LOC110526952


Basic Information

Item Value
gene id LOC110526952
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 68698250 ~ 68707033 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036980831.1
ATACTAAAATTAATTGTAAACGATAGCGAGAaaggaaagaagagaaagaaaagtGAAGAGCGAGCAGAACTTTATGCACTACTCGAGGACGAAGATGTGAAGAGGGGAGTGAAGGAAGCATGGTCGCAGCGAGCGAGggcAGGACTATTTGGGTGGTTTCGATCCTGGCTGGGGGAAGTGTTGGGGGTAGAACTGAAGCCCACAGTGGACATTTCCTGTGCCAAGTACCAATACACCGATGTTCTGTTGTGTCATGATGATGAGTTGGAGGGGAGGCGTGTTGCCTTCATCCTCTACTTTGTCCCTCCATGGGAGAGCAGCGATGGAGGAACCCTGGATCTCTTCAGCGCAGATGaTCACTTCCAGCCCCATAGTGTGGTGAAGTCTCTGGTGCCCAGCTGGAACACTCTGGTTCTCTTCGAGGTTTCACCCGTCTCCTTCCACCAGgtTTCACGGGCCGTCTTTGGAGCGACCCCCTCGTCACACAGATCCCCCCTTGCCAAGGAGCCCCCACCTTCTCAGAGATTGCTGCTAGAGTGGCTGACTCCACTGCATCTGGATGTTGACTACCAGTCACAGGTTCAGCAAGAGTTAGAGGACAGCTGAGATCCAGCTCAAGAATTTCCTCAAAGAGGAGAAGTTTAAGGAGGTGAGTGAAGCACTGCGATCGACTGACGTCCAGTGGACCAAGCAAGGTCCTCCCAACAGGAGTTGAGCCTGTCAAGTAATttgtttgtgtgagtgagagagagatcccGAACGTGTTATGATGGCTGTAAACGTATATGATTTGTGTAAATATTTTTGTGTATGTCCGTTGTGCAGATGTTATGAAGTGACTTCGTTAGAGTCCTTCCCCCAGTGTGTGAGTGCATGCTGGGAGCTGTTGTTCTCGGAGGCGTTCTTACTGCTTCTGTCCAACTTCACTGGCCTGATACTGCACTATCTCAGCCCTAGTGACGAAGacaaggaggaagagaaggaccAAGAAGATGAACAAGAGAGAGAAGCCACAGGGTCATCTGGGTACAAACCATCAGCTAATAAGAATACCAAAGAGCCGAGCACTCCGGTGTGTGTTGGAGAACTGCGTCGCTGGGCTCACGGGGACTACACACTACTGCACGATGGAGACGCATCGAGAGCGGAGTACGCCCTTGACCTACTGCTGCCCCTGAGCTGTCCTGACTGGCAGACCGAGTTTGGGGGTTCACCTCTTATATTGCTaatgaagaggatgaggagCTCCTGATGGTGTATCCAGAGGTCAACTCCCTGGCTCTTGTCTACAGGGACAAAGAGACTCTCAAATTTGTCAAACATATAATTCACAGAAGCTCCACCCTACCTATTGGTGATTCTTGTTGGAGAGCAGTTTATGACTTCTCCTTTGTGTATTATGATTgagtttttgtgtgtatgtgttgaggtGTATGTGTTTGTAATATAACATCACTGTGAGGGGTGGTCGGTCTACTCTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036980831.1 True 1483 mRNA 0.49 10 68698250 68707033

Neighbor

gene id symbol gene type direction distance location
tradd LOC100136668 coding downstream 2515 68683171 ~ 68695735 (-)
LOC110526435 LOC106562227 coding downstream 20548 68665174 ~ 68677702 (-)
pigb pigb coding downstream 70866 68623434 ~ 68627384 (-)
LOC110526433 NA coding downstream 89075 68596131 ~ 68609175 (-)
LOC110526422 NA coding downstream 258726 68432656 ~ 68439524 (-)
LOC110526442 LOC106587420 coding upstream 337 68707370 ~ 68713633 (-)
LOC110526441 LOC106562231 coding upstream 7020 68714053 ~ 68720434 (-)
LOC110526437 LOC106587415 coding upstream 17018 68724051 ~ 68729230 (-)
LOC110526438 LOC106562233 coding upstream 22911 68729944 ~ 68743853 (-)
LOC110526439 LOC106587418 coding upstream 37631 68744664 ~ 68759926 (-)
G538701 NA non-coding downstream 1272 68696208 ~ 68696978 (-)
G538698 NA non-coding downstream 16036 68681851 ~ 68682214 (-)
G538678 LOC106587425 non-coding downstream 53659 68641673 ~ 68644591 (-)
G538674 NA non-coding downstream 61585 68629984 ~ 68636665 (-)
G538665 NA non-coding downstream 86543 68611489 ~ 68611707 (-)
G538719 NA non-coding upstream 4393 68711426 ~ 68794928 (-)
G538798 NA non-coding upstream 151334 68858367 ~ 68858791 (-)
G538800 NA non-coding upstream 152199 68859232 ~ 68859489 (-)
G538848 NA non-coding upstream 187955 68894988 ~ 68898434 (-)
G539287 NA non-coding upstream 203561 68910594 ~ 68910827 (-)
G538460 LOC106587433 other downstream 181569 68510315 ~ 68516681 (-)
G538277 NA other downstream 553343 68142251 ~ 68144907 (-)
G536630 LOC106562092 other downstream 2148276 66549367 ~ 66549974 (-)
LOC110526387 LOC106587187 other downstream 2193225 66499996 ~ 66505055 (-)
LOC110526379 LOC106587193 other downstream 2416631 66277162 ~ 66326558 (-)
LOC110526447 LOC106587408 other upstream 100380 68807413 ~ 68816777 (-)
LOC110526455 LOC106587401 other upstream 242487 68949510 ~ 68953699 (-)
G539306 NA other upstream 295710 69002743 ~ 69005665 (-)
LOC110526462 NA other upstream 566085 69272988 ~ 69289496 (-)
G539674 LOC106587381 other upstream 908721 69615754 ~ 69616671 (-)

Expression


Co-expression Network