATGTTGCCAAATCAGTTTTaaaggagagaggactgaagaAAATAAGATTAGGGATTGAAGGTTACCCCACGTATAAAGAGAAGGTGAAGAAGCGTCCTGGTGGCCGTCCTGAGGTCATCTACAACTACGTCCAGAGGCCCTTCATCCGCATGTcctgggagaaggaggagggcaaGAGCCGCCATGTTGACTTCCAGTGTGTCAAAAGCAAGTCCATCACTAACCTGGCTGCAGCTGCTGCAGATATCCCCCAGGACCAGCTGGTCAACATGCACCCTGGCCCTCAGGTGGACGAGCTGGACATCCTCCCTAACCAGTCCCCCAGTGGACCCCAGTACAGCTACAACAACGATGCTGGTGACCCAGATGCCCCCTCTCCTGCAGTCTGAGGACTGCCCCCTCCCTGACACCTCCCTCCCCAGCGTACTGCAGCATGGAGCAAGAGGGGGATCAATATAAAGGGGATCATAACCATATTGCCTTGGCACCTCCTCCACAGCCTTAGAGCCTCAAGGATCTGGTCGACTGGTAAAAACCCTATAAGGGACAAGACTGGCAAAAGGGCATATCTCtttatttctttaaaaaaatacttgACCAAAGGAATTTATTTTTCTGTTAATTGTTTGAAATTTTTTTAGCAAACCCAATTATTTTGTAGCTATTATTActaatatattattatttacaatggttATCGGGCTGTGCACTGTGTGGTGTTACTGTGTCCTCCCCCTGAGTTTTATTTCACGTGTGGTTCTGGGTATACTTCCTGGATGGCAAGACTAGTGAATACTGTATATTTTTGGGGAACAGGTGCAGATCGTGATGCCTGGCCATGGAGAAAATCCTCTGATTTCATCACCATTCAGTGGAAATTACTGTTGAATTCCCCTCAGATATACTTTGAATCATGTAATGGTTGTGTTGGTTGACATCATAGGATTGGTAATGGGATTCTGTGCTCCCTGGATATTCAGCATGACATAAAGACATTAAAATCA
>XM_036980728.1
TTTTATCTTGAAGGCTacccgcaaattccactattgtggccaATCCTTACTGTGGCCAGTTTCACATAGGTAGCCACTGCCTGGCTAGCTAAACAAATATATTGCAAGCATTCTAAATCATCTGCTATTTACTAGTTGGGACTGATTATGAATGGTGAATAATCCAGGTTGGACGTCTCTGTGAACTGGTGATGGCAGCACGTCCACAGTCATATGATAGCAACTCAAGTGACACTGAGAATTGGGAACGAAAAACAACCGACCTCGCAAACTCTGCAAGCACTCGAGTGTGCTTTCTGTTCTGGCCAGCGCTCAGTCGTGTGCATCTCGACTGGAGGCAGACCTGGTGAAGATGAGCCTGCATGGTGCTAGCGGGGGCAATGACCGCTCACGCGACCGCCGCCGCTCCAGCGACCGCTCCCGAGACTCGTCGCACGAGAGGGGAGAGGGCCAGCTCACCCCTTGCATCAGAAATGTCACCTCGCCTACCCGCCAGCACAACAGTGaccGTGAGAGGGACGGTGGCTCCAGGCCCAGCAGCCCCCGTCCTCAGAGGATTTCCCCCAGCGGCTCCAGTAGCAGCGGGCTGGTCAGCAGCCGTAACAGCAGCCTGTCCAGCACTGAGGGCTGCTTTAAGAGCCTGGGGGTGGGAGAGATGGTGTTTGTCTATGAGAATAGCAAGGAGGGACTGGGCACGGGCCTGGGTACCCGCAGCATCCGGACCTCAGGCTCCGAGAGGGTCACTCTTATAGTAGATAACACACGGTTCGTGGTGGACCCTTCAATCTTCACAgcacagcccaacaccatgctgGGCAGAATGTTTGGATCTGGAAGGGAACACAATTTCACACGGCCCAATGAAAAAGGAGAGTATGAAGTCGCCGAAGGCATCAGCTCTACGGTGTTCCGAGCCATCCTGGATTACTACAAGTCTGGAATAATCCGTTGCCCCGATGGAATCTCCATCCCTGAGCTGAGGGAGGCATGTGACTATCTGTGCATCACCTTTGACTACAGCACCATCAAGTGCAGAGACCTCAGTGCCCTCATGCATGAGCTATCTAACGATGGTGCCCGGCGTCAGTTTGAGTTCTACCTGGAGGAAATGGTTGTGCCTCTGATGGTGGCCAGCGcccagagtggagagagagaatgtcacATCGTGGTGCTCACTGATGATGACGTAGTGGACTGGGACGAAGAGTACCCACCACAGATGGGAGAAGAGTACTCACAGATAATATACAGCACAAAACTATACCGGTTCTTCAAGTATATAGAAAATCGAGATGTTGCCAAATCAGTTTTaaaggagagaggactgaagaAAATAAGATTAGGGATTGAAGGTTACCCCACGTATAAAGAGAAGGTGAAGAAGCGTCCTGGTGGCCGTCCTGAGGTCATCTACAACTACGTCCAGAGGCCCTTCATCCGCATGTcctgggagaaggaggagggcaaGAGCCGCCATGTTGACTTCCAGTGTGTCAAAAGCAAGTCCATCACTAACCTGGCTGCAGCTGCTGCAGATATCCCCCAGGACCAGCTGGTCAACATGCACCCTGGCCCTCAGGTGGACGAGCTGGACATCCTCCCTAACCAGTCCCCCAGTGGACCCCAGTACAGCTACAACAACGATGCTGGTGACCCAGATGCCCCCTCTCCTGCAGTCTGAGGACTGCCCCCTCCCTGACACCTCCCTCCCCAGCGTACTGCAGCATGGAGCAAGAGGGGGATCAATATAAAGGGGATCATAACCATATTGCCTTGGCACCTCCTCCACAGCCTTAGAGCCTCAAGGATCTGGTCGACTGGTAAAAACCCTATAAGGGACAAGACTGGCAAAAGGGCATATCTCtttatttctttaaaaaaatacttgACCAAAGGAATTTATTTTTCTGTTAATTGTTTGAAATTTTTTTAGCAAACCCAATTATTTTGTAGCTATTATTActaatatattattatttacaatggttATCGGGCTGTGCACTGTGTGGTGTTACTGTGTCCTCCCCCTGAGTTTTATTTCACGTGTGGTTCTGGGTATACTTCCTGGATGGCAAGACTAGTGAATACTGTATATTTTTGGGGAACAGGTGCAGATCGTGATGCCTGGCCATGGAGAAAATCCTCTGATTTCATCACCATTCAGTGGAAATTACTGTTGAATTCCCCTCAGATATACTTTGAATCATGTAATGGTTGTGTTGGTTGACATCATAGGATTGGTAATGGGATTCTGTGCTCCCTGGATATTCAGCATGACATAAAGACATTAAAATCA

