mvda (erg19)


Basic Information

Item Value
gene id mvda
gene name erg19
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 69541893 ~ 69550751 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607463.2
AGGCGACCGTGGTCTGATCGAAAGGATTGGCTGCCTCGTTTCAGTTACGGAACATGAGTGGCTCTAATTGGTGGGAGGTTTAGTCATGTGCGCTACCCCTCCAATCAACAGAAACGTTTTGTAAAGCGCTAAAGTTGTGCAGACATTACTTTATCAGTGGATCTCAAAATAGTAGACAGTCTCGCGTTTCTAGtaatttttgttattttattgatACGGGTTTTTACTTTTTATCAAAATGCCCGAGGACAGCGGCAAAGAGCTCACCATGGTAACATGCAGTGCGCCTGTGAATATTGCTGTTATCAAATACTGGGGGAAGAGGGATGAAGAGTTGATTCTACCCATAAATTCATCTTTGAGTGTCACATTACATCAAGACCAGCTCAAGACGACCACAACAGTGGCGTGCAGCAGGTTGTTCCAGGAGGATCGTATCTGGCTCAACGGCAAAGAGGAGGACATAACCCAGCCCAGACTACAGTCCTGCCTTAGGGAGATTCGCCGCCTGGCCCGTAAGCGACGTAGTGATGGGGAGGCTGATGTAGACACGGCCGGTTTGTCCCATAAAGTCCACATCTGCTCTGTCAACAACTTCCCAACTGCAGCCGGACTGGCCTCTTCTGCTGCCGGCTATGCCTGTCTGGTGTACACCCTGTCCCGGGTgatgggagtggagggggagttgTCTGTGGTTTCTAGGCAGGGTTCAGGCAGTGCCTGTAGGAGTATGCATGGGGGCTTCGTCCAGTGGATTATGGGCCAGCAAGGAGATGGCAAGGACAGTCTGGCCCAACAGGTGGAGCCAGAGACTCACTGGCCTGAGCTCAGGGTCCTTGTACTGGTGgTCAGTGCTGAGAGGAAACCAGTTGGCAGCACTTCTGGCATGCAAACTAGTGTAGAGACGAGCATTCTCCTgaagCACCGGGCAGACTCTGTGGTCCCAGCCAGGATGAAGGAGATGATTGAGGCTGTACATAAGAGGGACTTTACTGCATTCGCTGAACTGACCATGAAGGACAGCAATCAGTTCCATGCCACTTGCCTGGACACCTACCCACCCATCTTCTACCTCAACGACGTGTCGCGCTGTGTTATCAACCTTGTGCACCGCTATAACCGTCACTACAGGGAAACAAAGGTGGCATACACATTTGATGCAGGTCCCAATGCAGTGATCTACACTCTACAGCAGAATGTGGAAGAGTTTGTCCAGGTGGTCAAACACTTCTTCCCACCAGAGACCAATGGAGGACAGTTTCTAAAGGGTCTTCCGGTTGCCCCAACAACACTATCTGAGGAGCTGAAGCAGGCCATTGGTATGGAGCCCATGGTGAAGGGAATCTGCTATATAATCAGCactaagGCTGGACCTGGACCTCGCGTGGTGGAGGACCCTAGTGAGCATCTGCTTGGATCTGACGGGCTGCCCAAGGAGAGTGCATGATACAAGCCAGCCTCCCAGCTGGGCAGAGACAGAACTCTTTGATGCAAAGAAAGACCAGACATATTAACAATCAACAATTCCAATTCAGTCAATTGGATACATACATAGCTGTAGTCataaaaggggcaatctgcagttgctatatcaatttttggacttataaatgtaTTATATGTAACCATTGAAGAAGATAACTGATAAATGCTgcatgagtttagttcaactgtcgtaccccatcagaactcaaaatataagcttgttttactacaATGTTTGTAAAccaagtaaatgtaaacaaacgtttaaaacatggttataactataattttgatatcatgcatggtcagtccttgcatccatagcaccGTCTAattttgagtggttacatttctcctgccccatccctcagctttttaccaaaacaaaggattgcccctttaactggAGCGAAACAACCACACACAGCTGAATACCTCTAACACTGTTGACTAGTGATTCATTCGGACACTTTTCCTATTGCGAGTTTGGattaaatgttttgtaatgtTAAAGATGTAGAGATGCCTTGTGAGAATGATCAGAAATGTTTTAGTACTTTGATAACTGTGAACTCTGTTGATTTGATTCAAGTAGATTATGTAATTATGTACATGATTATGTCCATGTTATTAAAATATAATGGTTAACAGTCACCTTTAGAGTGAGTGAATCATAAGAATCTAATTGAAATTGTTAACCATTCAAAAGGATTATAAATTACAGTATTGAGAACGATGTCAGTGCTTTAGTATAAGAGCTGGATATATAGCCTTCATGTCATCTTCAGAGGTGGCACCACAGGCCCCAGAGTGGTGGGGGCATTTTTTTTTCTCCTGATGGTAACCAGGTAAAACTACAAAAACTCTACAACCTAGTTGTAGCAGGGACCTTAAGGGTTGCCCTATTGCCTGGGGCAAGTGAACTGAGCAGTCGGGCAAGTTGAGTCTGCTTTAAAGTTGCCCCAGCTAAAAATGTTTTACTGAAAACAAAACTGTAAGGAATTCCAATAGGCATAGCCTAAAACTGATCTTTCTGCTTCATCCCCCATTGTTTAAGTCAGGgtgtcacggcagatttcctctgaagaggtgtagcaaggatcggaccaaaatgcagcgtgGCGGCCATCCGAGGGGAGCAGTGGGAGCCCATCCTGCCCTGGAAGGAGAGTGCCCGTAAGCCGGTGGGAGAGAGCATCAAGCTCCCTCCCCAGAACCCTCCACCACGCCCACCCGCAGAGATGCGCAGGAAACGGGCAGAGGACCTGGAGGCGGCTGCCTATGTCAACCCCATCGCTGTCACTGCCAATGATGACTAGATCCGCTTACTGTTCCTCCTTCAGGCCTGTTGGGCTAAGCTCACTCAGGTTAGCTTATGGTTCCACTGAGCCCCAACCAAAACAGATCTACAGTGGAGCCCCACCCAGGCCATGCTCAGTCTCGACTGCCTTTGGCTGAGGGCCGAATCCTAAATTGAGATGGATAAGCTTGCATAACTTAGGTTTTATGTAAATTGGGAATTGGCGTCAATGGGAATTTTTTATGGACTGGTATCAAGTTAGGAATCAGGCCTCGGAGAGTAGAGGGTTGTGGAGAGGACACACTGCTGCTGATGTTTGATGATGTATAAGGGATTGTATTGAACTGAGATGTTGCTGCGCCTTAGTTACTGCAAAAGGGTTGTGTCCTATATCTCTGCACCACCTGCCACATCTCTTTCAGTTATAATTTTGGTCCCCAAAAGGCTTTGGAATGTAAATGGAAAAGTTTGTATTCTTGTTGCGACAGTAACTTATTTTGAGAGCAATTGAACAAATGGATATCTATTTCTCTTTTTGGTCGGTTTACTATGTCAGTGGTCAACTAGCTGTATTCTGGACAGTTGTGTATTCACCTCTCTACAAAATAATGTATGTCTATGTTTTATGCTTGTTATGCTTTTGATACAATCTGAaaataaacatacagtgccttgcgaaacta
>TU610619
TCGCGacgattgtacatccgctaagaaaagtcagaAAACTcaaaaacaacatcaatggagaagtcaacatacacGTGCGGCCATCCGAGGGGAGCAGTGGGAGCCCATCCTGCCCTGGAAGGAGAGTGCCCGTAAGCCGGTGGGAGAGAGCATCAAGCTCCCTCCCCAGAACCCTCCACCACGCCCACCCGCAGAGATGCGCAGGAAACGGGCAGAGGACCTGGAGGCGGCTGCCTATGTCAACCCCATCGCTGTCACTGCCAATGATGACTAGATCCGCTTACTGTTCCTCCTTCAGGCCTGTTGGGCTAAGCTCACTCAGGTTAGCTTATGGTTCCACTGAGCCCCAACCAAAACAGATCTACAGTGGAGCCCCACCCAGGCCATGCTCAGTCTCGACTGCCTTTGGCTGAGGGCCGAATCCTAAATTGAGATGGATAAGCTTGCATAACTTAGGTTTTATGTAAATTGGGAATTGGCGTCAATGGGAATTTTTTATGGACTGGTATCAAGTTAGGAATCAGGCCTCGGAGAGTAGAGGGTTGTGGAGAGGACACACTGCTGCTGATGTTTGATGATGTATAAGGGATTGTATTGAACTGAGATGTTGCTGCGCCTTAGTTACTGCAAAAGGGTTGTGTCCTATATCTCTGCACCACCTGCCACATCTCTTTCAGTTATAATTTTGGTCCCCAAAAGGCTTTGGAATGTAAATGGAAAAGTTTGTATTCTTGTTGCGACAGTAACTTATTTTGAGAGCAATTGAACAAATGGATATCTATTTCTCTTTTTGGTCGGTTTACTATGTCAGTGGTCAACTAGCTGTATTCTGGACAGTTGTGTATTCACCTCTCTACAAAATAATGTATGTCTATGTTTTATGCTTGTTATGCTTTTGATACAATCT

