LOC110526387 (LOC106587187)


Basic Information

Item Value
gene id LOC110526387
gene name LOC106587187
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 66499996 ~ 66505055 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110526387
CAAGGTCACATGACCCTACGCGAAGGATTGTGGAGCACTGACCGTGGTTGTGGTTCTCTATCGCGAAAATATTTTCTATTGAATTTAATTCACACATAAACATGCCGGAGTTGGCTGTTGAAAAAGTGATTGTCCATCCCTTGGTGCTCCTGAGTGTGGTGGATCATTTTAACAGAATCGGTAAAGTTGGAAGTCAGAAGAGGGTTGTGGGTGTACTGCTCTGCTCATGGCATAAGAAGGTTCTTGATGTGTCCAACAGCTTTGCAGtGCCATTTGACGAGGATGACAAGGATGATTCTGTGTGGTTCCTGGACCATTACTATTTGGAGAACATGTACAACATGTTCAAGAAAGTCAATGCAAGAGAAAGAATAGTTGGTTGGTATCACACAGGACCCAAACTACACATAATGACATTGCCATCAATGAACTCGTGAAGCAATATTGTACCAATTCTGTTTTAGTCATCATTGACGTGAAACCGAAAGATCTGGGTCTACCAACGGAGGCCTACATATCTGTGGAGGAAGTGCATGATGATGGCACTCCCACATCCAAGACCTTTGAACATGTCACCAGTGAGATTGGTgctgaagaagcagaggaagtGGGCGTGGAGCATTTACTCCGAGACATCAAGGACACAACAGTTGGCACCCTGTCTCAACGCATCACCAACCAGGTGCATGGCCTAAAGGGCCTCAACTGCAAGTTAGTGGATATCAAAGGGTATTTGGACAAAGTTGCCGCAGGTAAGCTGCCCATCAGCCACCAGATCATCTACCAGCTGCAGGATGTCTTCAACCTGCTGCCTGACGTCAACCTTCAAGAGTTCATCAAGGCATTTTACCTCAAGACCAATGACCAGATGCTGGTGGTGTACCTGGCTTCACTCATCCGCTCCGTGGTTGCTCTTCACAACCTCATCAACAACAAGATCGCCAACCGAGATGCAGAGAAGAAGGAAGGCCAGGAAAAAGATGACAgcaagaaagagaagaaagaggacAAGGGAAAAGAGAAGGGAGACACTAAGAAAGATAAGAAGGACAAGAAATGAAGCAATGCTCATTTTGGACTACGGACTGGCTTTTTTTTTCTTCGTTCTCCCCACCTGTCAGACACTATATTTTTTTAATGGATTCAAAGAGTGAAGGGAATTGGCTATTTGGTTATCTACTCCACATAAGTCTTATTGTTTTTTATTCTTATGCAGCTCATTTGGTTAATGTTTCAGCCATTTTTATTAATTTCACAAACATTACTAGTACAACAACATTGGAATTATCTTTGTATCCTTCTCTCCTCATTGTTGTCTCCTAACATGTTACCATAGTAACCATACATATGTGTATTCCTGACAGAGTGAGGTAACAGAAGGAGCTGTTATTTCCTCTAACTTCTTTTTAAAGCTTTGCATTAGATCACA
>TU607649
TGGAGCACTGACCGTGGTTGTGGTTCTCTATCGCGAAAATATTTTCTATTGAATTTAATTCACACATAAACATGCCGGAGTTGGCTGTTGAAAAAGTGATTGTCCATCCCTTGGTGCTCCTGAGTGTGGTGGATCATTTTAACAGAATCGGTAAAGTTGGAAGTCAGAAGAGGGTTGTGGGTGTACTGCTCTGCTCATGGCATAAGAAGGTTCTTGATGTGTCCAACAGCTTTGCAGGTTTTAGTCATCATTGACGTGAAACCGAAAGATCTGGGTCTACCAACGGAGGCCTACATATCTGTGGAGGAAGTGCATGATGATGGCACTCCCACATCCAAGACCTTTGAACATGTCACCAGTGAGATTGGTgctgaagaagcagaggaagtGGGCGTGGAGCATTTACTCCGAGACATCAAGGACACAACAGTTGGCACCCTGTCTCAACGCATCACCAACCAGGTGCATGGCCTAAAGGGCCTCAACTGCAAGTTAGTGGATATCAAAGGGTATTTGGACAAAGTTGCCGCAGGTAAGCTGCCCATCAGCCACCAGATCATCTACCAGCTGCAGGATGTCTTCAACCTGCTGCCTGACGTCAACCTTCAAGAGTTCATCAAGGCATTTTACCTCAAGACCAATGACCAGATGCTGGTGGTGTACCTGGCTTCACTCATCCGCTCCGTGGTTGCTCTTCACAACCTCATCAACAACAAGATCGCCAACCGAGATGCAGAGAAGAAGGAAGGCCAGGAAAAAGATGACAgcaagaaagagaagaaagaggacAAGGGAAAAGAGAAGGGAGACACTAAGA

