LOC100136691 (LOC100136691)


Basic Information

Item Value
gene id LOC100136691
gene name LOC100136691
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 67898266 ~ 67900809 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604937.2
GACTGTGGAATTGTTCGTTGAGACTTGTTTACTTGGGCCTTGTGTCAGTGGAGATAGCGAGCAAACAACAGAACTAAAAGCGGAGTTTTGCCCATTATAGCTGGCTATCTAACTGCCTTGTTTTTAACAAAGCGTAAAGATGTCGTCATTGGAAGTTCGTGCTGCGTTAAGGAACGCAGACAACCCAGCACTAATGGGAAAAGCAAACGTAGCTGGAGCAAGAAGGGCTGTGCTTGGAGAGCTGTCCAACTTTCCCAATGCCAGCAAAGCGGTGCCGTCCAAGACTGTTGCTGCTAAGGCTTCAACCAAACAATCTATGAACCAAAAAGACCAGCCAGCAGCTGTTCGGACTAAACGTTCCCCAGTTCCTCAGCCTGAAGAGTCTGCTAACGTGTCCATGAAAGAAGAGGAATTGTGTCAGGCGTTCTCAGTAGCTCTACTTGCTGTAGAAGACATTGATGAAGGGGATTCAGACATGCCACAACTGTGCTCTGAATATATAAAGGATATCTATGGATATTTGCAGTGCCTTGAGACCCAGCAGTCTGTCCGGCCCAAGTACATGAATGGCTATGAGATCAATGGACGAATGCGCGCTCTcctgattgactggctgattcAGGTGCATTCCAGGTTCCAGCTACTGCAGGAGACTCTGTATTTGACTGTGGCCATCCTGGATCGCTTTCTTCAGGTGCAAACTATCGGCCGCAAGAATCTCCAGCTGGTTGGCGTGACTGCCATGTTGTTGGCATCCAAGTATGAAGAGATGTATTCCCCGGAGATTGGCGATTTCGTTTACATCACAGACAATGCGTTCACCAAGGCCCATATTCGGGAGATGGAACAGCTGATTCTGCAGAGTCTGAACTTCGAGCTTGGACGGCCTCTACCCCTACACTTCCTCAGGAGAGCCTCCAAGGCTGGCAATGCTGATGTTGAGAAGCACACACTAGCCAAATACCTCATGGAACTGACCCTCCTTGACTATGACATGGTGCACTACCATCCTTCTGAGATTGCTGCTGCAGCCTTGTGCCTCTCCCAGCTGCTGCTTGATGAGCTCAACTGGACTCCAACGCAGGAGCATTACTCTACCTATAATGAGAACCACCTCAAGCCAATCATGCAGCACATTGCCAAAAATGTTGTCTCTGTCAATGAAGGGCGAACAAAGCTTCAGGCTGTCAAGAACAAGTATGCAAGCAGCAGGCTAATGAGGATCAGCCTCATCCCTCAGCTGAAGTCTGCTGTTGTAAATGACATGGCTGCTGCTCTGCTCCCAGAACATAAACCCTGATGTGATTAGACTGATTCTTAATCTGCTGCACTTTATTTTTTAACTTGTTTTTTGTCTTTAAGAATCTATCGTGAGATGGCCTTTTTAGACTGCTGCTTTTAAGTACATGTAAATATTTAAATTTGTACAAATAAACGTTTTGAACCATCTTAAATATGGTCTAGATGTA
>NM_001124659.2
ACTTGGGCCTTGTGTCAGTGGAGATAGCGAGCAAACAACAGAACTAAAAGCGGAGTTTTGCCCATTATAGCTGGCTATCTAACTGCCTTGTTTTTAACAAAGCGTAAAGATGTCGTCATTGGAAGTTCGTGCTGCGTTAAGGAACGCAGACAACCCAGCACTAATGGGAAAAGCAAACGTAGCTGGAGCAAGAAGGGCTGTGCTTGGAGAGCTGTCCAACTTTCCCAATGCCAGCAAAGCGGTGCCGTCCAAGAAGACTGTTGCTGCTAAGGCTTCAACCAAACAATCTATGAACCAAAAAGACCAGCCAGCAGCTGTTCGGACTAAACGTTCCCCAGTTCCTCAGCCTGAAGAGTCTGCTAACGTGTCCATGAAAGAAGAGGAATTGTGTCAGGCGTTCTCAGTAGCTCTACTTGCTGTAGAAGACATTGATGAAGGGGATTCAGACATGCCACAACTGTGCTCTGAATATATAAAGGATATCTATGGATATTTGCAGTGCCTTGAGACCCAGCAGTCTGTCCGGCCCAAGTACATGAATGGCTATGAGATCAATGGACGAATGCGCGCTCTcctgattgactggctgattcAGGTGCATTCCAGGTTCCAGCTACTGCAGGAGACTCTGTATTTGACTGTGGCCATCCTGGATCGCTTTCTTCAGGTGCAAACTATCGGCCGCAAGAATCTCCAGCTGGTTGGCGTGACTGCCATGTTGTTGGCATCCAAGTATGAAGAGATGTATTCCCCGGAGATTGGCGATTTCGTTTACATCACAGACAATGCGTTCACCAAGGCCCATATTCGGGAGATGGAACAGCTGATTCTGCAGAGTCTGAACTTCGAGCTTGGACGGCCTCTACCCCTACACTTCCTCAGGAGAGCCTCCAAGGCTGGCAATGCTGATGTTGAGAAGCACACACTAGCCAAATACCTCATGGAACTGACCCTCCTTGACTATGACATGGTGCACTACCATCCTTCTGAGATTGCTGCTGCAGCCTTGTGCCTCTCCCAGCTGCTGCTTGATGAGCTCAACTGGACTCCAACGCAGGAGCATTACTCTACCTATAATGAGAACCACCTCAAGCCAATCATGCAGCACATTGCCAAAAATGTTGTCTCTGTCAATGAAGGGCGAACAAAGCTTCAGGCTGTCAAGAACAAGTATGCAAGCAGCAGGCTAATGAGGATCAGCCTCATCCCTCAGCTGAAGTCTGCTGTTGTAAATGACATGGCTGCTGCTCTGCTCCCAGAACATAAACCCTGATGTGATTAGACTGATTCTTAATCTGCTGCACTTTATTTTTTAACTTGTTTTTTGTCTTTAAGAATCTATCGTGAGATGGCCTTTTTAGACTGCTGCTTTTAAGTACATGTAAATATTTAAATTTGTACAAATAAACGTTTTGAACCATCTTAA

