LOC118965096


Basic Information

Item Value
gene id LOC118965096
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 73019055 ~ 73019257 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118965096
TCAATGTGGACATCCGGTAAGGTTGCTCTTGCATGGCTCTGTCCAAGTGGCTTATAGGAGCGTAGGACTACAGTGCCGTGCCACAACATTGACAGCAAGCCTGTTCCCAGCCTTTGGGCTGGTAGGGATGGCATCCTGCATATTCCTGCCTTCCCAGAGCCTCTGGGCCATGACTGGGGAGGCAAACCATGTAGTGCACAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118965096 True 203 mRNA 0.54 1 73019055 73019257

Neighbor

gene id symbol gene type direction distance location
LOC118965112 NA coding upstream 1516 73017408 ~ 73017539 (+)
LOC110525049 LOC106587503 coding upstream 5631 73011717 ~ 73013424 (+)
LOC110526539 LOC106587506 coding upstream 17512 72990006 ~ 73001543 (+)
LOC110526537 ext2 coding upstream 112049 72884477 ~ 72907006 (+)
LOC110526536 LOC106562320 coding upstream 135017 72831984 ~ 72884038 (+)
LOC118965119 NA coding downstream 315 73019572 ~ 73019700 (+)
LOC110526543 LOC106587517 coding downstream 18696 73037953 ~ 73182742 (+)
LOC100136290 sox6 coding downstream 171722 73190979 ~ 73392251 (+)
LOC110526546 LOC106587531 coding downstream 597571 73616828 ~ 73634948 (+)
LOC110526547 LOC106587501 coding downstream 706870 73726127 ~ 73731840 (+)
G542994 NA non-coding upstream 31593 72987256 ~ 72987462 (+)
G542916 NA non-coding upstream 166955 72851648 ~ 72852100 (+)
G542906 NA non-coding upstream 186324 72832504 ~ 72832731 (+)
G542843 sdhaf2 non-coding upstream 192623 72823236 ~ 72826432 (+)
G542905 NA non-coding upstream 198084 72819924 ~ 72820971 (+)
G543009 NA non-coding downstream 8943 73028200 ~ 73028554 (+)
G543012 NA non-coding downstream 12270 73031527 ~ 73031864 (+)
G543013 NA non-coding downstream 12859 73032116 ~ 73032334 (+)
G543014 NA non-coding downstream 13254 73032511 ~ 73032760 (+)
G543016 NA non-coding downstream 15857 73035114 ~ 73035455 (+)
G542890 NA other upstream 252204 72765681 ~ 72766851 (+)
saa saa other upstream 352183 72665460 ~ 72666872 (+)
G542100 LOC106587475 other upstream 866661 72151020 ~ 72152394 (+)
G542053 NA other upstream 916581 72101380 ~ 72102474 (+)
G541903 NA other upstream 1214593 71800040 ~ 71804462 (+)
G544565 NA other downstream 1268521 74287778 ~ 74288138 (+)
G545485 NA other downstream 2218543 75237800 ~ 75238164 (+)
G545601 NA other downstream 2402604 75421861 ~ 75422752 (+)

Expression


Co-expression Network