rhcg (rhcg)


Basic Information

Item Value
gene id rhcg
gene name rhcg
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 69222165 ~ 69228485 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124523.1
AGCATCACTGTCTCAGTACTTACTCAGCCTCCACCATGGGGAATTTCATCCAGGGATGCAAAGACTACTTCTCTCAGCAAAAGAACACCAACATCCGTCTTACACTGCCGGTAGTCTGCTTCGTCTGGCAGATTGCCATGATCATCCTCTTCGGAGTCTTCATCCGCTACGACGAGGAGTCGGACACACACTGGGTAGAGACCAAGGCCCATGACAACATCACCAGCGACATAGAGAATGACTTCTACTTCAGATACCCCAGCTTCCAGGATGTCCATGTGATGATCTTTGTGGGTTTCGGGTTCCTCATGACTTTCTTGAAGAGGTACAGCTTCGGCGCAGTCGGCTTCAACTTCCTCATTGCTTCCTTCGGCCTGCAGTGGGCTCTGCTCATGCAAGGCTGGTTCCACTCTCTCGATCCCCAGACAGGAAAGATCTTCATCGGTGTTGAAAGTCTGATCAATGCTGACTTCTGTGTGGCGGGCTGTCTCATAGCCTACGGGGCAGTGCTGGGCAAAGTCAGCCCGGTCCAGCTGTTGGTTATGACCCTGTTTGGTGTCACTCTGTTCGCTGTGGAAGAGTACATCATTCTGAACTTACTTCATGCTAGGGATGCCGGTGGCTCCATGGTTATTCACACCTTTGGAGGTTATTATGGTCTGACCATCTCCTGGGTCCTTTACCGACCTAATTTACACCAGAGCAAGCGTATGCAGGGCTCTGTGTACCACTCCGATATCTTCGCCATGATCGGCACACTGTTCCTGTGGATGTTCTGGCCCAGTTTCAACTCGGCCATTACTGACCATGGAGACGGTCAGCACAGGGCAGTCATCAACACCTACCTGTGCCTGGCCTCCACTGTCCTCACCACAGTGGCCATCTCCAGCTTCTCCCAGAAGACTGGCAAGCTCGACATGGTGCATATCCAGAATTCCACCCTGGCGGGGGGTGTTGCCTTGGGGACAGCGGCTGAGTTTATGATCTCTCCCTACGGCGCTCTGATCGTGGGCTTCTTATGCGGCATCATCTCTACCATGGGCTACATCTTCATTTCTCCCTTCTTGGAGAAGACACTGAAGATTCAGGACACGTGTGGAATACACAACCTGCACGCCATGCCTGGGGTGATTGGCGGTATAGTTGGAGCCATCACTGCTGCAGCTGCCAGCGAGTCAGTCTACGGAAAGCAGGGGTTGATCAACACGTTTGACTTCACTGGAGACTTTAAGGACAGAACCGTGTTAACTCAGGGTGGATACCAGGCCGCTGGAATGTGTGTGTCCATCGTCTTTGGTGTTGCAGGCGGAGCTATAGTCGGTTCCATCCTGAAGTTACCCATCTGGGGAGATCCTGCTGATGAGAACTGTTTTGATGATGAGGTGTACTGGGAGCTccctgatgaagaggaggagcatCAGGAGAGCATCCCTCCCATTCTGGAGTACAACAACCACATGATCCACAAGCGGCAAGACCTATCTGAGTCCAACTTCTCTGTGGAACACTGTGAAAGCTAAATACAGAGGTGTGAGGACACCACCACCCAAACATGTCCTGCTGGACCATGGAATTACCACGGAAATCCAACAGACAACCGCACTCCCCCTAAATGAAGGCACCTATACAAGGCACATTAAAACATGCTTTCTTGCATCTTATGTTAAGGTCATTACCTAAATCTGAAGCCATTAGATACTGTACGTGCCTTCACCCCTCCCCCCACCAGCCACCACCCACTCCATTAGATCACATACACTTCCTATATGGATATCCACTGGCACGGAACACTGTGTCCTGAATTCTGGTAGAATGCTGATCTATTGCAAGGACCTCTAAGATCTGCACTTAATCCACATGATGTGTGTCTAACTATAACCTACCACACAAAATGGCCAATAGAGCTTTTCCTGAGCATTGGTATactgtgtaatatatatatatatatatataaaacaatcacACACTGTGAAATCTTTGATCAAAACCACTGAATTGAATGAGGATGAGGAAAGGATTTTTCAGGAAATTACTTTGACCAATCCTCATTCTGTGGCCTTGTGTGTTGTACATTTTCTTCCCATTTTCTTTTCAGAGAAAATTGTATTTTAATATAGCTGGTGCATATGTAAAGAGGACAGTAGTTTACTTTTAGTTCAAAGTGAATATTTTGTCTCTAGTGCTCTGGGGGAAAAAATGGTTTTGCTCTATTTTCACAATGCAGGAGTACCCTTTGAGTCCCCAATATGATCATTTTCTTTGTTTGGGATAAAGATTTAAAGTATTTAACCAAAGAGTTAGTGTTGAGGTGTAGAAGTACATTTAAACTTTACTTGAACGTTTTTGGTGACATGATGTATTTAAACAGCTTTTAAAGCTATGTACATGCCAACACATTTTCATCGCTATCGCTAATGATTCAATGTATCCCCTGCCTTCTGAGATGCCCTCTATGTCTTCCACCTCTTAATTACGTTTTTACTGTACTGTTAAAATCATGTTTATTTAAATGTTGCTACTCATATAACTTAATAAATAAAATGTGAGGTTAGA

