Item | Value |
---|---|
gene id | LOC118965119 |
gene name | NA |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 73019572 ~ 73019700 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_005052450.1 | True | 129 | mRNA | 0.43 | 1 | 73019572 | 73019700 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118965096 | NA | coding | upstream | 315 | 73019055 ~ 73019257 (+) |
LOC118965112 | NA | coding | upstream | 2033 | 73017408 ~ 73017539 (+) |
LOC110525049 | LOC106587503 | coding | upstream | 6148 | 73011717 ~ 73013424 (+) |
LOC110526539 | LOC106587506 | coding | upstream | 18029 | 72990006 ~ 73001543 (+) |
LOC110526537 | ext2 | coding | upstream | 112566 | 72884477 ~ 72907006 (+) |
LOC110526543 | LOC106587517 | coding | downstream | 18253 | 73037953 ~ 73182742 (+) |
LOC100136290 | sox6 | coding | downstream | 171279 | 73190979 ~ 73392251 (+) |
LOC110526546 | LOC106587531 | coding | downstream | 597128 | 73616828 ~ 73634948 (+) |
LOC110526547 | LOC106587501 | coding | downstream | 706427 | 73726127 ~ 73731840 (+) |
copb1 | copb | coding | downstream | 714097 | 73733797 ~ 73741617 (+) |
G542994 | NA | non-coding | upstream | 32110 | 72987256 ~ 72987462 (+) |
G542916 | NA | non-coding | upstream | 167472 | 72851648 ~ 72852100 (+) |
G542906 | NA | non-coding | upstream | 186841 | 72832504 ~ 72832731 (+) |
G542843 | sdhaf2 | non-coding | upstream | 193140 | 72823236 ~ 72826432 (+) |
G542905 | NA | non-coding | upstream | 198601 | 72819924 ~ 72820971 (+) |
G543009 | NA | non-coding | downstream | 8500 | 73028200 ~ 73028554 (+) |
G543012 | NA | non-coding | downstream | 11827 | 73031527 ~ 73031864 (+) |
G543013 | NA | non-coding | downstream | 12416 | 73032116 ~ 73032334 (+) |
G543014 | NA | non-coding | downstream | 12811 | 73032511 ~ 73032760 (+) |
G543016 | NA | non-coding | downstream | 15414 | 73035114 ~ 73035455 (+) |
G542890 | NA | other | upstream | 252721 | 72765681 ~ 72766851 (+) |
saa | saa | other | upstream | 352700 | 72665460 ~ 72666872 (+) |
G542100 | LOC106587475 | other | upstream | 867178 | 72151020 ~ 72152394 (+) |
G542053 | NA | other | upstream | 917098 | 72101380 ~ 72102474 (+) |
G541903 | NA | other | upstream | 1215110 | 71800040 ~ 71804462 (+) |
G544565 | NA | other | downstream | 1268078 | 74287778 ~ 74288138 (+) |
G545485 | NA | other | downstream | 2218100 | 75237800 ~ 75238164 (+) |
G545601 | NA | other | downstream | 2402161 | 75421861 ~ 75422752 (+) |