frih (frih)


Basic Information

Item Value
gene id frih
gene name frih
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 72654435 ~ 72658903 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001160521.1
ACACATATCAGTTTGCAGACGAGAGTAAAGGTTACCTGCTTCAACAGTGCTTGAACGGCAACCTTCTACTCTTTTGAAGCAATTTCTTTTTGATTTCATCCCTTTTGAAAACCAAATTAGATCAAGCTATCCGTAACATCGTAGAAACGAACAATTCGAATCACTCACACCACCTCTTCGGACCAGAAAAAACAAGAAACATGCCTCTGGTGAGACAGAACTTCCATCAGGACTGTGAGGCTGCCATCAACCGGCAGATCAACCTGGAGCTGTACGCTTCCTATGTTTATCTGTCCATGGCGTATTACTTTGATCGTGATGACCAGGCCCTGCACAACTTTGCTAAGTTTTTCAAGAACCAGTCCCACGAAGAACGTGAGCACGCTGAGAAGCTGATGAAAGTTCAGAACCAGAGGGGAGGGAGAATCTTCCTGCAGGACGTCAAGAAACCAGAGAAGGATGAGTGGGGTTGCGGTGTGGAGGCCCTTGAGAGTGCCCTGCAGCTGGAGAAGAGTGTAAACCAGTCCCTGCTGGACCTGCACAAGGTCTGCGCTGATAACAACGACCCACACATGTGTGACTTCATTGAGACACACTACCTGGACGAGCAGGTGAAGTCCATAAAGGAGCTGGGTGACTGGGTGACCAACCTCCGCCGGATGGGTGCCCCCCAGAACGGCATGGCCGAGTACCTGTTTGACAAACACACTTTGGGCAAAGAGAGCACATAGACCCTCCATTTTCTTGCTACATCCTATAGCTGTGTTTGTCTTGCTTGATATATCTATAGGATTGGCATCAATCAAGTTCATCCTTGAATCCTTAGTTTGTGCTATGCTATTCCCTCCCGTTCCTATAAGCCAGTAGCCCTTTCCCCTCCAATTGCCTGTCTAGCCTGTTTGTTTTGACTGCAGTTGTCAATAAATGAAACCCTCTGGATTCTG

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006879 cellular iron ion homeostasis biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0006826 iron ion transport biological_process
GO:0008199 ferric iron binding molecular_function
GO:0004322 ferroxidase activity molecular_function

KEGG:

id description
K00522 FTH1; ferritin heavy chain

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001160521.1 True 944 mRNA 0.48 5 72654435 72658903

Neighbor

gene id symbol gene type direction distance location
LOC110526528 LOC106587490 coding upstream 10747 72641751 ~ 72643688 (+)
LOC110526527 lin7c coding upstream 16085 72632781 ~ 72638350 (+)
LOC110526524 LOC106587487 coding upstream 23054 72613695 ~ 72631381 (+)
LOC110526523 LOC106587484 coding upstream 58829 72570817 ~ 72595606 (+)
mybpc3 LOC106587482 coding upstream 314471 72297993 ~ 72339964 (+)
saa saa coding downstream 6638 72665460 ~ 72666872 (+)
LOC110518525 LOC106587448 coding downstream 8962 72667865 ~ 72672678 (+)
LOC118964931 saa coding downstream 30440 72689343 ~ 72690657 (+)
LOC110526530 LOC106587515 coding downstream 32885 72691788 ~ 72702243 (+)
LOC110526531 LOC106587514 coding downstream 49253 72708156 ~ 72815720 (+)
G542781 NA non-coding upstream 55037 72599155 ~ 72599398 (+)
G542742 NA non-coding upstream 57773 72596373 ~ 72596662 (+)
G542741 NA non-coding upstream 58454 72595744 ~ 72595981 (+)
G542250 NA non-coding upstream 199084 72448348 ~ 72455351 (+)
G542202 NA non-coding upstream 278835 72375273 ~ 72375600 (+)
G542860 NA non-coding downstream 57399 72716302 ~ 72721047 (+)
G542891 NA non-coding downstream 108008 72766911 ~ 72767323 (+)
G542894 NA non-coding downstream 120132 72779035 ~ 72780214 (+)
G542898 NA non-coding downstream 134315 72793218 ~ 72793696 (+)
G542100 LOC106587475 other upstream 502041 72151020 ~ 72152394 (+)
G542053 NA other upstream 551961 72101380 ~ 72102474 (+)
G541903 NA other upstream 849973 71800040 ~ 71804462 (+)
cmc2 cmc2 other upstream 2032961 70615476 ~ 70621510 (+)
LOC110526485 fam92b other upstream 2100515 70551763 ~ 70558098 (+)
G542890 NA other downstream 106778 72765681 ~ 72766851 (+)
LOC110526543 LOC106587517 other downstream 379718 73037953 ~ 73182742 (+)
LOC100136290 sox6 other downstream 713902 73190979 ~ 73392251 (+)
G544565 NA other downstream 1628875 74287778 ~ 74288138 (+)

Expression


Co-expression Network