LOC118965112


Basic Information

Item Value
gene id LOC118965112
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 73017408 ~ 73017539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052444.1
TATGCACCCTAACCCAACGGCCATATCAAATGAATGGTATGATCTTGTCAGGTGTGCTAAAATCAATGCGTTCCTTGTCGCCTTTCTCTGAAGCTGCTGTGCCGTTGAAAGTGAATTCAAGGTTCAACATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052444.1 True 132 mRNA 0.43 1 73017408 73017539

Neighbor

gene id symbol gene type direction distance location
LOC110525049 LOC106587503 coding upstream 3984 73011717 ~ 73013424 (+)
LOC110526539 LOC106587506 coding upstream 15865 72990006 ~ 73001543 (+)
LOC110526537 ext2 coding upstream 110402 72884477 ~ 72907006 (+)
LOC110526536 LOC106562320 coding upstream 133370 72831984 ~ 72884038 (+)
LOC110526532 LOC106562322 coding upstream 186928 72826597 ~ 72830480 (+)
LOC118965096 NA coding downstream 1516 73019055 ~ 73019257 (+)
LOC118965119 NA coding downstream 2033 73019572 ~ 73019700 (+)
LOC110526543 LOC106587517 coding downstream 20414 73037953 ~ 73182742 (+)
LOC100136290 sox6 coding downstream 173440 73190979 ~ 73392251 (+)
LOC110526546 LOC106587531 coding downstream 599289 73616828 ~ 73634948 (+)
G542994 NA non-coding upstream 29946 72987256 ~ 72987462 (+)
G542916 NA non-coding upstream 165308 72851648 ~ 72852100 (+)
G542906 NA non-coding upstream 184677 72832504 ~ 72832731 (+)
G542843 sdhaf2 non-coding upstream 190976 72823236 ~ 72826432 (+)
G542905 NA non-coding upstream 196437 72819924 ~ 72820971 (+)
G543009 NA non-coding downstream 10661 73028200 ~ 73028554 (+)
G543012 NA non-coding downstream 13988 73031527 ~ 73031864 (+)
G543013 NA non-coding downstream 14577 73032116 ~ 73032334 (+)
G543014 NA non-coding downstream 14972 73032511 ~ 73032760 (+)
G543016 NA non-coding downstream 17575 73035114 ~ 73035455 (+)
G542890 NA other upstream 250557 72765681 ~ 72766851 (+)
saa saa other upstream 350536 72665460 ~ 72666872 (+)
G542100 LOC106587475 other upstream 865014 72151020 ~ 72152394 (+)
G542053 NA other upstream 914934 72101380 ~ 72102474 (+)
G541903 NA other upstream 1212946 71800040 ~ 71804462 (+)
G544565 NA other downstream 1270239 74287778 ~ 74288138 (+)
G545485 NA other downstream 2220261 75237800 ~ 75238164 (+)
G545601 NA other downstream 2404322 75421861 ~ 75422752 (+)

Expression


Co-expression Network