Function

NR:

description
cyclin B2

GO:

id name namespace
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity biological_process
GO:0005634 nucleus cellular_component
GO:0019901 protein kinase binding molecular_function

KEGG:

id description
K21770 CCNB2; G2/mitotic-specific cyclin-B2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604937.2 False 1469 mRNA 0.46 8 67898266 67900809
NM_001124659.2 True 1426 mRNA 0.47 8 67898282 67900779

Neighbor

gene id symbol gene type direction distance location
LOC118965086 LOC106587318 coding downstream 66454 67831292 ~ 67831812 (-)
LOC118964923 LOC106587318 coding downstream 67357 67822238 ~ 67830909 (-)
LOC118964922 LOC106587318 coding downstream 76347 67803950 ~ 67821919 (-)
LOC110526409 LOC106587318 coding downstream 94631 67794919 ~ 67803635 (-)
LOC110526408 LOC106562206 coding downstream 103680 67770343 ~ 67794586 (-)
LOC110526411 LOC106587339 coding upstream 2338 67903147 ~ 67953636 (-)
mindy2 LOC106587341 coding upstream 72843 67973652 ~ 68002653 (-)
LOC110526950 LOC106587343 coding upstream 216004 68116813 ~ 68131519 (-)
LOC110526415 LOC106587344 coding upstream 237152 68137961 ~ 68160295 (-)
LOC110526951 LOC106587321 coding upstream 334045 68234854 ~ 68257368 (-)
G538144 myo1e non-coding downstream 16081 67880561 ~ 67882185 (-)
G538119 NA non-coding downstream 50265 67837647 ~ 67848001 (-)
G538103 NA non-coding downstream 76980 67813383 ~ 67821286 (-)
LOC110526407 atxn1l non-coding downstream 128569 67757121 ~ 67769916 (-)
G538110 NA non-coding downstream 141675 67751498 ~ 67756591 (-)
G538190 NA non-coding upstream 106028 68006837 ~ 68010914 (-)
G538199 NA non-coding upstream 112377 68013186 ~ 68014567 (-)
G538287 NA non-coding upstream 264728 68165537 ~ 68169289 (-)
G538297 NA non-coding upstream 291607 68192416 ~ 68192755 (-)
G538299 NA non-coding upstream 292859 68193668 ~ 68193885 (-)
G536630 LOC106562092 other downstream 1348292 66549367 ~ 66549974 (-)
LOC110526387 LOC106587187 other downstream 1393241 66499996 ~ 66505055 (-)
LOC110526379 LOC106587193 other downstream 1616647 66277162 ~ 66326558 (-)
G536183 NA other downstream 1621977 66262486 ~ 66276289 (-)
LOC110526365 LOC106587205 other downstream 2272294 65600097 ~ 65765382 (-)
G538277 NA other upstream 241442 68142251 ~ 68144907 (-)
G538460 LOC106587433 other upstream 609506 68510315 ~ 68516681 (-)
LOC110526447 LOC106587408 other upstream 906604 68807413 ~ 68816777 (-)
LOC110526455 LOC106587401 other upstream 1048711 68949510 ~ 68953699 (-)
G539306 NA other upstream 1101934 69002743 ~ 69005665 (-)

Expression


Co-expression Network