LOC110526444 (LOC106587414)


Basic Information

Item Value
gene id LOC110526444
gene name LOC106587414
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 68775474 ~ 68780317 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607435.2
CTTCCACTACCACGACAACAGCCACTACTTctactcctaccaccaccaccaaagaAACTACCCCTAAAACtaaaactactgctgctactctttcTTCAACCAGTGAAACAACTCCTGTACCCTTGACaactccttcctctccccccatTATCTCACCCAGCTCTACTACACCTTCTCCAATCCCTTCCACCAAAACCTTCACAACTCCTGTCCTTACCACTACCACAACTCTCACTACTTCAGCTACCTCTCCTGATCAGGAAGTTTGTCTTGCTGTGGAGATTAATCTGACAGCAACCTTGGTTGCAGACAGTATCTGCAAACAAGATCTCATTCAACATGGCAGAGATTTTGAACCCTGAACTCGAGGTGAACCTGCCCCACAACCTTCTCTCAGGGCTAAAGCGGAGACACACCCCTGACATGGTTAAGTTCATCTTCTCTGTGCTTAAAACCTCACCACCAAATTGGGTGAGTTACCATGCACTCCCAAGTTGCACATCACATGGCTAAAACATCTTAAACGTTTGTCAGgaataatgtgtgtgtctgtgtgtagaccGTAGAGGGACAACTTGGTAAGATTCTCTTTGGTATTGAAGTTGAGAACATAACCATCTCTCACCTGTCAACACCATTCAACATGACCTTCAAACACAAATCTGAACTACAGGAAAAAGAGAATACAACGTGTGTCTACCACAACCAGAGTCGAGGTGAATGGGTCACTGATGGCTGCCACACCCTGAGGCTCACTAACCAGACCATCTGTAGCTGTGACCACTTCTCCTTTTTTGCCCTCATGATCCCTGATATGAAGCTGAGTGAGGTCCATGCCAGGATGCTGAGTGTGCTCACCTGTGTGGGCGGAGCCATCTCTGTGTTCTTCTGCACCATCACCTTACTGACACACTGTCTTCAGCATTCACGGAAATCTACTGACCATGCCATGCTGGTTCATCTCCAGTTGGTGGCATCTCTGTTGTTACTCAACCTGCTGCTCTTGACCAGTGTGGGTTTGGCATTTGTGGGCCCTGCATCTATGGCCCCTGGCCTGTGTCCTGCCGTGGCCGCCCTGCTGCACTACTCACTGCTCTGCTGCTTCACCTGGATGGGCCTGGAGGCTCTGCATCTGTACAGGCTGCTGGTCCTAGTCTACAACACCTACATGAGACACTACCTGCTGAAGCTGAGCCTGCTGGGCTGGGGTGTTCCTGCTTTGGTTGTATCCATAGTCGCCGCTGTCAGTACAGATTTCTATGGGCTGAATAACCGAATGTGCTGGATCAAAGACTCTGGTGTGCAGTACGGCTCTGTTGTGGCTTACCTGATAGTGGTCCTGCTCTTCAATAGCACCATCTTCGCCATCGTCATCACAACGATGCTCAAGCTGCGCTCTGTCACGTCGCCGCAGGGGAAGAGGCAGAGCCGCAACATCACCTGCAGCGTTCTTGGGTTGACCTGCATCCTGGGCCTCACCTGGGGGGTGGGCTTCTTCTCCATGGGCTACACCAACTATGTCATCCTCTACATCTTTACCATCCTCAACTCACTGCAGGGGTTCTTCCTGTTCCTATGGCTCTGCGTTAAGAGACTGCGGGGGGCAGAGCAGAGTTCCATGACAACTGGACAGAGCTCAAGCACCCACATTCTCTCCGTGGGAAGCGAGGTCTGGCCCTCTTCTGGAAGAACAAGGCAGTCAGTGCAAGAGGGAGCAATTGCTGACAATACAGCTAAGTTCTGACCAAAAGCTGACTTTAGTTTGTGATGCTTTAGCTCACTGAGATGAAAGGAAATCTACAAATGGAAATGAAGTACCGTGAAGGAATTGTTTTGCTTCGGTcccatacagtacatcacattcttaaataaataaatgttaaagCAGATAACCCTTAAGAAAGAACATGTTGTACTCCTATCGTTTAATTTCTTCCTGTTAAAATGAGATTTGCTGTTTTATATGCCATGATTTATATGCCACCTTTCACCTAAAGCcttctattattattattctggGATGGAAAGGGGGGTTGGAACTGTTCTCAGAGATGAAACGAAAGTGAATTGTAATGATTGTACACTAATTCTGTATtaaatatacatatacagtaccagtcaaaagttgacactgtcatgacgttggcctgggggatgggtttatgacagtcataaatacct

Function

NR:

description
adhesion G protein-coupled receptor G3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607435.2 True 2181 mRNA 0.48 9 68775474 68780317

Neighbor

gene id symbol gene type direction distance location
LOC110526436 LOC107688027 coding upstream 93799 68679317 ~ 68681675 (+)
LOC110526434 cog4 coding upstream 111082 68644828 ~ 68664392 (+)
LOC110526432 LOC106587425 coding upstream 130883 68640790 ~ 68644591 (+)
LOC110526430 LOC106587426 coding upstream 134861 68627574 ~ 68640613 (+)
LOC110526427 ccpg1 coding upstream 151586 68605596 ~ 68623888 (+)
LOC110526448 tha11 coding downstream 36622 68816939 ~ 68818769 (+)
LOC110526954 cmtr2 coding downstream 68354 68848671 ~ 68856233 (+)
LOC110526451 LOC106587405 coding downstream 101273 68881590 ~ 68899511 (+)
LOC110526452 LOC106587404 coding downstream 142521 68922838 ~ 68936761 (+)
LOC110526454 LOC106587403 coding downstream 158325 68938642 ~ 68946874 (+)
G538565 LOC106587420 non-coding upstream 65846 68707409 ~ 68709628 (+)
G538564 NA non-coding upstream 68174 68706919 ~ 68707300 (+)
G538563 NA non-coding upstream 70051 68705188 ~ 68705423 (+)
G538562 NA non-coding upstream 70371 68704765 ~ 68705103 (+)
G538559 NA non-coding upstream 72508 68702625 ~ 68702966 (+)
G538785 NA non-coding downstream 65241 68845558 ~ 68845766 (+)
G538788 NA non-coding downstream 67723 68848040 ~ 68848328 (+)
G538799 NA non-coding downstream 78974 68859291 ~ 68859533 (+)
G538851 NA non-coding downstream 120478 68900795 ~ 68901024 (+)
G538852 NA non-coding downstream 122064 68902381 ~ 68903425 (+)
G538561 NA other upstream 70778 68704398 ~ 68704696 (+)
G537617 atxn1l other upstream 1007861 67766756 ~ 67767613 (+)
G537606 NA other upstream 1018856 67754556 ~ 67756618 (+)
G537032 LOC106587324 other upstream 1664846 67109676 ~ 67110628 (+)
G538607 NA other downstream 30802 68811119 ~ 68811890 (+)
G538859 NA other downstream 125728 68906045 ~ 68906847 (+)
G538877 LOC106582599 other downstream 215766 68996083 ~ 69002828 (+)
LOC110526955 LOC106587395 other downstream 231289 69007055 ~ 69018414 (+)
G539068 NA other downstream 581324 69361641 ~ 69367642 (+)

Expression


Co-expression Network