Function

NR:

description
26S proteasome non-ATPase regulatory subunit 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110526387 False 1429 mRNA 0.48 7 66499996 66505055
TU607649 True 817 TUCP 0.48 5 66500388 66505025

Neighbor

gene id symbol gene type direction distance location
LOC118964921 LOC106587186 coding downstream 11969 66485280 ~ 66488027 (-)
LOC110526385 LOC101448035 coding downstream 47344 66448244 ~ 66452652 (-)
bco1 bcmo1 coding downstream 61389 66406013 ~ 66438607 (-)
LOC110526384 LOC106587189 coding downstream 94087 66401753 ~ 66405909 (-)
LOC110526383 LOC106587190 coding downstream 101577 66360855 ~ 66398419 (-)
LOC110526397 LOC106562084 coding upstream 299303 66804358 ~ 66819558 (-)
LOC110526396 LOC106562084 coding upstream 322199 66827254 ~ 66872098 (-)
LOC110526398 LOC106562084 coding upstream 417902 66922957 ~ 66971031 (-)
LOC110526399 zfhx3 coding upstream 500240 67005295 ~ 67176656 (-)
LOC110526402 LOC106587327 coding upstream 1072686 67577741 ~ 67594801 (-)
G536632 NA non-coding downstream 35732 66413296 ~ 66464264 (-)
G536290 NA non-coding downstream 170687 66328602 ~ 66329309 (-)
G536288 NA non-coding downstream 172588 66327184 ~ 66327408 (-)
G536717 NA non-coding upstream 64952 66570007 ~ 66570347 (-)
G536721 NA non-coding upstream 68210 66573265 ~ 66573486 (-)
G536726 NA non-coding upstream 77562 66582617 ~ 66586669 (-)
G536735 NA non-coding upstream 96399 66601454 ~ 66602161 (-)
G536739 NA non-coding upstream 98158 66603213 ~ 66604041 (-)
LOC110526379 LOC106587193 other downstream 218377 66277162 ~ 66326558 (-)
G536183 NA other downstream 223707 66262486 ~ 66276289 (-)
LOC110526365 LOC106587205 other downstream 874024 65600097 ~ 65765382 (-)
G534603 NA other downstream 1614464 64855495 ~ 64895099 (-)
G534349 NA other downstream 1885200 64578798 ~ 64614796 (-)
G536630 LOC106562092 other upstream 44312 66549367 ~ 66549974 (-)
G538277 NA other upstream 1637196 68142251 ~ 68144907 (-)
G538460 LOC106587433 other upstream 2005260 68510315 ~ 68516681 (-)
LOC110526447 LOC106587408 other upstream 2302358 68807413 ~ 68816777 (-)
LOC110526455 LOC106587401 other upstream 2444465 68949510 ~ 68953699 (-)

Expression


Co-expression Network