LOC110526456 (LOC106587398)


Basic Information

Item Value
gene id LOC110526456
gene name LOC106587398
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 68978897 ~ 68988139 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036980841.1
TTCAGAGCAGTCTAATGTGTGTGGGTGGCGTCTAAGAGTCAGAAAATATCCCTGGGTGGCGTCTAAGAGTCAATATCCCTGGGTGGTGTGGTTGGTATCTTTAAATGGTGAAGAACACATTTCTTGCAGCCCAGTCACCATGATAGGTTCGGTGGTGTTGTTGCTATTTTTCCTCCTTCTGGTCTTCTTCATCAGGGTCCGCAGACCTAAAAACTTCCCCCCAGGACCCCGTCCCCTGCCCATCCTCGGCAATCTGCTACAGCTGGACCATGTCAACCCCCTCAAAGACCTGGAAAGGCTGAAGAGGCGCTATGGTAACGTGTTCAGTCTGTACATCGGATCACAGCCTGTCGTGTTTCTGAATGGCCTTGAGGCAGTTCGTGAGGCACTGGTAACACGCACAGCGGAATTTTCAGGACGACCAAAACATCTCATGATCAGCGACATCTCAGAAGGCAAAGGGGTCATCATGGCAGATTTTGGCTCCAGCTGGAGGGACCACCGACGCTTTGCTCTGACCACGCTGAGAAACTTTGGTCTGGGCAAACGCTCCATGGAAGAGCGCATCCTTGAGGAGGTCTCCCACATCTGCTCTGCGCTGGAGCGCAATGCTGGCAGTTCGATGGACCCTCAGCACCTGTTCCATCTAGCAGCATCTAACATCATCTGCTCACTGATTTACGGGGAAAGGTTTGAATACGACAACCCAGTCTTCCTCGCCCTCATCAGTAGGATACAGGATTTAACCAAAATTGCTATCGGACCTTGGGCCATGCTCTATGATATCATACCTGCCCTGAGGTCCCTACCCTTGCCCTTCAAGAAAGCCTTCCACATCTATGGTGAAATCAAAGAACATGCACAGAAGGCTGTGACCAGCCACAAAAGTTCAAGGGTCTCAGGAGAGCCCAGGGACCTCATTGACTGCTACCTTGACCAGATTGACATGACTGGTGATGGAGGCTCCACATTTAATGACGCTCAGATGGTGTTTCTACTAATTGATCTTTTCGTTGCTGGGACAGACACCACTTCCAACACCCTCCGCTGTGCCATGCTACACCTGATGACCAACCAACACATACAGGaacgCTGTCACCGGGAAATTGAGAACGTTCTTGAGGGACGTTCATACGCCTTGTTTGAGGACCGACACGCCATGCCGTATGTTCAAGCGATGATCCACGAGTCACAGCGGATGGCTGACACTGTTCCTCTTAGCGTGTTCCATATGACCTCCTGCAACACGCAAGTACAAGGCTTCCAGCTGCCCCAGGGCACAATGGTGATTCCTAACTTGTCCTCTGTGCTCCATGAAGAGGGCCAGTGGAAGTTCCCGCAGGAGTTCAACCCTGACAACTTCCTCAATGAGGACGGTGAATTTGTGAAACCAGAGGCCTTTCTGCCATTCTCagcagGCTCTCGTGTATGCCTGGGAGAAGGGTTAGCGCGCATGGAGCTCTTTCTGATACTGGTGACCTTGCTTCGACGTTTCCAATTTGTCTGGCCTGAACAAGAAGGTGCGCCCGACTTCCGCAAGGTTTTTGGCCTTGCACAGGCGCAAAAACCCTACCGTCTAGGAGTGCGCCTGAGGAGCAGCCAGTGATGGTAAACTACCGTCAGTTTTCACTGAGAAGCAATATCACTAAAGCAGCACATTAAACAATGCTGTACCCTC

Function

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0004497 monooxygenase activity molecular_function
GO:0005506 iron ion binding molecular_function
GO:0020037 heme binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036980841.1 True 1678 mRNA 0.51 9 68978897 68988139

Neighbor

gene id symbol gene type direction distance location
LOC110526457 LOC106587399 coding upstream 1887 68965055 ~ 68977010 (+)
LOC118965123 NA coding upstream 23512 68955265 ~ 68955385 (+)
LOC110526454 LOC106587403 coding upstream 32023 68938642 ~ 68946874 (+)
LOC110526452 LOC106587404 coding upstream 42136 68922838 ~ 68936761 (+)
LOC110526451 LOC106587405 coding upstream 79386 68881590 ~ 68899511 (+)
LOC110526955 LOC106587395 coding downstream 18916 69007055 ~ 69018414 (+)
LOC110526458 LOC106587394 coding downstream 42743 69030882 ~ 69133616 (+)
LOC110526459 LOC106562249 coding downstream 160191 69148330 ~ 69189966 (+)
rhcg rhcg coding downstream 234026 69222165 ~ 69228485 (+)
LOC118964925 NA coding downstream 292046 69280185 ~ 69293194 (+)
G538907 NA non-coding upstream 17028 68961665 ~ 68961869 (+)
G538906 NA non-coding upstream 17443 68961215 ~ 68961454 (+)
G538869 NA non-coding upstream 62597 68916056 ~ 68916300 (+)
G538867 NA non-coding upstream 64861 68913773 ~ 68914036 (+)
G538864 NA non-coding upstream 67360 68911221 ~ 68911537 (+)
G538878 NA non-coding downstream 2699 68990838 ~ 68992839 (+)
G538925 NA non-coding downstream 30710 69018849 ~ 69019053 (+)
G538931 NA non-coding downstream 54482 69042621 ~ 69044027 (+)
G538891 NA non-coding downstream 55931 69044070 ~ 69144935 (+)
G538977 NA non-coding downstream 227428 69215567 ~ 69216547 (+)
G538859 NA other upstream 72050 68906045 ~ 68906847 (+)
G538607 NA other upstream 167007 68811119 ~ 68811890 (+)
G538561 NA other upstream 274201 68704398 ~ 68704696 (+)
LOC110526436 LOC107688027 other upstream 297245 68679317 ~ 68681675 (+)
G537617 atxn1l other upstream 1211284 67766756 ~ 67767613 (+)
G538877 LOC106582599 other downstream 7944 68996083 ~ 69002828 (+)
G539068 NA other downstream 373502 69361641 ~ 69367642 (+)
G539959 NA other downstream 1028203 70015270 ~ 70019477 (+)
LOC110525047 psf2 other downstream 1048055 70036194 ~ 70039507 (+)

Expression


Co-expression Network