LOC118965108


Basic Information

Item Value
gene id LOC118965108
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 72332636 ~ 72332690 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052440.1
GAAAATTTGCTCTTTTAGTATTtgtccagtaggtttcctcaaggagaaagctCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052440.1 True 55 mRNA 0.40 1 72332636 72332690

Neighbor

gene id symbol gene type direction distance location
LOC100136249 LOC100136249 coding upstream 37739 72287031 ~ 72294897 (+)
LOC110526517 LOC106587478 coding upstream 88172 72221348 ~ 72244464 (+)
LOC110526515 LOC106587477 coding upstream 125594 72185072 ~ 72207042 (+)
LOC110526514 LOC106563530 coding upstream 151327 72157190 ~ 72181309 (+)
LOC110526510 pkp3 coding upstream 197173 72117738 ~ 72135463 (+)
LOC110526523 LOC106587484 coding downstream 238127 72570817 ~ 72595606 (+)
LOC110526524 LOC106587487 coding downstream 281005 72613695 ~ 72631381 (+)
LOC110526527 lin7c coding downstream 300091 72632781 ~ 72638350 (+)
LOC110526528 LOC106587490 coding downstream 309061 72641751 ~ 72643688 (+)
frih frih coding downstream 321745 72654435 ~ 72658903 (+)
G542162 NA non-coding upstream 35647 72296744 ~ 72296989 (+)
G542137 NA non-coding upstream 39825 72274316 ~ 72292811 (+)
G542092 NA non-coding upstream 190077 72141516 ~ 72142559 (+)
G542022 NA non-coding upstream 330417 72001916 ~ 72002219 (+)
G542021 NA non-coding upstream 331415 72001016 ~ 72001221 (+)
G542131 LOC106587483 non-coding downstream 9222 72341912 ~ 72343982 (+)
G542179 NA non-coding downstream 12247 72344937 ~ 72345730 (+)
G542180 NA non-coding downstream 14137 72346827 ~ 72347198 (+)
G542181 NA non-coding downstream 14760 72347450 ~ 72348095 (+)
G542183 NA non-coding downstream 17396 72350086 ~ 72350298 (+)
G542100 LOC106587475 other upstream 180242 72151020 ~ 72152394 (+)
G542053 NA other upstream 230162 72101380 ~ 72102474 (+)
G541903 NA other upstream 528174 71800040 ~ 71804462 (+)
cmc2 cmc2 other upstream 1711162 70615476 ~ 70621510 (+)
LOC110526485 fam92b other upstream 1778716 70551763 ~ 70558098 (+)
saa saa other downstream 332770 72665460 ~ 72666872 (+)
G542890 NA other downstream 432991 72765681 ~ 72766851 (+)
LOC110526543 LOC106587517 other downstream 705931 73037953 ~ 73182742 (+)
LOC100136290 sox6 other downstream 1040115 73190979 ~ 73392251 (+)
G544565 NA other downstream 1955088 74287778 ~ 74288138 (+)

Expression


Co-expression Network