ipo7 (LOC106562356)


Basic Information

Item Value
gene id ipo7
gene name LOC106562356
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 74345334 ~ 74362749 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021607636.2
CGGGTACTTCATTCACTTCTTCCTTTCGCGCCGGTAACTGAAGAGCCGTGCGTCCATGTGCGCATTGACTGGGAATTCATAGACCACAGAAATACTGAATCCGAGCCATACCAGATTTAGCTATGGATCCAAACGTATTAATCGAGGCCCTTCGGGGTACCATGGACCCAAACTTGCGTGAGGCCGCGGAGAGACAGCTGAACGAGGGTCACACCCAGGTGAATTTTGTGTCAGCTCTGCTGCAAGTCACCATGTCTGATCAGTTAGATTTGCCCGTCAGACAAGCAGGGGTGATCTACCTGAAGAACATGGTGACCCAGCACTGGAGCGAGGGGGACGGCACCAGCACGGAGACGCCTGTCAATAACATcccagaggaggacaggcagTTCATCCGTGACAACATCGTGGAGGCCATCATCCACTCCCCCGAGCGCATCAGAGTGCAGCTGACAACATGCATCCACCACATGATTAAACACGACTACCCCGGCAAGTGGACTGCCATCGTGGACAAGATTGGCTTCTACCTGCAGTCAGATAACAGCGCCGGCTGGCTGGGCATCCTGCTCTGCCTCTACCAGCTGGTTAAAAACTATGAGTACAAGAAGCCAGACGAGCGCAGTCCTCTGGTGGCGGCCATGCAGATCTTCATGCCCATGCTGAAGGACCGCTTCATCCAGCTGCTCCCTGACCCCTCCAGTGAATCTGTCCTGGTGCAAAAACAGATCTTCAAGATCCTCTACGCCCTCTTCCAGTATAACCTCCCCCTGGAGCTGATCAACCGACAGAACCTGACGGAATGGATGGAGATCCTGAAGACAGTGGTGGACAGAGACGTGCCTCCGGAGACCTTGCAGGTGGATGAGGATGAGAGACCTGAGCTGCCCTGGTGGAAGTGTAAGAAGTGGGCCCTCCACATCCTGGCCAGGCTCTTTGAGAGGTATGGTAGCCCAGGCAACACTACCAAAGAGTACACAGAGTTTGCCGATCTCTTCCTCAAGGGATACGCAGTGGCAGCACAACAGGTGCTGCTGAAGGTCTTATATCAGTACAAGGAGAAGCAATACGTGGCTCCCAGAGTCCTCCAGCAGACACTCAACTATATTAACCAGGGAATCGCACACGCTGTCACCTGGAAGAACCTTAAGCCACATATCCAGGGTATCATTCAGGATGTGGTTTTCCCCCTCATGTGCTACACGGACAGTGACCAGGAGTTGTGGGAGGAGGACCCATACGAGTACATTCGCATGAAGTTTGATGTGTTCGAGGATTTCATCTCTCCCACCACGGCAGCTCAGACCCTGCTCTTCACCTCCTGCAACAAGAGGAAAGAAGTTCTTCAGAAGACCATGGGCTTCTGTTATCAGATCCTCACTGAGCCCACCTCTGACCCCAGGAAGAAGGACGGAGCGCTGCACATGATTGGCTCTCTGGCTGAAATCCTGCTCAAGAAAAAGGTCTATAAAGACCAGATGGAGTTCATGCTGCAGAACCACGTCTTCACTCTGTTCCGCAGTGAGCTGGGCTATATGAGAGCCAGAGCCTGTTGGGTCCTGCATTACTTCTGTGAGGTCAAGTTTAAGAGTGACCAGAACCTGCAGACAGCCCTGGAGCTGACCCGCCTCTGCCTGATCAACGACAACGAGATGCCTGTTAAAGTGGAGGCAGCCATCGCTCTGCAGGTCCTCATCAGCAACCAGGAGAAAGCCAAAGAGTATATCACTCCCTTCATCCGGCCTGTGATGCAGGCCCTCCTGCACATTGTGCGTGAAACGGAGAACGATGACCTCACTAACGTCATCCAGAAGATGATCTGCGAGTACAGCGAAGAGGTCACGCCCATCGCCGTGGAGATGACACAGCACttgGCGATGACCTTCAACCAGGTCATCCAGACGGGGCCTGACGAGGAGGGAGGGGACGACAAGGCGGTGACAGCCATGGGCATCCTCAACACTATCGACACACTGCTCAGTGTGGTGGAGGACCACAAAGAGATCACCCAGCAGCTGGAGGGTATATGTCTGCAGGTGATTGGCACCGTCCTGCAGCAGCATGTCCTGGAGTTCTACGAGGAGATCCTGTCTCTGGCACACAGCCTGACCTGCCAGCAGGTGTCCCAACAGATGTGGCAGCTCCTCCCCTTGGTGTTTGAGGTCTTCCAGCAGGATGGCTTTGACTACTTCACAGACATGATGCCTCTCCTTCACAACTACGTCACGGTTGACACAGACACTCTCCTGTCTGACACTAAATACCTGGAGATAATCTACAGCATGTGCAAGAAGGTTCTGACTGGCGATCCAGGTGAGGATCCAGAGTGTCATGCAGCCAAGCTGTTGGAGGTTGTTATTCTGCAGTGCAAAGGGCGCGGAATTGATCAGGTTGTTCCCTTGTTTGTGGCGGCTGCGCTGGAGAGGCTGACGAGGGAGGTGAAGACCAGTGAGCTGAGGACCATGTGTCTGCAAGTGGCCATTGCAGCCCTGTACTACAGCCCCCCTCTGCTGCTCAACACCCTGGAGAACCTGCGCTTCCCAAACAACACTGAGCCCATCACCAACCACTTCATCTCCCAGTGGCTCAAAGATGTTGACTGCTTCCTGGGGCTCCATGATAGGAAGATCTGCGTGCTTGGCCTGTGTGCCCTCATTGACTTGGAGCAGAGGCCCCAGGCTGTCAACCAGGTGGCCGGCCAACTGCTTCCCGCAGCCATCCTGCTCTTCAACGGCCTCAAGAGGGCCTACGCCTGTCAAGCAGAGAATGAGAATgaggatgaagatgatgatgaagatggagaggaggatgaggagaatgTTGAGCTGGGCAGTGATGAGGATGACATTGATGAGGAGGGCCAGGAGTACTTGGAGATGTTGGCCAAGCATGCAGGAGAGGATGGGGATGATGAGGACTGGGATGAGGACGACGCAGAGGAGACTGCACTGGAGGGCTACACTACAGCTGTAGACGACGAAGACAACCTGGTGGATGAATACCAGATCTTCAAGGCCATACTACAGAATATCCAGACCCGTGACCCAGCATGGTACCAGGCACTCACACAAACCCTTGATGAGGAACAAGGAAAACACCTTCATGACATTGGCACACTTGCAGACCAGAGACGGGCAGCACATGAATCCAAAATGATCGAGAAGCATGGCGGATACAAGTTCACAGTGCCAGAAGTGGTGCCAACTAATTTCAACTTTGGAGGCAACGCTCCAGGAATGAATTGAGTCGTCCCTTCTCCCTTTTATTACTCTGACTGATTGTAGTGAAGTGAAAAAAGCTTGTGTTGTTCCCTTAAGTAGTGGTTCCAGAACTGGTTCTTCTCACTGACTCTTCAATCTGACTATCAAATTGGAAATAGCACCAGAAGAAGTGGGAAGACAACCAAATGCAACAAATGGCTGGGAAAACAAACCAAGAACTTGAGCTTGAAGCAAGATGAAAAAATCAGCTCTAAACAACATTGTCTTCTGGGATCCACTGTGGAGGATACTAGGACGGGGACTTCCTTTTTTTTCTTCCCACTTAAACAAAACGGGAGGGCTTAACAATTTGAAATTGATAACGGGACTAAATGTTTCATCATTTTCACTGTTTTGGccaaaaggctgtgcgtgataaGATTATACCTCTGGCAGTAGTGTTGTCTACGTTATTTTCTGCAGTAACAAATTCTCATGTTTGTTATGTATATACAAGCCAAGGTTCTTGATTTTTAAGTAGCCTTGTTAAAACAACCAGAGGTATTTGTAAGGTGTCAAGTGTATTCATATGTAGCATATTGGATACTTCATAGCACTATGTGATGCCTGATCTCTGTAAATTAATGACTAGCACTTTCATATTGTTCAGGTCTCCTAGCCTTCTGTATCAGACTGCAATTTTTAAATCAATTAAGACCATTTAAAACACAAACCGCTGTAACTTTGGTTACGGTGTAGAATAATGAGTGGCATCACTTTGCTGCTAAAGTGGAAACATTCTTGATTCCTAAAAAAAGAATGCTCTTGGTGTTCAGTTTCGATACAAGACGTGTTGTGAGCACTGAAAGTCAATTGGATACTTCATTGAAGCATGTACAATTGGACTTGATCGTGAAGGTCTCAAGCATTTGGTTGGTGTATGGAtgaaccatatatatatatacacacacaccaatataTTAAAAAAAGTTAAGTTGGATTGCATGCATGTGACTGTTTACTAACAGCTACACAGTTGTGCACTCAGTCATTTGAGTTGGAGCCTATATTTGAGTGAATTGTCTGTATACTCTGTCAGATCAGGTGATATGTAGTCTATTTAGAACTATGCTGCCAGCTAATTATAATTCTAGTTCATTTGCTACTACG

