Item | Value |
---|---|
gene id | LOC110526515 |
gene name | LOC106587477 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 72185072 ~ 72207042 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
id | name | namespace |
---|---|---|
GO:0007268 | chemical synaptic transmission | biological_process |
GO:0007601 | visual perception | biological_process |
GO:0055085 | transmembrane transport | biological_process |
GO:0016021 | integral component of membrane | cellular_component |
id | description |
---|---|
K12302 | SLC17A6_7_8; MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6/7/8 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_005052234.1 | False | 5582 | mRNA | 0.43 | 13 | 72185072 | 72207042 |
XM_021607552.2 | True | 5611 | mRNA | 0.43 | 12 | 72185073 | 72207042 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110526514 | LOC106563530 | coding | upstream | 3763 | 72157190 ~ 72181309 (+) |
LOC110526510 | pkp3 | coding | upstream | 49609 | 72117738 ~ 72135463 (+) |
LOC110526509 | LOC106563533 | coding | upstream | 86827 | 72074150 ~ 72098245 (+) |
LOC110526507 | LOC106587468 | coding | upstream | 163197 | 72011095 ~ 72021875 (+) |
LOC118964930 | NA | coding | upstream | 217270 | 71961924 ~ 71967802 (+) |
LOC110526517 | LOC106587478 | coding | downstream | 14306 | 72221348 ~ 72244464 (+) |
LOC100136249 | LOC100136249 | coding | downstream | 79989 | 72287031 ~ 72294897 (+) |
mybpc3 | LOC106587482 | coding | downstream | 90951 | 72297993 ~ 72339964 (+) |
LOC118965108 | NA | coding | downstream | 125594 | 72332636 ~ 72332690 (+) |
LOC110526523 | LOC106587484 | coding | downstream | 363775 | 72570817 ~ 72595606 (+) |
G542092 | NA | non-coding | upstream | 42513 | 72141516 ~ 72142559 (+) |
G542022 | NA | non-coding | upstream | 182853 | 72001916 ~ 72002219 (+) |
G542021 | NA | non-coding | upstream | 183851 | 72001016 ~ 72001221 (+) |
G542011 | NA | non-coding | upstream | 207591 | 71977214 ~ 71977481 (+) |
G542010 | NA | non-coding | upstream | 208131 | 71976616 ~ 71976941 (+) |
G542137 | NA | non-coding | downstream | 67274 | 72274316 ~ 72292811 (+) |
G542162 | NA | non-coding | downstream | 89702 | 72296744 ~ 72296989 (+) |
G542131 | LOC106587483 | non-coding | downstream | 134870 | 72341912 ~ 72343982 (+) |
G542179 | NA | non-coding | downstream | 137895 | 72344937 ~ 72345730 (+) |
G542180 | NA | non-coding | downstream | 139785 | 72346827 ~ 72347198 (+) |
G542100 | LOC106587475 | other | upstream | 32678 | 72151020 ~ 72152394 (+) |
G542053 | NA | other | upstream | 82598 | 72101380 ~ 72102474 (+) |
G541903 | NA | other | upstream | 380610 | 71800040 ~ 71804462 (+) |
cmc2 | cmc2 | other | upstream | 1563598 | 70615476 ~ 70621510 (+) |
LOC110526485 | fam92b | other | upstream | 1631152 | 70551763 ~ 70558098 (+) |
saa | saa | other | downstream | 458418 | 72665460 ~ 72666872 (+) |
G542890 | NA | other | downstream | 558639 | 72765681 ~ 72766851 (+) |
LOC110526543 | LOC106587517 | other | downstream | 831579 | 73037953 ~ 73182742 (+) |
LOC100136290 | sox6 | other | downstream | 1165763 | 73190979 ~ 73392251 (+) |
G544565 | NA | other | downstream | 2080736 | 74287778 ~ 74288138 (+) |