LOC118965100


Basic Information

Item Value
gene id LOC118965100
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 74313636 ~ 74313690 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052433.1
GAAAATTTGCTCTTTTAGTATTTGTCTAGTAGGTTTCCTCAGACAGGAAGCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052433.1 True 55 mRNA 0.42 1 74313636 74313690

Neighbor

gene id symbol gene type direction distance location
LOC118965099 NA coding upstream 2241 74311341 ~ 74311395 (+)
LOC118965098 NA coding upstream 4542 74309040 ~ 74309094 (+)
tub LOC106587536 coding upstream 421858 73793635 ~ 73891981 (+)
rras2 rras2 coding upstream 524393 73744899 ~ 73789243 (+)
copb1 copb coding upstream 572019 73733797 ~ 73741617 (+)
LOC118965101 NA coding downstream 2211 74315901 ~ 74315955 (+)
LOC118965102 NA coding downstream 4511 74318201 ~ 74318255 (+)
LOC118965103 NA coding downstream 6394 74320084 ~ 74320138 (+)
ipo7 LOC106562356 coding downstream 31644 74345334 ~ 74362749 (+)
LOC118965113 NA coding downstream 41739 74355429 ~ 74355606 (+)
G544521 dennd5a non-coding upstream 14118 74298879 ~ 74299518 (+)
G544571 NA non-coding upstream 17784 74295358 ~ 74295852 (+)
G544569 NA non-coding upstream 20379 74292947 ~ 74293257 (+)
G544568 NA non-coding upstream 21978 74291386 ~ 74291658 (+)
G544567 LOC106587543 non-coding upstream 22436 74290978 ~ 74291200 (+)
G544580 NA non-coding downstream 652 74314342 ~ 74316857 (+)
G544586 NA non-coding downstream 11220 74324910 ~ 74325244 (+)
G544591 NA non-coding downstream 19912 74333602 ~ 74333932 (+)
G544754 NA non-coding downstream 152134 74465824 ~ 74466025 (+)
G544756 LOC105416325 non-coding downstream 153937 74467627 ~ 74467972 (+)
G544565 NA other upstream 25498 74287778 ~ 74288138 (+)
LOC100136290 sox6 other upstream 925949 73190979 ~ 73392251 (+)
LOC110526543 LOC106587517 other upstream 1168289 73037953 ~ 73182742 (+)
G542890 NA other upstream 1546785 72765681 ~ 72766851 (+)
saa saa other upstream 1646764 72665460 ~ 72666872 (+)
G545485 NA other downstream 924110 75237800 ~ 75238164 (+)
G545601 NA other downstream 1108171 75421861 ~ 75422752 (+)
G546464 LOC106562315 other downstream 1614538 75928228 ~ 75970674 (+)
LOC110526968 fto other downstream 2573742 76827001 ~ 77038395 (+)
G547884 NA other downstream 2964302 77277992 ~ 77279354 (+)

Expression


Co-expression Network