Function

NR:

description
importin-7-like

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K20223 IPO7, RANBP7; importin-7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021607636.2 True 4370 mRNA 0.50 24 74345334 74362749

Neighbor

gene id symbol gene type direction distance location
LOC118965103 NA coding upstream 25196 74320084 ~ 74320138 (+)
LOC118965102 NA coding upstream 27079 74318201 ~ 74318255 (+)
LOC118965101 NA coding upstream 29379 74315901 ~ 74315955 (+)
LOC118965100 NA coding upstream 31644 74313636 ~ 74313690 (+)
LOC118965099 NA coding upstream 33939 74311341 ~ 74311395 (+)
LOC110526565 LOC106562357 coding downstream 366 74363115 ~ 74378029 (+)
LOC110526567 wee1 coding downstream 27033 74389782 ~ 74395037 (+)
LOC110526568 LOC106587550 coding downstream 32619 74395368 ~ 74430677 (+)
LOC110526569 LOC106562354 coding downstream 80388 74443137 ~ 74463814 (+)
LOC110526570 cyp1a3 coding downstream 142295 74505044 ~ 74509032 (+)
G544591 NA non-coding upstream 11402 74333602 ~ 74333932 (+)
G544586 NA non-coding upstream 20090 74324910 ~ 74325244 (+)
G544580 NA non-coding upstream 28477 74314342 ~ 74316857 (+)
G544521 dennd5a non-coding upstream 45816 74298879 ~ 74299518 (+)
G544571 NA non-coding upstream 49482 74295358 ~ 74295852 (+)
G544754 NA non-coding downstream 103075 74465824 ~ 74466025 (+)
G544756 LOC105416325 non-coding downstream 104878 74467627 ~ 74467972 (+)
G544757 NA non-coding downstream 105515 74468264 ~ 74468808 (+)
G544758 NA non-coding downstream 107233 74469982 ~ 74470458 (+)
G544761 NA non-coding downstream 117409 74480158 ~ 74480412 (+)
G544565 NA other upstream 57196 74287778 ~ 74288138 (+)
LOC100136290 sox6 other upstream 957647 73190979 ~ 73392251 (+)
LOC110526543 LOC106587517 other upstream 1199987 73037953 ~ 73182742 (+)
G542890 NA other upstream 1578483 72765681 ~ 72766851 (+)
saa saa other upstream 1678462 72665460 ~ 72666872 (+)
G545485 NA other downstream 875051 75237800 ~ 75238164 (+)
G545601 NA other downstream 1059112 75421861 ~ 75422752 (+)
G546464 LOC106562315 other downstream 1565479 75928228 ~ 75970674 (+)
LOC110526968 fto other downstream 2524683 76827001 ~ 77038395 (+)
G547884 NA other downstream 2915243 77277992 ~ 77279354 (+)

Expression


Co-expression Network