LOC110526464


Basic Information

Item Value
gene id LOC110526464
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 69321643 ~ 69329447 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002473961.2
ACGCTAgacttctctctctttacacaTGGCAAAGAGACGGGCCGTCATCTTTCTTCCTCAACATATAGCAAGAGAGTGAGCGACAAATAAACGGAGGAACAGAGATAGAGCAggttgacagagggagagaaggaagtgcTATAGGTTGGCGCTAATTCATGATGTGCAGTTTATACCATCTGAACATAGTCCTTCTCAGCAAACCAGTGACGCGTGTGGCATCAGAAACCAGGGAGGATTGAAGGAAGAAATGCACGCTGTGTCTACTCTGAAGGGAGATGACACTGCATCGTGACTCAAGAGGGCTACCATCCAAGCTGACCTTACAGAACGCTACAACAGAAACGGAGCCACAGCTCAAGGTGAAGAGTTCTGACTTTTGTGGTCCGGGACACTATGGAAGACTAGtgattttgttgttgtaaattcAGCACCCAGACAACAAGTCATAGTCTACCTCAGTGTCCAGAACTCATGCATCAATGACACCTCAAGCTTTTAGTAGAGACATAATCGTACAACGCTTAGGAAGAGTGGACTCTTTTTTTTGAAATTGTAGGATGCACTGTAACCTATTGTCATTTCCTATGGCTCATGTGTTCTTTGACATTTCATCATAAATTCACATAATGTAAGTCTATTACCATTAAAGAAAACTCTCCATCTTGACTGAGGCAACTTTTAATCTTCTTTTAAAATATAATGGCTTTTGTCAGTTGTGTGTTTAGGCTGCATCTGATGTTAAAATTGACACGTTTCAGCCAGAGGCTTCAATCATCAGATGCTGATGAAGACTTTATGGCTGGCCAAAATGGGTCCATTGTGAGTGTTGATATGGAATAAATACTCATACTTAATCCTCTTCGTTCCTATGTGGAACACAAGTTTTCTAAGGGAGAGCGCCACTGCTGCTGATCTCCAGCCTTTTTGGGAAATGTATTGAAATATGTTATAAAATAATGGATTATGTGTTGTGATTTCTTATTCGATCAAGTCTTAAGAAATCTTATCGTAGGTCCTTAACTTCTTCTTTAGTGTTACCAATCAGAAGGTTattaacactgtaataacacaatGCACACACTCTGTTTACAGATATCATTCCATGGCCCTTGAGTAGCAAATAGTAAGTACTAAGCCTTGGACAGGAAAGCCTTGTCCGTGCCAGACGGACAATAGTGCCAAATGACTATGTATAATTTCCCAGCAGTATAGCCTTGATCAATGTAGTGAAATTCTAGACCTCTATCgaattttaaataaatttgcCGCAAGGAAAGAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002473961.2 True 1285 mRNA 0.40 2 69321643 69329447

Neighbor

gene id symbol gene type direction distance location
LOC110526463 LOC106587389 coding downstream 4147 69305573 ~ 69317496 (-)
trnar-acg-6 NA coding downstream 20429 69301142 ~ 69301214 (-)
LOC110526462 NA coding downstream 32481 69272988 ~ 69289496 (-)
LOC118964924 LOC106562250 coding downstream 49352 69125027 ~ 69272291 (-)
LOC110526956 NA coding downstream 300927 69018661 ~ 69020716 (-)
LOC110526465 LOC106587363 coding upstream 37612 69367059 ~ 69464483 (-)
LOC110526474 LOC106562278 coding upstream 329036 69658483 ~ 69695479 (-)
LOC110526478 foxf1 coding upstream 406127 69735574 ~ 69739533 (-)
irf8 NA coding upstream 628634 69958081 ~ 69966024 (-)
dusp22a ds22a coding upstream 646498 69975945 ~ 70014932 (-)
G539398 NA non-coding downstream 155238 69133863 ~ 69166405 (-)
G539382 LOC103462559 non-coding downstream 201007 69118367 ~ 69120636 (-)
G539383 LOC106587394 non-coding downstream 217117 69094225 ~ 69104526 (-)
G539523 NA non-coding upstream 13760 69343207 ~ 69349887 (-)
G539555 NA non-coding upstream 79290 69408737 ~ 69411329 (-)
G539590 LOC106587385 non-coding upstream 201768 69531215 ~ 69539722 (-)
G539633 NA non-coding upstream 214236 69543683 ~ 69547459 (-)
G539635 NA non-coding upstream 220122 69549569 ~ 69550729 (-)
G539306 NA other downstream 315978 69002743 ~ 69005665 (-)
LOC110526455 LOC106587401 other downstream 367979 68949510 ~ 68953699 (-)
LOC110526447 LOC106587408 other downstream 510413 68807413 ~ 68816777 (-)
G538460 LOC106587433 other downstream 804962 68510315 ~ 68516681 (-)
G539674 LOC106587381 other upstream 286307 69615754 ~ 69616671 (-)
G539714 NA other upstream 359460 69688907 ~ 69690015 (-)
G540376 NA other upstream 774351 70103798 ~ 70107175 (-)
LOC110526488 LOC106562298 other upstream 1321517 70623828 ~ 70666213 (-)
G541798 NA other upstream 2280084 71609531 ~ 71613840 (-)

Expression


Co-expression Network