trnav-cac-7


Basic Information

Item Value
gene id trnav-cac-7
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 69700065 ~ 69700137 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnav-cac-7
gtttccgtagtgtagtggttatcacgttcgcctcacacgcgaaaggtccccggttcgaaaccgggcggaaaca

Function

NR:

description
PREDICTED: interferon-induced protein 44-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnav-cac-7 True 73 mRNA 0.56 1 69700065 69700137

Neighbor

gene id symbol gene type direction distance location
LOC110526472 LOC106587380 coding upstream 45676 69642275 ~ 69654389 (+)
LOC110526473 LOC106587381 coding upstream 57946 69610562 ~ 69642119 (+)
LOC110526471 tbb3 coding upstream 95406 69599153 ~ 69604659 (+)
mc1r mc1r_par1 coding upstream 108802 69590045 ~ 69591263 (+)
LOC110526470 LOC106587382 coding upstream 116822 69552499 ~ 69583243 (+)
gas8 gas8 coding downstream 150 69700287 ~ 69708734 (+)
LOC110526477 mthfsd coding downstream 24361 69724498 ~ 69732656 (+)
LOC118964926 NA coding downstream 39482 69739619 ~ 69756833 (+)
emc8 LOC106587369 coding downstream 326025 70026162 ~ 70028929 (+)
LOC110525047 psf2 coding downstream 336851 70036194 ~ 70039507 (+)
G539239 NA non-coding upstream 12265 69686948 ~ 69687800 (+)
G539213 NA non-coding upstream 39760 69658498 ~ 69660305 (+)
mvda erg19 non-coding upstream 149345 69541893 ~ 69550751 (+)
G539139 NA non-coding upstream 222726 69474348 ~ 69477339 (+)
G539138 NA non-coding upstream 228823 69469984 ~ 69471242 (+)
G539258 NA non-coding downstream 19799 69719936 ~ 69720174 (+)
G539265 NA non-coding downstream 45326 69745463 ~ 69745782 (+)
G539272 NA non-coding downstream 57749 69757886 ~ 69758091 (+)
G539278 NA non-coding downstream 62408 69762545 ~ 69762761 (+)
G539783 NA non-coding downstream 80047 69780184 ~ 69780410 (+)
G539068 NA other upstream 332423 69361641 ~ 69367642 (+)
LOC110526955 LOC106587395 other upstream 688103 69007055 ~ 69018414 (+)
G538877 LOC106582599 other upstream 697237 68996083 ~ 69002828 (+)
G538859 NA other upstream 793218 68906045 ~ 68906847 (+)
G538607 NA other upstream 888175 68811119 ~ 68811890 (+)
G539959 NA other downstream 316205 70015270 ~ 70019477 (+)
G540179 NA other downstream 781813 70481950 ~ 70484368 (+)
LOC110526485 fam92b other downstream 851658 70551763 ~ 70558098 (+)
cmc2 cmc2 other downstream 915388 70615476 ~ 70621510 (+)

Expression


Co-expression Network