LOC118965119



Basic Information


Item Value
gene id LOC118965119
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 73019572 ~ 73019700 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XR_005052450.1
TGGCACATTTCATTGTCCTGTTCTTCCCTTGTAAGAGCTGAGATATTTCTTATGTGCTAGATAAAACCTTGGAGGTAAATTAGCAGAATGGCTGTTCTGTGCCAACCTGCCAGTCCCCTTCATACATCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005052450.1 True 129 mRNA 0.43 1 73019572 73019700

Neighbor


gene id symbol gene type direction distance location
LOC118965096 NA coding upstream 315 73019055 ~ 73019257 (+)
LOC118965112 NA coding upstream 2033 73017408 ~ 73017539 (+)
LOC110525049 LOC106587503 coding upstream 6148 73011717 ~ 73013424 (+)
LOC110526539 LOC106587506 coding upstream 18029 72990006 ~ 73001543 (+)
LOC110526537 ext2 coding upstream 112566 72884477 ~ 72907006 (+)
LOC110526543 LOC106587517 coding downstream 18253 73037953 ~ 73182742 (+)
LOC100136290 sox6 coding downstream 171279 73190979 ~ 73392251 (+)
LOC110526546 LOC106587531 coding downstream 597128 73616828 ~ 73634948 (+)
LOC110526547 LOC106587501 coding downstream 706427 73726127 ~ 73731840 (+)
copb1 copb coding downstream 714097 73733797 ~ 73741617 (+)
G542994 NA non-coding upstream 32110 72987256 ~ 72987462 (+)
G542916 NA non-coding upstream 167472 72851648 ~ 72852100 (+)
G542906 NA non-coding upstream 186841 72832504 ~ 72832731 (+)
G542843 sdhaf2 non-coding upstream 193140 72823236 ~ 72826432 (+)
G542905 NA non-coding upstream 198601 72819924 ~ 72820971 (+)
G543009 NA non-coding downstream 8500 73028200 ~ 73028554 (+)
G543012 NA non-coding downstream 11827 73031527 ~ 73031864 (+)
G543013 NA non-coding downstream 12416 73032116 ~ 73032334 (+)
G543014 NA non-coding downstream 12811 73032511 ~ 73032760 (+)
G543016 NA non-coding downstream 15414 73035114 ~ 73035455 (+)
G542890 NA other upstream 252721 72765681 ~ 72766851 (+)
saa saa other upstream 352700 72665460 ~ 72666872 (+)
G542100 LOC106587475 other upstream 867178 72151020 ~ 72152394 (+)
G542053 NA other upstream 917098 72101380 ~ 72102474 (+)
G541903 NA other upstream 1215110 71800040 ~ 71804462 (+)
G544565 NA other downstream 1268078 74287778 ~ 74288138 (+)
G545485 NA other downstream 2218100 75237800 ~ 75238164 (+)
G545601 NA other downstream 2402161 75421861 ~ 75422752 (+)

Expression



Co-expression Network