dkk3a (LOC106562112)


Basic Information

Item Value
gene id dkk3a
gene name LOC106562112
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 66327731 ~ 66332554 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607323.2
ACCGACCCTCCTCCATTCGCCGCATCCTCCCACAGCCTGCTGCCGCTGGCCCAGAATAGGCTCGCCTCTGGCGCCACTATGAAAGAGTGCAGCAGCAGCACCGCACACACCCAATGCGCAGAGGCAACGTCCAAAGAACCTAATTCATTCTGGTGCCTTTTCGTGCAGCAGCAAGGATGTTGTATTTCTCTCTTCTAACCCTGGGCCTAACGTCTATCCATGGCATCCTCCTTCCTGAATCTGCCAGGCCCGTGGATTTGGACATCAACCAGATCCTTGGGGATAATATGGCACAAGGACACACGACATTAAACGACATGTTTGAGGAGGTAGAGCAACTGATGGAGGACACGCATAATAAACTGGATGACTCGGTGCACCAGgagacagacaacagaacagaagagacCCACATCACCAGAACGGTTATCCAGTCCAGTGGCAAGGAAAATAATATTAATCATGAGTGTATCATTGATGAGGATTGTGAGAAGGGGAAATATTGCCGGTATGAGACCCACCGATCCAAGTGTCTAACCTGCAAAGCCCTCGACGTGccctgcaAAAAGAATGAGGAGTGCTGTAcaggacagctgtgtgtgtggggccaGTGCAGCCAGAACGCCACTAAGGGGGAAGCTGGCAGCATCTGCCAATACCAGAACGACTGCAGCCCAGACCTCTGTTGTGCTTTCCATAAAGCCCTGCAGTTCCCTGTGTGCACGGCCAAGCCAATAGAGCGTGAGCGCTGTCATGGCTCCCCCAACCACCTTATGGAGCTGCTGTCCTGGGACATAGAGGGCCAGGGATCAAGGGAACACTGCCCCTGTGCTGGGGACCTCCAGTGCCAACATCTCGGCCGAGGCTCCCTGTGTCTGAAAAGACAGAACTCGAGTGAAGAGGACCTGACAGACACACTTTATTCAGAAATTGACTATATTGTCTAGGAGTAACCATGCAGCTCAACCTTTTCAGGCCTGTAGACAATCAGATAGAGGGGTCTCCAGTGATTTCAGCCTAGAAAATGAAGTTGCTCACCGTCTCACAAGGCTTACATGTAAGATTCTTCCATCTATAAGCTTGTCATTGTTTATTCAAGCCATTGCAGTTCTCTCTATCTGCTCGAAGTTAACCAAAGCTCTAGATATTACGTAGTGCATAACACCATTATGTATTAGATGAAATGTACATTTTTGGGAAATCCCCAATTCCTAGACGTTTACGCTGTTCAAAGGTAGTGTGTATGATGACTACACTCCAATACCGCAATAAGAGTTCGTGTTTTAACAAATATGtaccctctcctgctctctgatGTCTCACTTATGTGCCTACCCTCAGGATGGATAGTTTGCTGGAGATGCACTGTTGAGGCCCTTTGCTCAAAGGAATTAAGTCAAGTTAGGGACGAAGAAAGAATAAACACAATGCACTGTATACATGTGAAGTAGCTTGCTTAGTCCTGGTTTttgttttaaaatgtgttttaaacAAGAACAGATGAAATTTCTGAATATATGGAGCACTTTGACAGGTCAGCTCATCATGCTCACAACTTGGTAATGGAAACTATAACCCAGACACATGCAGCTTGCACAACTTTCGCTCATAAGAAAATAAAATGCTTTGAAAATGTA
>XM_021607322.2
CCTCCTCCATTCGCCGCATCCTCCCACAGCCTGCTGCCGCTGGCCCAGAATAGGCTCGCCTCTGGCGCCACTATGAAAGAGTGCAGCAGCAGCACCGCACACACCCAATGCGCAGAGGCAACGTCCAAAGAACCTAATTCATTCTGGTGCCTTTTCGTGCAGCAGCAAGGATGTTGTATTTCTCTCTTCTAACCCTGGGCCTAACGTCTATCCATGGCATCCTCCTTCCTGAATCTGCCAGGCCCGTGGATTTGGACATCAACCAGATCCTTGGGGATAATATGGCACAAGGACACACGACATTAAACGACATGTTTGAGGAGGTAGAGCAACTGATGGAGGACACGCATAATAAACTGGATGACTCGGTGCACCAGATGGACAATCAGAGTGCCAAGTCCAGCTTGCATCCCAATAACCTTCCCTCAAATTATCACAACGATAGCACTTCTGAGAGTGTGGTTGAAAACCAATCCATTCACACCATAGAGACAGTACACAAGgagacagacaacagaacagaagagacCCACATCACCAGAACGGTTATCCAGTCCAGTGGCAAGGAAAATAATATTAATCATGAGTGTATCATTGATGAGGATTGTGAGAAGGGGAAATATTGCCGGTATGAGACCCACCGATCCAAGTGTCTAACCTGCAAAGCCCTCGACGTGccctgcaAAAAGAATGAGGAGTGCTGTAcaggacagctgtgtgtgtggggccaGTGCAGCCAGAACGCCACTAAGGGGGAAGCTGGCAGCATCTGCCAATACCAGAACGACTGCAGCCCAGACCTCTGTTGTGCTTTCCATAAAGCCCTGCAGTTCCCTGTGTGCACGGCCAAGCCAATAGAGCGTGAGCGCTGTCATGGCTCCCCCAACCACCTTATGGAGCTGCTGTCCTGGGACATAGAGGGCCAGGGATCAAGGGAACACTGCCCCTGTGCTGGGGACCTCCAGTGCCAACATCTCGGCCGAGGCTCCCTGTGTCTGAAAAGACAGAACTCGAGTGAAGAGGACCTGACAGACACACTTTATTCAGAAATTGACTATATTGTCTAGGAGTAACCATGCAGCTCAACCTTTTCAGGCCTGTAGACAATCAGATAGAGGGGTCTCCAGTGATTTCAGCCTAGAAAATGAAGTTGCTCACCGTCTCACAAGGCTTACATGTAAGATTCTTCCATCTATAAGCTTGTCATTGTTTATTCAAGCCATTGCAGTTCTCTCTATCTGCTCGAAGTTAACCAAAGCTCTAGATATTACGTAGTGCATAACACCATTATGTATTAGATGAAATGTACATTTTTGGGAAATCCCCAATTCCTAGACGTTTACGCTGTTCAAAGGTAGTGTGTATGATGACTACACTCCAATACCGCAATAAGAGTTCGTGTTTTAACAAATATGtaccctctcctgctctctgatGTCTCACTTATGTGCCTACCCTCAGGATGGATAGTTTGCTGGAGATGCACTGTTGAGGCCCTTTGCTCAAAGGAATTAAGTCAAGTTAGGGACGAAGAAAGAATAAACACAATGCACTGTATACATGTGAAGTAGCTTGCTTAGTCCTGGTTTttgttttaaaatgtgttttaaacAAGAACAGATGAAATTTCTGAATATATGGAGCACTTTGACAGGTCAGCTCATCATGCTCACAACTTGGTAATGGAAACTATAACCCAGACACATGCAGCTTGCACAACTTTCGCTCATAAGAAAATAAAATGCTTTGAAAATGTA

