Item | Value |
---|---|
gene id | LOC118964927 |
gene name | NA |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 70498546 ~ 70503416 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_005052226.1 | False | 4607 | mRNA | 0.49 | 3 | 70498546 | 70503416 |
XR_005052227.1 | False | 4720 | mRNA | 0.49 | 3 | 70498546 | 70503416 |
XR_005052228.1 | False | 4722 | mRNA | 0.49 | 3 | 70498546 | 70503416 |
XR_005052229.1 | False | 4606 | mRNA | 0.49 | 3 | 70498546 | 70503416 |
XR_005052230.1 | False | 4503 | mRNA | 0.49 | 3 | 70498546 | 70503416 |
XR_005052231.1 | True | 4731 | mRNA | 0.49 | 3 | 70498546 | 70503416 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110526482 | LOC106587370 | coding | downstream | 474024 | 70015270 ~ 70024522 (-) |
dusp22a | ds22a | coding | downstream | 483614 | 69975945 ~ 70014932 (-) |
irf8 | NA | coding | downstream | 532522 | 69958081 ~ 69966024 (-) |
LOC110526478 | foxf1 | coding | downstream | 759013 | 69735574 ~ 69739533 (-) |
LOC110526474 | LOC106562278 | coding | downstream | 803067 | 69658483 ~ 69695479 (-) |
LOC118964928 | NA | coding | upstream | 23680 | 70527096 ~ 70556412 (-) |
LOC110526959 | LOC106587454 | coding | upstream | 89142 | 70592558 ~ 70593481 (-) |
LOC110526960 | atmin | coding | upstream | 96585 | 70600001 ~ 70613388 (-) |
LOC110526488 | LOC106562298 | coding | upstream | 120412 | 70623828 ~ 70666213 (-) |
mafa | maf | coding | upstream | 512631 | 71016047 ~ 71136889 (-) |
G540614 | NA | non-coding | downstream | 3098 | 70495113 ~ 70495448 (-) |
G540610 | NA | non-coding | downstream | 11266 | 70486935 ~ 70487280 (-) |
G540609 | NA | non-coding | downstream | 11670 | 70486606 ~ 70486876 (-) |
G540608 | NA | non-coding | downstream | 12504 | 70485556 ~ 70486042 (-) |
G540604 | NA | non-coding | downstream | 17185 | 70481154 ~ 70481361 (-) |
G540625 | NA | non-coding | upstream | 3047 | 70506463 ~ 70506668 (-) |
G540626 | NA | non-coding | upstream | 3926 | 70507342 ~ 70507894 (-) |
G540629 | NA | non-coding | upstream | 7523 | 70510939 ~ 70511159 (-) |
G540635 | NA | non-coding | upstream | 16869 | 70520285 ~ 70558002 (-) |
G540664 | NA | non-coding | upstream | 73393 | 70576809 ~ 70577015 (-) |
G540376 | NA | other | downstream | 391371 | 70103798 ~ 70107175 (-) |
G539714 | NA | other | downstream | 808531 | 69688907 ~ 69690015 (-) |
G539674 | LOC106587381 | other | downstream | 882227 | 69615754 ~ 69616671 (-) |
LOC110526462 | NA | other | downstream | 1209050 | 69272988 ~ 69289496 (-) |
G539306 | NA | other | downstream | 1492881 | 69002743 ~ 69005665 (-) |
G541798 | NA | other | upstream | 1106115 | 71609531 ~ 71613840 (-) |
G543091 | NA | other | upstream | 2096859 | 72600275 ~ 72721818 (-) |
G543092 | NA | other | upstream | 2156040 | 72659456 ~ 72666713 (-) |
G543224 | LOC106587514 | other | upstream | 2306361 | 72809777 ~ 72810172 (-) |