emc8 (LOC106587369)


Basic Information

Item Value
gene id emc8
gene name LOC106587369
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 70026162 ~ 70028929 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607491.2
TTTCACAgcggtacgtgtgtgtgtgtaatatggtGCCGGTGCAAACCACCAGAGAGAAGCCAAGCAGCGTTCATTTGTAGTAGGATATAACGTTACCGTCGTGACCAACAACATTAATGCACTGTAACATTCACGAAGAGTTGCCTTTATGTAGGTAGCTAGTTATAAGAGACTCGATTACCGTAGTCAACCTGGCAGagctgtcactgtctctctgttgtaTCGGGTATGATATCCGTTGGCTAGCTGTAAAGCTAGCAGTCTCCAGACCATCCTTGTACAATTAGCTAGTTTAGTGTTTATCTCGAAATGAGAATGAGTATTAAATTGACAACTCAGGCCTATTGCAAGATGCTTTTGCATGCTGCTAAATATCCCCATTGCGCCGTGaacggattactggttgctgagaaacagaaggagaagaaAAAAGACAGCCACTCCACTCCAATCCTCTGTGTGGATTGTATACCACTATTCCACGGCACACTTGCATTGGCACCTATGCTGGAAGTGGCACTTACATTGATTGACACGTGGTGTAAAGAGAACAAATATGTCATAGCTGGGTATTACCAGGCCAACGAGCGCACAAAGGACTTCAGACCTAACCAGGTTTCTGAAAAAGTTGGGGCCAGGATTGCAGAGAACTTCAGCGAAGCAGCAATGATTATGGTGGACAGCACCAGATTCACCATGGGCTGCTATGAGCCCATATTAGCCATCTATGACCACCATGAAAACAAGTGGAAATGCAGGGACTGTAATGTggacAGCTTTGACGACTGGTGTGAGGCTCAGAAGATCACGTCGGCTCTGCTGGAGGGCAGGTCCTACGAGAGCCTGATCGACTTCGACAATCACCTAGACGACCTCAGGAATGACTGGACCAACCCTGAGATCAACAAGTCTGTCCTGCACCTGTGCTAAGCCTCCCAGCTGAGTGACTGCACTGCACCAGACAAAGACATTGCGGCCAAAACGGCGTTGGACGTGCTAATACTACTGTAGCGCAGGAATGCTGAATGCTAAGGCTTTGTTCCCAGTGAATTGCTCTCACAGGGAAGAGAGCTTTCAGAGCACTGGTCAGTCTATTTTCATGCGCAAGCAGGACACAGGTACCATTGGGATCTTTGTTCCCGTAGTAGGGAGGATCAAGGTGATCAAGACCTAGGTGTCATTCAATGCAACGTGTTAATTTTCTTTCTAATTTTTTGAGTACGGGTTTTGTATGCTAATAGTTAATGAAGATGTATGCGAAATTCTGAATGGTAGGGAAACATGAATATCATTTATTTAGACTTCTATTGAGTACTTTAGGTTCTTTAGAAATAGTAGTGTTTCAGAGATGATAGACATTATAAATTATTGTTCTGAGATTTGACTTATTGAAATATTACAGAATTGTAATCAACAAGAGAGATgttatgttttttatttcactACCTTAATGTTTATATTCTCAGAACTGTTTCACTCCTGTTTTCTTATAAGAGATGGCTTAGTATTTATTTGTTAAAGGATGATCTGATTATTCTTTACTTTATTTGTTGAAATAAATCTTGTTATTGCATAAGTAATAAACTAAGTCACTTGGGATTAAAGCATTTGCTAAATgtccatattattattattgttgattCATGAATTATATATTTCGGGTTGGATTAAGATATAAAAgcctaaataaaataatttgaGGTTTTGAGATATTAAACCTTTTTGTAAAAAAACATTTGGACTGAATGTACAAATAAAATGTAACTTTTCAG

Function

NR:

description
ER membrane protein complex subunit 8-like

GO: NA

KEGG:

id description
K23569 EMC8_9; ER membrane protein complex subunit 8/9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607491.2 True 1772 mRNA 0.40 5 70026162 70028929

Neighbor

gene id symbol gene type direction distance location
LOC118964926 NA coding upstream 269329 69739619 ~ 69756833 (+)
LOC110526477 mthfsd coding upstream 293506 69724498 ~ 69732656 (+)
gas8 gas8 coding upstream 317428 69700287 ~ 69708734 (+)
trnav-cac-7 NA coding upstream 326025 69700065 ~ 69700137 (+)
LOC110526472 LOC106587380 coding upstream 371773 69642275 ~ 69654389 (+)
LOC110525047 psf2 coding downstream 8059 70036194 ~ 70039507 (+)
LOC110526484 LOC106587367 coding downstream 20221 70049150 ~ 70058063 (+)
LOC110526485 fam92b coding downstream 522834 70551763 ~ 70558098 (+)
si:ch73-103b9.2 cssa26h16orf46 coding downstream 565818 70594747 ~ 70599188 (+)
cmc2 cmc2 coding downstream 586547 70615476 ~ 70621510 (+)
G539959 NA non-coding upstream 9032 70015270 ~ 70019477 (+)
G539949 NA non-coding upstream 23339 70002196 ~ 70002823 (+)
G539927 NA non-coding upstream 42645 69981682 ~ 69983517 (+)
G539925 NA non-coding upstream 50864 69975094 ~ 69975298 (+)
G539904 NA non-coding upstream 84433 69941513 ~ 69941729 (+)
G539980 NA non-coding downstream 17884 70046813 ~ 70047132 (+)
G539985 NA non-coding downstream 25288 70054217 ~ 70054496 (+)
G539986 NA non-coding downstream 31038 70059967 ~ 70061147 (+)
G540008 NA non-coding downstream 61031 70089960 ~ 70090983 (+)
G539068 NA other upstream 658520 69361641 ~ 69367642 (+)
LOC110526955 LOC106587395 other upstream 1014200 69007055 ~ 69018414 (+)
G538877 LOC106582599 other upstream 1023334 68996083 ~ 69002828 (+)
G538859 NA other upstream 1119315 68906045 ~ 68906847 (+)
G540179 NA other downstream 453021 70481950 ~ 70484368 (+)
G541903 NA other downstream 1771111 71800040 ~ 71804462 (+)

Expression


Co-expression Network