Function

NR:

description
dickkopf-related protein 3-like isoform X1

GO:      GO:0044699

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607323.2 False 1637 mRNA 0.47 7 66327731 66332554
XM_021607322.2 True 1757 mRNA 0.47 8 66327737 66332554

Neighbor

gene id symbol gene type direction distance location
LOC110526374 LOC100196685 coding upstream 229416 66085119 ~ 66098315 (+)
LOC110526373 LOC106587200 coding upstream 292350 65948419 ~ 66035381 (+)
LOC110526370 LOC106562103 coding upstream 484162 65833759 ~ 65843569 (+)
LOC110526368 LOC106587203 coding upstream 535051 65774787 ~ 65792680 (+)
LOC110526366 LOC106587204 coding upstream 556341 65768783 ~ 65771390 (+)
pkd1l2a LOC106587186 coding downstream 128169 66460723 ~ 66500000 (+)
LOC110526388 LOC106587185 coding downstream 174357 66506911 ~ 66565353 (+)
LOC110526389 LOC106587184 coding downstream 242936 66575490 ~ 66591573 (+)
LOC110526391 LOC106587183 coding downstream 260027 66592581 ~ 66596719 (+)
LOC110526390 LOC106587182 coding downstream 265224 66597778 ~ 66602137 (+)
G536192 NA non-coding upstream 43078 66283077 ~ 66284653 (+)
G536188 NA non-coding upstream 50979 66276551 ~ 66276752 (+)
G536174 NA non-coding upstream 66287 66256684 ~ 66261444 (+)
G535358 NA non-coding upstream 180876 66146585 ~ 66146855 (+)
G535194 NA non-coding upstream 397330 65897509 ~ 65930401 (+)
G536218 NA non-coding downstream 155 66332709 ~ 66334248 (+)
G536220 LOC106587191 non-coding downstream 7559 66340113 ~ 66340522 (+)
G536329 NA non-coding downstream 81862 66414416 ~ 66437171 (+)
G536348 NA non-coding downstream 114451 66447005 ~ 66449264 (+)
G536371 NA non-coding downstream 156011 66488565 ~ 66492463 (+)
G535150 LOC106587155 other upstream 478290 65847623 ~ 65849441 (+)
LOC110526356 LOC106587213 other upstream 1166401 65065380 ~ 65178884 (+)
G534653 NA other upstream 1209775 65113280 ~ 65169563 (+)
G534453 NA other upstream 1480627 64790322 ~ 64847104 (+)
LOC110526344 LOC106587225 other upstream 1551395 64769099 ~ 64781704 (+)
G536406 NA other downstream 270231 66602785 ~ 66604053 (+)
G536995 zfhx3 other downstream 680666 67013220 ~ 67018653 (+)
G537029 zfhx3 other downstream 771752 67104306 ~ 67104908 (+)
G537032 LOC106587324 other downstream 777122 67109676 ~ 67110628 (+)
G537606 NA other downstream 1422002 67754556 ~ 67756618 (+)

Expression


Co-expression Network