Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110526528 |
| gene name | LOC106587490 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 72641751 ~ 72643688 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 60S acidic ribosomal protein P2-like |
| id | name | namespace |
|---|---|---|
| GO:0006414 | translational elongation | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02943 | RP-LP2, RPLP2; large subunit ribosomal protein LP2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021607572.2 | True | 549 | mRNA | 0.50 | 5 | 72641751 | 72643688 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526527 | lin7c | coding | upstream | 3401 | 72632781 ~ 72638350 (+) |
| LOC110526524 | LOC106587487 | coding | upstream | 10370 | 72613695 ~ 72631381 (+) |
| LOC110526523 | LOC106587484 | coding | upstream | 46145 | 72570817 ~ 72595606 (+) |
| mybpc3 | LOC106587482 | coding | upstream | 301787 | 72297993 ~ 72339964 (+) |
| LOC118965108 | NA | coding | upstream | 309061 | 72332636 ~ 72332690 (+) |
| frih | frih | coding | downstream | 10747 | 72654435 ~ 72658903 (+) |
| saa | saa | coding | downstream | 21853 | 72665460 ~ 72666872 (+) |
| LOC110518525 | LOC106587448 | coding | downstream | 24177 | 72667865 ~ 72672678 (+) |
| LOC118964931 | saa | coding | downstream | 45655 | 72689343 ~ 72690657 (+) |
| LOC110526530 | LOC106587515 | coding | downstream | 48100 | 72691788 ~ 72702243 (+) |
| G542781 | NA | non-coding | upstream | 42353 | 72599155 ~ 72599398 (+) |
| G542742 | NA | non-coding | upstream | 45089 | 72596373 ~ 72596662 (+) |
| G542741 | NA | non-coding | upstream | 45770 | 72595744 ~ 72595981 (+) |
| G542250 | NA | non-coding | upstream | 186400 | 72448348 ~ 72455351 (+) |
| G542202 | NA | non-coding | upstream | 266151 | 72375273 ~ 72375600 (+) |
| LOC110526531 | LOC106587514 | non-coding | downstream | 64562 | 72708156 ~ 72815720 (+) |
| G542860 | NA | non-coding | downstream | 72614 | 72716302 ~ 72721047 (+) |
| G542891 | NA | non-coding | downstream | 123223 | 72766911 ~ 72767323 (+) |
| G542894 | NA | non-coding | downstream | 135347 | 72779035 ~ 72780214 (+) |
| G542898 | NA | non-coding | downstream | 149530 | 72793218 ~ 72793696 (+) |
| G542100 | LOC106587475 | other | upstream | 489357 | 72151020 ~ 72152394 (+) |
| G542053 | NA | other | upstream | 539277 | 72101380 ~ 72102474 (+) |
| G541903 | NA | other | upstream | 837289 | 71800040 ~ 71804462 (+) |
| cmc2 | cmc2 | other | upstream | 2020277 | 70615476 ~ 70621510 (+) |
| LOC110526485 | fam92b | other | upstream | 2087831 | 70551763 ~ 70558098 (+) |
| G542890 | NA | other | downstream | 121993 | 72765681 ~ 72766851 (+) |
| LOC110526543 | LOC106587517 | other | downstream | 394933 | 73037953 ~ 73182742 (+) |
| LOC100136290 | sox6 | other | downstream | 729117 | 73190979 ~ 73392251 (+) |
| G544565 | NA | other | downstream | 1644090 | 74287778 ~ 74288138 (+) |