Function

NR:

description
LOW QUALITY PROTEIN: BTB/POZ domain-containing protein 10-like

GO: NA

KEGG:

id description
K10482 BTBD10; BTB/POZ domain-containing protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607292.2 False 2336 mRNA 0.50 9 66085119 66098315
XM_021607293.2 False 2315 mRNA 0.50 9 66085119 66098315
XM_036980729.1 False 2192 mRNA 0.50 8 66085119 66098315
XM_036980728.1 True 2296 mRNA 0.50 9 66092682 66098315

Neighbor

gene id symbol gene type direction distance location
LOC110526373 LOC106587200 coding upstream 49738 65948419 ~ 66035381 (+)
LOC110526370 LOC106562103 coding upstream 241550 65833759 ~ 65843569 (+)
LOC110526368 LOC106587203 coding upstream 292439 65774787 ~ 65792680 (+)
LOC110526366 LOC106587204 coding upstream 313729 65768783 ~ 65771390 (+)
LOC110526364 LOC106587206 coding upstream 504654 65575069 ~ 65580465 (+)
dkk3a LOC106562112 coding downstream 229416 66327731 ~ 66332554 (+)
pkd1l2a LOC106587186 coding downstream 362408 66460723 ~ 66500000 (+)
LOC110526388 LOC106587185 coding downstream 408596 66506911 ~ 66565353 (+)
LOC110526389 LOC106587184 coding downstream 477175 66575490 ~ 66591573 (+)
LOC110526391 LOC106587183 coding downstream 494266 66592581 ~ 66596719 (+)
G535194 NA non-coding upstream 154718 65897509 ~ 65930401 (+)
G535182 NA non-coding upstream 202107 65882726 ~ 65883012 (+)
G535177 NA non-coding upstream 207875 65876943 ~ 65877244 (+)
G535176 NA non-coding upstream 208198 65876668 ~ 65876921 (+)
G535151 NA non-coding upstream 238862 65844972 ~ 65846257 (+)
G535358 NA non-coding downstream 48270 66146585 ~ 66146855 (+)
G536174 NA non-coding downstream 158369 66256684 ~ 66261444 (+)
G536188 NA non-coding downstream 178236 66276551 ~ 66276752 (+)
G536192 NA non-coding downstream 184762 66283077 ~ 66284653 (+)
G536218 NA non-coding downstream 234394 66332709 ~ 66334248 (+)
G535150 LOC106587155 other upstream 235678 65847623 ~ 65849441 (+)
LOC110526356 LOC106587213 other upstream 923789 65065380 ~ 65178884 (+)
G534653 NA other upstream 967163 65113280 ~ 65169563 (+)
G534453 NA other upstream 1238015 64790322 ~ 64847104 (+)
LOC110526344 LOC106587225 other upstream 1308783 64769099 ~ 64781704 (+)
G536406 NA other downstream 504470 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 914905 67013220 ~ 67018653 (+)
G537029 zfhx3 other downstream 1005991 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 1011361 67109676 ~ 67110628 (+)
G537606 NA other downstream 1656241 67754556 ~ 67756618 (+)

Expression


Co-expression Network