LOC118965123


Basic Information

Item Value
gene id LOC118965123
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 68955265 ~ 68955385 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052454.1
GCACTATTATTACGCccctgggtctgtgtgtgacctCAGGGGTTACGCTGTAGTGctacagaatctctctctctcccaggctgtGCTTGTTCTGTAGCCTGCGTAGAACTGAGACACAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052454.1 True 121 mRNA 0.53 1 68955265 68955385

Neighbor

gene id symbol gene type direction distance location
LOC110526454 LOC106587403 coding upstream 8391 68938642 ~ 68946874 (+)
LOC110526452 LOC106587404 coding upstream 18504 68922838 ~ 68936761 (+)
LOC110526451 LOC106587405 coding upstream 55754 68881590 ~ 68899511 (+)
LOC110526954 cmtr2 coding upstream 99032 68848671 ~ 68856233 (+)
LOC110526448 tha11 coding upstream 136496 68816939 ~ 68818769 (+)
LOC110526457 LOC106587399 coding downstream 9670 68965055 ~ 68977010 (+)
LOC110526456 LOC106587398 coding downstream 23512 68978897 ~ 68988139 (+)
LOC110526955 LOC106587395 coding downstream 51670 69007055 ~ 69018414 (+)
LOC110526458 LOC106587394 coding downstream 75497 69030882 ~ 69133616 (+)
LOC110526459 LOC106562249 coding downstream 192945 69148330 ~ 69189966 (+)
G538869 NA non-coding upstream 38965 68916056 ~ 68916300 (+)
G538867 NA non-coding upstream 41229 68913773 ~ 68914036 (+)
G538864 NA non-coding upstream 43728 68911221 ~ 68911537 (+)
G538863 NA non-coding upstream 44433 68910594 ~ 68910832 (+)
G538858 NA non-coding upstream 49355 68905618 ~ 68905910 (+)
G538906 NA non-coding downstream 5830 68961215 ~ 68961454 (+)
G538907 NA non-coding downstream 6280 68961665 ~ 68961869 (+)
G538878 NA non-coding downstream 35453 68990838 ~ 68992839 (+)
G538925 NA non-coding downstream 63464 69018849 ~ 69019053 (+)
G538931 NA non-coding downstream 87236 69042621 ~ 69044027 (+)
G538859 NA other upstream 48418 68906045 ~ 68906847 (+)
G538607 NA other upstream 143375 68811119 ~ 68811890 (+)
G538561 NA other upstream 250569 68704398 ~ 68704696 (+)
LOC110526436 LOC107688027 other upstream 273613 68679317 ~ 68681675 (+)
G537617 atxn1l other upstream 1187652 67766756 ~ 67767613 (+)
G538877 LOC106582599 other downstream 40698 68996083 ~ 69002828 (+)
G539068 NA other downstream 406256 69361641 ~ 69367642 (+)
G539959 NA other downstream 1060957 70015270 ~ 70019477 (+)
LOC110525047 psf2 other downstream 1080809 70036194 ~ 70039507 (+)

Expression


Co-expression Network