Function

symbol description
rhcg Enables ammonium transmembrane transporter activity; ankyrin binding activity; and identical protein binding activity. Involved in cellular ion homeostasis and transepithelial ammonium transport. Located in apical plasma membrane and basolateral plasma membrane. Is integral component of plasma membrane.

NR:

description
ammonium transporter Rh type C

GO:

id name namespace
GO:0072488 ammonium transmembrane transport biological_process
GO:0015695 organic cation transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016324 apical plasma membrane cellular_component
GO:0016327 apicolateral plasma membrane cellular_component
GO:0008519 ammonium transmembrane transporter activity molecular_function

KEGG:

id description
K06580 SLC42A, RHAG, RHBG, RHCG, CD241; ammonium transporter Rh

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124523.1 True 2553 mRNA 0.46 11 69222165 69228485

Neighbor

gene id symbol gene type direction distance location
LOC110526459 LOC106562249 coding upstream 32199 69148330 ~ 69189966 (+)
LOC110526458 LOC106587394 coding upstream 88549 69030882 ~ 69133616 (+)
LOC110526955 LOC106587395 coding upstream 203751 69007055 ~ 69018414 (+)
LOC110526456 LOC106587398 coding upstream 234026 68978897 ~ 68988139 (+)
LOC110526457 LOC106587399 coding upstream 245155 68965055 ~ 68977010 (+)
LOC118964925 NA coding downstream 51700 69280185 ~ 69293194 (+)
trnar-acg-7 NA coding downstream 73847 69302332 ~ 69302404 (+)
LOC110526466 LOC106587388 coding downstream 158840 69387325 ~ 69422563 (+)
LOC110526467 LOC106587383 coding downstream 212884 69441369 ~ 69526649 (+)
pdcd5 LOC106587385 coding downstream 302702 69531187 ~ 69539723 (+)
G538977 NA non-coding upstream 5618 69215567 ~ 69216547 (+)
G538891 NA non-coding upstream 77230 69044070 ~ 69144935 (+)
G538931 NA non-coding upstream 178138 69042621 ~ 69044027 (+)
G538925 NA non-coding upstream 203112 69018849 ~ 69019053 (+)
G538878 NA non-coding upstream 229326 68990838 ~ 68992839 (+)
G538991 NA non-coding downstream 12808 69241293 ~ 69275222 (+)
G538993 LOC106587389 non-coding downstream 79494 69307979 ~ 69309980 (+)
G539105 NA non-coding downstream 180263 69408748 ~ 69427787 (+)
G539138 NA non-coding downstream 241499 69469984 ~ 69471242 (+)
G538877 LOC106582599 other upstream 219337 68996083 ~ 69002828 (+)
G538859 NA other upstream 315318 68906045 ~ 68906847 (+)
G538607 NA other upstream 410275 68811119 ~ 68811890 (+)
G538561 NA other upstream 517469 68704398 ~ 68704696 (+)
G539068 NA other downstream 133156 69361641 ~ 69367642 (+)
G539959 NA other downstream 787857 70015270 ~ 70019477 (+)
LOC110525047 psf2 other downstream 807709 70036194 ~ 70039507 (+)
G540179 NA other downstream 1253465 70481950 ~ 70484368 (+)
LOC110526485 fam92b other downstream 1323310 70551763 ~ 70558098 (+)

Expression


Co-expression Network