Function

NR:

description
cytochrome b-245 light chain-like isoform X2

GO:

id name namespace
GO:0008299 isoprenoid biosynthetic process biological_process
GO:0004163 diphosphomevalonate decarboxylase activity molecular_function
GO:0005524 ATP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607463.2 False 3468 mRNA 0.46 11 69541893 69550751
TU610619 True 907 lncRNA 0.47 2 69547385 69550720

Neighbor

gene id symbol gene type direction distance location
pdcd5 LOC106587385 coding upstream 2170 69531187 ~ 69539723 (+)
LOC110526467 LOC106587383 coding upstream 15244 69441369 ~ 69526649 (+)
LOC110526466 LOC106587388 coding upstream 119330 69387325 ~ 69422563 (+)
trnar-acg-7 NA coding upstream 239489 69302332 ~ 69302404 (+)
LOC118964925 NA coding upstream 248699 69280185 ~ 69293194 (+)
LOC110526470 LOC106587382 coding downstream 1748 69552499 ~ 69583243 (+)
mc1r mc1r_par1 coding downstream 39294 69590045 ~ 69591263 (+)
LOC110526471 tbb3 coding downstream 48402 69599153 ~ 69604659 (+)
LOC110526473 LOC106587381 coding downstream 59811 69610562 ~ 69642119 (+)
LOC110526472 LOC106587380 coding downstream 91524 69642275 ~ 69654389 (+)
G539139 NA non-coding upstream 64554 69474348 ~ 69477339 (+)
G539138 NA non-coding upstream 70651 69469984 ~ 69471242 (+)
G539105 NA non-coding upstream 114106 69408748 ~ 69427787 (+)
G538993 LOC106587389 non-coding upstream 231913 69307979 ~ 69309980 (+)
G539213 NA non-coding downstream 107747 69658498 ~ 69660305 (+)
G539239 NA non-coding downstream 136197 69686948 ~ 69687800 (+)
G539258 NA non-coding downstream 169185 69719936 ~ 69720174 (+)
G539265 NA non-coding downstream 194712 69745463 ~ 69745782 (+)
G539272 NA non-coding downstream 207135 69757886 ~ 69758091 (+)
G539068 NA other upstream 174251 69361641 ~ 69367642 (+)
LOC110526955 LOC106587395 other upstream 529931 69007055 ~ 69018414 (+)
G538877 LOC106582599 other upstream 539065 68996083 ~ 69002828 (+)
G538859 NA other upstream 635046 68906045 ~ 68906847 (+)
G538607 NA other upstream 730003 68811119 ~ 68811890 (+)
G539959 NA other downstream 465591 70015270 ~ 70019477 (+)
LOC110525047 psf2 other downstream 485443 70036194 ~ 70039507 (+)
G540179 NA other downstream 931199 70481950 ~ 70484368 (+)
LOC110526485 fam92b other downstream 1001044 70551763 ~ 70558098 (+)
cmc2 cmc2 other downstream 1064774 70615476 ~ 70621510 (+)

Expression


Co-expression Network